Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0421800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:13200164:13202462:-1 gene:Os11g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0421800-01)
Sequence

ATGAAGGAGAGGGTGAGGCGGCGGCGCATCCCGGCGTTCGGGGAGTGGAACTACGACGGC
GACGGCGACCTTGGCGGTGGCGGCGGCTGCTATGGCTACGGCTACCGCGACGGCGACTGG
CCGGTCACACAGTACTTCGACTCCGCCATGCAGGCCCGCGGCCTGGTCATCTCCCTGCCG
CCCTCACCAAAACCACCCAAGAAGGCGGTGAAGTGGATTGACAGCGGCGCACTTGGGGAG
GAGGAGGTGGTGGACGAGAAGCAGAGGCAGAGGCAGCACAAGGTGGTGGTGGGGCTGGCG
GTGGCAGGAGGAGAGCACGGGGCGGCGAGGAAGCAGGGGAAGCAGAGCAGAGTGGCTGAC
GGCGGGGCCCATGCGGCGATGGGCTACAAGGGGTGCAGGCCGGCGGTGGTCAAGGCCGTG
GACCGGGACCTCTACGAGATCCCACCCGACATGCTCTGCAACAAGCCAAGGAAGAGGGTG
ACCAGGAGCCTGTGGATGGGGTGCCTGGGACTCAGCTGCGTTGCCTAG

Peptide Sequence

PEP ID

Os11t0421800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:13200164:13202462:-1 gene:Os11g0421800 transcript:Os11t0421800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0421800-01)
Sequence

MKERVRRRRIPAFGEWNYDGDGDLGGGGGCYGYGYRDGDWPVTQYFDSAMQARGLVISLP
PSPKPPKKAVKWIDSGALGEEEVVDEKQRQRQHKVVVGLAVAGGEHGAARKQGKQSRVAD
GGAHAAMGYKGCRPAVVKAVDRDLYEIPPDMLCNKPRKRVTRSLWMGCLGLSCVA

Transcript Sequence

Transcript ID

Os11t0421800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:13200164:13202462:-1 gene:Os11g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0421800-01)
Sequence

CAAGTGCTCATCAACACCGCCTGACTCATCCAGTGTGAGGCCGTGAGGGTGAGTGAACCC
TGTAGCGGCAGTCATGAAGGAGAGGGTGAGGCGGCGGCGCATCCCGGCGTTCGGGGAGTG
GAACTACGACGGCGACGGCGACCTTGGCGGTGGCGGCGGCTGCTATGGCTACGGCTACCG
CGACGGCGACTGGCCGGTCACACAGTACTTCGACTCCGCCATGCAGGCCCGCGGCCTGGT
CATCTCCCTGCCGCCCTCACCAAAACCACCCAAGAAGGCGGTGAAGTGGATTGACAGCGG
CGCACTTGGGGAGGAGGAGGTGGTGGACGAGAAGCAGAGGCAGAGGCAGCACAAGGTGGT
GGTGGGGCTGGCGGTGGCAGGAGGAGAGCACGGGGCGGCGAGGAAGCAGGGGAAGCAGAG
CAGAGTGGCTGACGGCGGGGCCCATGCGGCGATGGGCTACAAGGGGTGCAGGCCGGCGGT
GGTCAAGGCCGTGGACCGGGACCTCTACGAGATCCCACCCGACATGCTCTGCAACAAGCC
AAGGAAGAGGGTGACCAGGAGCCTGTGGATGGGGTGCCTGGGACTCAGCTGCGTTGCCTA
GGGATCTCACCAGATAGATCGATCGATCACACATACCAAACCTGCCTTGTTTTGCGTGTC
GTTGTAAAGTGAAGCAGAAACCCATGGACGGACCCCATCGTGATCGATGCATGCTGTCAC
CACGGTCGCACGGCCCAAACTTTCCCATTCATCTATCTCCCTCACCTGTCTCAGCAGCAC
TAGTGTTTGGTTGGTGTCTCTCTGTGCGTTTTAGGAGTAGTAGTAAAATGAGATGGACAT
GGACATGATGTGTCCGGCAGCGTCATTTCCTCGTGCCAAAGACCACTCGAGTGCTGCCTC
TCTCTCTCTCTCTCTCTCCCCTTTTGATCTTTTTCCGATGTGTTTTTTTTTTGTAGCCTC
TGCTTGGTTGGTGTCCCATGAAATTACGGAGGCAGCTCGGTGAAATGTGGTTATATGGGT
TGGTGCCTTGGTGGACACTCGACACTGATGAGTAGCAGTGGAAAAAGGTTGATGTAATGG
AACGCTGTAGTCTCAGCTCAGGGGACTTGTGCCGCCCGTGGTGAAAAGAAAGAAAGGAAG
AAAGCTTTCTGTTG