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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0428700-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:13719439:13720479:1 gene:Os11g0428700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0428700-00)
Sequence

CTTGCAGCGTCAGAGGAGGAGGGTGCAGGGACGTTGCCCGAGTGCCTGGAGACGCTACTG
TCGACGCGCTTCTTCTTGGCGTGCGGGGCGCACCCGGCGTCGCCGCGAATGAGTGCCACA
TCTTCTGCCTCGATCCTCGACTACCCTTCCCCTTCCCCGCCCTTTTGCTACTACTGCCAC
TCCCACAGACACCAATCCCACCGTGTTATCCAGATACGGCGTTCTTCCTACAATGATGTG
GTGCGGGTGACGGAGGTGGAGGATGTCCTCGACATCTCCGGCGTCCAGACCTACGTCATC
AACAGCGCCAAGGTCCTCTTCCTCAACGAGCACCCCCAGCCACGCGACGCCAGCACCGTT
GTCGGCGAGGCCGCCGCCTCCCCTTACAACTGCTAG

Peptide Sequence

PEP ID

Os11t0428700-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:13719439:13720479:1 gene:Os11g0428700 transcript:Os11t0428700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0428700-00)
Sequence

LAASEEEGAGTLPECLETLLSTRFFLACGAHPASPRMSATSSASILDYPSPSPPFCYYCH
SHRHQSHRVIQIRRSSYNDVVRVTEVEDVLDISGVQTYVINSAKVLFLNEHPQPRDASTV
VGEAAASPYNC

Transcript Sequence

Transcript ID

Os11t0428700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:13719439:13720479:1 gene:Os11g0428700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0428700-00)
Sequence

TCCTTCCTTCTTCCTCCTCGCTCTCTCCCTTCTCTCTCTTTCTCTCCCCTTCTTCTTCCC
CTTTGGCCGTGCTTAACTCCGCGTCCGGGTTGGAATCCTTGGCGGCGGGTCCGGCCTACT
CCCACCTACCGCCGTCCTTCGCCGCTTCCTCTGCCACCACTGCTGCGGGCTCGCCTTCAC
CACCCTAGCTTGCAGCGTCAGAGGAGGAGGGTGCAGGGACGTTGCCCGAGTGCCTGGAGA
CGCTACTGTCGACGCGCTTCTTCTTGGCGTGCGGGGCGCACCCGGCGTCGCCGCGAATGA
GTGCCACATCTTCTGCCTCGATCCTCGACTACCCTTCCCCTTCCCCGCCCTTTTGCTACT
ACTGCCACTCCCACAGACACCAATCCCACCGTGTTATCCAGATACGGCGTTCTTCCTACA
ATGATGTGGTGCGGGTGACGGAGGTGGAGGATGTCCTCGACATCTCCGGCGTCCAGACCT
ACGTCATCAACAGCGCCAAGGTCCTCTTCCTCAACGAGCACCCCCAGCCACGCGACGCCA
GCACCGTTGTCGGCGAGGCCGCCGCCTCCCCTTACAACTGCTAGATCTGCGCCCTCGACC
TCCTCGACCCATTCCGCTTCTGCTCCCTTGGTTGCAAACTGGTGGACACCAAGACGGGTG
CCCGCGGGGCCACCGTGCAGGCCGACGAGGTGACCATGACGATGCCGCCGCCGGTGGCAG
CAGCGAGA