Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0424400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:13377937:13379488:-1 gene:Os11g0424400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0424400-01)
Sequence

ATGACATCGTCGACGCTGTCTTCAGCGCTGAGCTCCATGGAGGTGATGCTGGATGCGCTC
ATGCAGAGAGGAGTAGGAAAGCCGGAGGAAAAGCCCAAGGAGGAGGCGCCTCCAGCGCTG
CCCACACGCCCCACGGTGAGGGGCAGGCCGCCATCTCTGCAGAGGCCTGGTTCCCCTCCC
CCTTGGGTTCACCGGTCACCATCGTTACCGCCTATGCTGGAAGTGGACGAGAAACTTGCG
GTCAATTCGGTGCTGGAAAGAAGGGCCACGGTGGCGGAAGAGGCGGTAAAGCAGAAGGAC
GACGTGGTGAGGCAGAAAGATGAGGAGATAGCCGCGCTGAGGCAACAGGTTGAGCACTAC
GAATCCCGGCTCTCGGAATGCGAGGCGAGGATGAAATCCGTGGAGGAGGAGCTGCGGAAA
CAGATCACCACGATGCAGATCGCTCAGAACAACGCTGGAAGAACCGGTGAATCGACGACA
AGGACGCACCACAGGCAGGAACTATCAGGCACTAGTGGTGCTCCTGCTCAGTCGTCAGGG
TGGCGAGAGGAGGAAGCATCGGTGACGCGGCAACAGGCTCGTGGCCGCGAATCGAACGTT
GCTGCAGTCGTCGACGAAAGGAAAACCGATGCCGTGAGCCGCTTGGCCACGGAGCTCCGG
CAGGAGAGCGAGGCGTTCGAGCACCGCGCGCGTGCGGTGACCGAAGCGGGACCGCCGACT
GCCAAGTCGGTCGACGAGCTCAAGAAGCTGAAGCGGCAGTTCGGGACGTGGAAGAAGGAA
TACGGGGCCCGTCTGCGTAAGACCAAGGCCGAGCTGAAGAAGCTCGTCCGCTCGGAGAGG
GGTGGCCACGGGAACCGCCGCAGGTGCTGCTCGTGGAAGATCAAGCTGCCGAAGTGCAGG
TTTCCCAAGTGCTGCGCGTTCAAGCTTCCAAGCCCTTCCTCTTGCTGTTCCTGCAGTTGC
TTCCGCCGCTGCTGCTAG

Peptide Sequence

PEP ID

Os11t0424400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:13377937:13379488:-1 gene:Os11g0424400 transcript:Os11t0424400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0424400-01)
Sequence

MTSSTLSSALSSMEVMLDALMQRGVGKPEEKPKEEAPPALPTRPTVRGRPPSLQRPGSPP
PWVHRSPSLPPMLEVDEKLAVNSVLERRATVAEEAVKQKDDVVRQKDEEIAALRQQVEHY
ESRLSECEARMKSVEEELRKQITTMQIAQNNAGRTGESTTRTHHRQELSGTSGAPAQSSG
WREEEASVTRQQARGRESNVAAVVDERKTDAVSRLATELRQESEAFEHRARAVTEAGPPT
AKSVDELKKLKRQFGTWKKEYGARLRKTKAELKKLVRSERGGHGNRRRCCSWKIKLPKCR
FPKCCAFKLPSPSSCCSCSCFRRCC

Transcript Sequence

Transcript ID

Os11t0424400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:13377937:13379488:-1 gene:Os11g0424400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0424400-01)
Sequence

GCAACGAACCTAGGAACAGGCAGGCAGGCAGCGTCGGCGAGGCCGTTGGGCAACGCCTCG
CCACCACATGATTTCGCCTGCCTGTTGTTCTTCGGGCCTCCCCTTCTCCTCCACCCTGAC
TACATCAAATTTCAACCCTGACTCCATCAAATTTCATGGACAAATGAAGCTGGATTACAT
GCACGCAGGAGGCGCGCGCATCGGCGTAACGTCTCCTTGGCGTTGAGGGCTTGAGCTCGT
GGCAAGCGATGACATCGTCGACGCTGTCTTCAGCGCTGAGCTCCATGGAGGTGATGCTGG
ATGCGCTCATGCAGAGAGGAGTAGGAAAGCCGGAGGAAAAGCCCAAGGAGGAGGCGCCTC
CAGCGCTGCCCACACGCCCCACGGTGAGGGGCAGGCCGCCATCTCTGCAGAGGCCTGGTT
CCCCTCCCCCTTGGGTTCACCGGTCACCATCGTTACCGCCTATGCTGGAAGTGGACGAGA
AACTTGCGGTCAATTCGGTGCTGGAAAGAAGGGCCACGGTGGCGGAAGAGGCGGTAAAGC
AGAAGGACGACGTGGTGAGGCAGAAAGATGAGGAGATAGCCGCGCTGAGGCAACAGGTTG
AGCACTACGAATCCCGGCTCTCGGAATGCGAGGCGAGGATGAAATCCGTGGAGGAGGAGC
TGCGGAAACAGATCACCACGATGCAGATCGCTCAGAACAACGCTGGAAGAACCGGTGAAT
CGACGACAAGGACGCACCACAGGCAGGAACTATCAGGCACTAGTGGTGCTCCTGCTCAGT
CGTCAGGGTGGCGAGAGGAGGAAGCATCGGTGACGCGGCAACAGGCTCGTGGCCGCGAAT
CGAACGTTGCTGCAGTCGTCGACGAAAGGAAAACCGATGCCGTGAGCCGCTTGGCCACGG
AGCTCCGGCAGGAGAGCGAGGCGTTCGAGCACCGCGCGCGTGCGGTGACCGAAGCGGGAC
CGCCGACTGCCAAGTCGGTCGACGAGCTCAAGAAGCTGAAGCGGCAGTTCGGGACGTGGA
AGAAGGAATACGGGGCCCGTCTGCGTAAGACCAAGGCCGAGCTGAAGAAGCTCGTCCGCT
CGGAGAGGGGTGGCCACGGGAACCGCCGCAGGTGCTGCTCGTGGAAGATCAAGCTGCCGA
AGTGCAGGTTTCCCAAGTGCTGCGCGTTCAAGCTTCCAAGCCCTTCCTCTTGCTGTTCCT
GCAGTTGCTTCCGCCGCTGCTGCTAGCCACGCAAGATTGCAGACGCTTGGTTTGCTTCTT
CTACTTGTACATCGTTGTAAAATTGTTGGGGGTGATCGAATTGACAAAAGGAACAAAACG
AAATATGACCATAGCTAGAT