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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0428800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:13723177:13724624:1 gene:Os11g0428800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 35 description:Cupredoxin domain containing protein. (Os11t0428800-01)
Sequence

ATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTTGCTGGCCCTTGCGTTTTCGACC
ACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAACGGTTGGGACTTCTCTGTGTCG
TTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGGTGACACTCTTGTTTTCAACTAC
AAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGCGACGTACAGGAGCTGCAAGGTG
GGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGACCGCGTCGTTCCTCCTCAAGAAG
GGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTGCGCCGCCGGGATGAAACTCCGG
GTCGTCGCCAACTGA

Peptide Sequence

PEP ID

Os11t0428800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:13723177:13724624:1 gene:Os11g0428800 transcript:Os11t0428800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 35 description:Cupredoxin domain containing protein. (Os11t0428800-01)
Sequence

MGKYSVGLVVLGLLALAFSTTVLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNY
KPGAHNVLAVDAATYRSCKVGSSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLR
VVAN

Transcript Sequence

Transcript ID

Os11t0428800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:13723177:13724624:1 gene:Os11g0428800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 35 description:Cupredoxin domain containing protein. (Os11t0428800-01)
Sequence

ATGCACATTCAGATAGATCATATCAGACAAGTAAATCTAGCTTGCTGTAAACACAGTTAG
TTCGTAATTATCGCATAGGGCCATGGGGAAGTACAGTGTGGGTCTCGTGGTTTTAGGGTT
GCTGGCCCTTGCGTTTTCGACCACTGTGCTGGCTGAAACACATGTTGTTGGTGACTCCAA
CGGTTGGGACTTCTCTGTGTCGTTTGATAGCTGGGCTGATGGAAAGGTCTTCGCTGCTGG
TGACACTCTTGTTTTCAACTACAAACCGGGCGCACACAACGTGCTGGCCGTGGACGCGGC
GACGTACAGGAGCTGCAAGGTGGGCAGCTCGGCGGACTCGGTGGCGGCGGCGACGGGGAC
CGCGTCGTTCCTCCTCAAGAAGGGCGTCAACTACTACATCTGCGGCGTCCCCGGCCACTG
CGCCGCCGGGATGAAACTCCGGGTCGTCGCCAACTGATGAAACTCCGGCGACAGATCAAT
CCCTTAATTAATTAAAACTATGTGGGTGTCTCTGCAGCCTGAAGCAGCATATAGCTTGCT
CGGTTTAGGGATTGGTCGCGTATATATAGTTGTAATTGTAGCCCTATGTACTGGAGTGGC
TGACACTGGGTCTGTCATGCTCCTGCATCTGCATGCGTGCATGGCTGCATGCTATATATC
AGCTTTGTGCGTTCTAAATAATGGCCCGAATGTGCACCTGTGTGGCTGTGTGGCTGTTTG
TTGGAACTTGGAAGTACTTATATATAATATATAGTTCCCTTC