Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0416900-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:12811965:12818201:-1 gene:Os11g0416900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER G FAMILY MEMBER 28 description:ABC transporter-like domain containing protein. (Os11t0416900-01)
Sequence	ATGGCCTCTGTGGCGGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTC GCCGCAGCACCCGCGCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGC GACTACGACGATGGGATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGG AGTCCCATCGTAGCCGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCC AAGGCTATTGGCGACAAGCTCGACTACTGCATCAAGGACACCGACAAGGAGTGGAATGCT GCGTTCAATTTCTCCAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGA GACCTGCAGCAGCGTGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATC GACGCCGGGGAGAAGAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTG TCATCCTGGATGGACGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAA ATCAATCTGCAGGATGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGC CCTGGCTTCTTCTGCCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATAC TGCCCGCTGTCCAGCTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCA CCCGCTGGAAATCCGAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGC ACTGACGATATTTTCTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCT TGTAGTAGTGGGTTTTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAG AGCTCTTGTCCACCAAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTG GTTGCCTCCTGTTTAGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAAC CGCGAGAAGAAGCAAGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCG CAAGCTCGAGAGAGGTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTT CAGTCACAATTGTCTCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGT GGCGGCGGCGGCAGCAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAAC CTGACCGACATGATGCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTG GAGATAGGAGACAAGGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGG AGCCAGATCTTCAAGTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAG AACCACAACCTGACCTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACG AGGCCCGTCATCGAGATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAG AAGCTCTTGAGGTCCGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGC CCATCTGGCGCGGGGAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGC GAGACGTCAGGCATGGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGG ATCATTGGCTTTGTCCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAAT CTCTGGTTCAATGCAAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTG GTCGTGGAGAGGGTGATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGG ACAGTGGAACAGCGCGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAA ATGGTGATGGAGCCATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCC TCCTCCCTCCTCCTGCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCC ATGGTTGTTCATCAACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTA GCCAAGGGAGGGATGACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACG GGGCTGGGCATCACCGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTG GAGGGCATCGTCAAGCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGG TGGATGCTGCACAATGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCT GAGTCCTCCTTCCGAGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAG GTATGGGGCAACGTCAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAG AGCACTGAAGATTTGTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTC CTCGGAAGGTGTGGCAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTC ATACTCTGCCTTGCCGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTT GGAGCGCTTGGATACACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCC TTGAGATCATTCGCGCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGC TCTCTCGCCTACTTCATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCC ATAGTCTACCTCTCTATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAAC TACGTCATTCTTGTTGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATC TTCTTTCAGCCAGGCTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTG ATAGCAACTCAGCGGAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTA GAAGGGTTTGTGATGGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGC GGTTCGCTGGTCAAGAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTT ATTGCCAATGGTATAGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAG CACTAG

Peptide Sequence

PEP ID	Os11t0416900-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:12811965:12818201:-1 gene:Os11g0416900 transcript:Os11t0416900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER G FAMILY MEMBER 28 description:ABC transporter-like domain containing protein. (Os11t0416900-01)
Sequence	MASVAAQLVGAALTLLLLSVAAAPARANEVPRLFLQEIASDYDDGIGGTAGDKGAKTIAG SPIVAGVMNDRLKALTSSFAKAIGDKLDYCIKDTDKEWNAAFNFSKDTTFLTNCMKQTNG DLQQRVCTAAEMKFYFNSLIDAGEKSGEINYVRPNKNCNLSSWMDGCEPGWACTVGKEQK INLQDAKDIPYRALDCQACCPGFFCPHGLTCMIPCPLGAYCPLSSLNKTTGICDPYNYQP PAGNPNHSCGGADNWADVVSTDDIFCPPGFYCPSTTQKLPCSSGFYCRKGSTSQTRCYKK SSCPPNSATQDITIFGALLVVASCLVLLIIYNFSGQILTNREKKQAKSREAAARYARETA QARERWKSAKDVAKKAGTGLQSQLSRTFSRKKAAQTPKGGGGGGSSLPPSGEDGGGRKKN LTDMMQSLEDNPDNDEGFNLEIGDKGLRKNMPKGKQMHSRSQIFKYAYGQIEKEKAMQQE NHNLTFSGVISMAKEHDVSTRPVIEIAFKDLTLTLKGSKKKLLRSVTGKLRPGRVAAVMG PSGAGKTTFLSAIAGKATGCETSGMVLINGKVEPIRAYKRIIGFVPQDDIVHGNLTVQEN LWFNARCRLSADMSKADKVLVVERVIESLGLQAVRDSLVGTVEQRGISGGQRKRVNVGLE MVMEPSVLILDEPTSGLDSASSLLLLRALRREALEGVNISMVVHQPSYTLYRMFDDLILL AKGGMTVYHGPVKKVEEYFTGLGITVPERVNPPDYYIDILEGIVKPTMSAGVSVKDLPLR WMLHNGYDVPRDMLQSSSDSESSFRGSTSPASGDASVAAEVWGNVKDIVGQKKDEYDYNK STEDLSNRCTPGILRQYRYFLGRCGKQRLREARIQGVDYLILCLAGICLGTLAKVSDETF GALGYTYTVIAVSLLCKIGALRSFALDKIYYWRERASGMSSLAYFMSKDTIDHLNTIVKP IVYLSMFYFFNNPRSSIWENYVILVALVYCVTGIGYTFAIFFQPGSAQLWSALLPVVLTL IATQRKNTFFADLCYTKWALEGFVMANAQNYSGVWLITRCGSLVKSGYDINDKALCIVVL IANGIVFRCVAFFCMVTFQKH

