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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0432800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:13969460:13971406:-1 gene:Os11g0432800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os11t0432800-01)
Sequence

ATGTGCTCGCTTCTCCTCCCCGCGTCGCACTGCCTTCCTCATCCCGCACGCACCAGCCAC
GCCGCGGAGCCGCGCGTCTGTAGCGTCGGCTGCAGGTATCGCGAGATGGAGATATGCGCC
GGGAGCCCTAGCGCCATGCTGGCCTCAACCGCCCCTACAATGGCCTTCGCTGCCTCCCCT
CCCCTCTCCTCCCTCGCCGCTGCCGCCGCCGTGATCTCCTCCTCCTCCCCATCAAAACCC
CTCTCACGAGCAAAGACCCCTCCACCAGCTCTCCTCCAGGCTATTCTCCCCACTGCCCCC
CCCAAACACCATTCCCTCTCCTGCTCTGGGTCACAAGCCCCACGTGCCACCACAGGCGAA
GGATCGGCCGTGGGGGACCGCGGGAGCGGCTCCGGAGGAAACAACGGCAAGGGTGGCGGC
GGCGACGGCGATGGCGGCGACAACGACTATGAGGAGGCCGAGTTCGGGCCCCTGCTCGGG
TTCGATGAGGTGCTGCGCCTCACCGCGGCATGCGGTGTCTCGCTCCCGGCCGACATGATG
GGGGCGGCCAAGGATGCTAGCATCCGGGAAGTCATGTTGCTCCACCACTTCGATCTGCAG
GCAGCACCATGGCCTCTAGCCGCGATGATCCGGGCATTCTTGATGCTCCGCAACTGA

Peptide Sequence

PEP ID

Os11t0432800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:13969460:13971406:-1 gene:Os11g0432800 transcript:Os11t0432800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os11t0432800-01)
Sequence

MCSLLLPASHCLPHPARTSHAAEPRVCSVGCRYREMEICAGSPSAMLASTAPTMAFAASP
PLSSLAAAAAVISSSSPSKPLSRAKTPPPALLQAILPTAPPKHHSLSCSGSQAPRATTGE
GSAVGDRGSGSGGNNGKGGGGDGDGGDNDYEEAEFGPLLGFDEVLRLTAACGVSLPADMM
GAAKDASIREVMLLHHFDLQAAPWPLAAMIRAFLMLRN

Transcript Sequence

Transcript ID

Os11t0432800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:13969460:13971406:-1 gene:Os11g0432800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0153E02-OSIGBa0093I20.13 protein. (Os11t0432800-01)
Sequence

AAGCCCAGCCCACATTTCTTTCCTGGTTTCTCCCCATCCGCATCGCTCACAGCCGCTGCC
GCCGCCGGACGCGGTCGCTTCCCCTCCCCCGCCCGCATGCGTGCGTGCCAGCTGCGCAGC
GGGCCCGCTAGCCGGCGCACTCGCTTCTCCTTCTCCCCTGCGCATGTGCTCGCTTCTCCT
CCCCGCGTCGCACTGCCTTCCTCATCCCGCACGCACCAGCCACGCCGCGGAGCCGCGCGT
CTGTAGCGTCGGCTGCAGGTATCGCGAGATGGAGATATGCGCCGGGAGCCCTAGCGCCAT
GCTGGCCTCAACCGCCCCTACAATGGCCTTCGCTGCCTCCCCTCCCCTCTCCTCCCTCGC
CGCTGCCGCCGCCGTGATCTCCTCCTCCTCCCCATCAAAACCCCTCTCACGAGCAAAGAC
CCCTCCACCAGCTCTCCTCCAGGCTATTCTCCCCACTGCCCCCCCCAAACACCATTCCCT
CTCCTGCTCTGGGTCACAAGCCCCACGTGCCACCACAGGCGAAGGATCGGCCGTGGGGGA
CCGCGGGAGCGGCTCCGGAGGAAACAACGGCAAGGGTGGCGGCGGCGACGGCGATGGCGG
CGACAACGACTATGAGGAGGCCGAGTTCGGGCCCCTGCTCGGGTTCGATGAGGTGCTGCG
CCTCACCGCGGCATGCGGTGTCTCGCTCCCGGCCGACATGATGGGGGCGGCCAAGGATGC
TAGCATCCGGGAAGTCATGTTGCTCCACCACTTCGATCTGCAGGCAGCACCATGGCCTCT
AGCCGCGATGATCCGGGCATTCTTGATGCTCCGCAACTGAATGTTAGCGGACCCATCATT
CCTCTTCAAATTTGGAACCAAGGTTGTGATTGACTCGTGCTGCGCTACGTTTGCGGAGGT
GTTTGAGCTGTACGATCCATGGACAGATATGCACGCTACGGGATTCATGGATACAGCCAT
CACCCCCAGTTTCCATTCTCTTATCCTGCACAGTTCATTGGATGACATATTTGTGATTCC
AAAAGAGTAATAGAGGGTTTGTGTTTAGGTGTTCCAGCAATTGATGCGAATGTCAAAATT
TATCTGCTTTGCGTCCACTTAACTCTTACTTCAGTTCTTTCTTTTACATGTAAATATTGG
TTGCATAAAATCTATTTTTGGTTGTTTACGAGTTTACCGACATTCTGAAATCGTAAACTG
TAGGGATTTTTCATTTTGTTCTTACCATTGTGACTTATCTTATCAATCTTTTGTCTCAGC
CTTTTAGGTCTGAATTAAACGCAGAGAGTTGGAACAGTCAAGACATCAAGTAGTAGCAGA
TTATCACTACGTTTCAAGGTGTTCCAGAAATCCTGACACAAGATCAAATTTATAATTCTG
ATTAAGCACTGTAGCACATCATCACCATTAGTTGTTTGGCACATCGTCTTATCTATTACT
GAAGGTTGCATATATTCTGATCCTGTATTACCTGATTATTCTTTTCTGCGAATTTCTAAA
TAATATTTATTGTGTTCGTGGTT