Transcript Sequence

Transcript ID	Os11t0416900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:12811965:12818201:-1 gene:Os11g0416900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER G FAMILY MEMBER 28 description:ABC transporter-like domain containing protein. (Os11t0416900-01)
Sequence	GCGGCGACCACCACCGTTCCTCTACGAGACTGATCCCGTCGTCGCCATGGCCTCTGTGGC GGCGCAGCTGGTCGGCGCGGCCCTCACGCTGCTGCTCCTCTCCGTCGCCGCAGCACCCGC GCGGGCCAACGAAGTGCCACGCCTCTTCCTCCAGGAGATCGCCAGCGACTACGACGATGG GATCGGAGGCACGGCGGGGGATAAAGGGGCGAAGACCATCGCCGGGAGTCCCATCGTAGC CGGGGTCATGAACGACCGTCTCAAGGCGCTTACCTCCTCCTTTGCCAAGGCTATTGGCGA CAAGCTCGACTACTGCATCAAGGACACCGACAAGGAGTGGAATGCTGCGTTCAATTTCTC CAAGGACACCACCTTCCTCACCAATTGCATGAAGCAGACCAACGGAGACCTGCAGCAGCG TGTCTGCACAGCCGCAGAGATGAAGTTCTACTTCAACAGTTTGATCGACGCCGGGGAGAA GAGCGGGGAGATTAATTATGTCAGGCCCAACAAAAACTGCAATCTGTCATCCTGGATGGA CGGCTGCGAGCCGGGCTGGGCATGCACTGTTGGAAAAGAGCAGAAAATCAATCTGCAGGA TGCTAAGGATATCCCTTACAGAGCTCTTGACTGCCAAGCTTGTTGCCCTGGCTTCTTCTG CCCCCATGGTCTCACTTGCATGATACCTTGCCCTCTGGGTGCATACTGCCCGCTGTCCAG CTTGAACAAAACTACAGGCATCTGTGACCCATACAACTATCAACCACCCGCTGGAAATCC GAATCATTCTTGCGGTGGTGCTGACAATTGGGCAGACGTGGTTAGCACTGACGATATTTT CTGCCCACCTGGATTCTACTGCCCGAGCACGACACAGAAACTCCCTTGTAGTAGTGGGTT TTACTGCAGGAAGGGATCAACCTCACAAACTAGATGCTACAAGAAGAGCTCTTGTCCACC AAACTCTGCTACACAGGACATTACAATATTTGGTGCATTGTTAGTGGTTGCCTCCTGTTT AGTGCTCCTGATCATCTACAACTTCTCCGGCCAAATTTTGACGAACCGCGAGAAGAAGCA AGCAAAATCCCGAGAGGCTGCTGCAAGGTATGCGAGAGAGACTGCGCAAGCTCGAGAGAG GTGGAAATCAGCAAAGGATGTCGCCAAGAAAGCCGGAACGGGTCTTCAGTCACAATTGTC TCGCACCTTCTCACGGAAGAAGGCTGCCCAGACACCGAAAGGTGGTGGCGGCGGCGGCAG CAGCCTGCCTCCAAGCGGAGAAGATGGGGGCGGGAGGAAGAAGAACCTGACCGACATGAT GCAGTCGCTCGAGGACAACCCGGATAACGATGAAGGATTTAACCTGGAGATAGGAGACAA GGGCCTGAGGAAGAACATGCCGAAAGGGAAGCAGATGCACAGCCGGAGCCAGATCTTCAA GTATGCGTATGGCCAGATCGAGAAGGAGAAGGCGATGCAGCAGGAGAACCACAACCTGAC CTTCTCAGGCGTGATCAGCATGGCCAAGGAGCACGACGTCAGCACGAGGCCCGTCATCGA GATCGCCTTCAAGGACCTTACGCTGACGCTGAAGGGGAGCAAGAAGAAGCTCTTGAGGTC CGTGACAGGGAAGCTCAGGCCTGGCCGTGTGGCCGCCGTGATGGGCCCATCTGGCGCGGG GAAGACCACGTTTCTCAGCGCCATTGCCGGGAAGGCGACTGGCTGCGAGACGTCAGGCAT GGTGCTCATCAATGGGAAGGTAGAACCCATCCGCGCGTATAAGAGGATCATTGGCTTTGT CCCCCAGGATGATATCGTTCATGGAAACCTCACCGTCCAAGAAAATCTCTGGTTCAATGC AAGATGCAGGCTTTCAGCAGACATGTCGAAAGCTGACAAGGTGCTGGTCGTGGAGAGGGT GATTGAGTCACTGGGACTGCAGGCTGTTCGAGATTCTCTGGTCGGGACAGTGGAACAGCG CGGCATCTCCGGTGGGCAGCGCAAGCGAGTCAATGTTGGCCTGGAAATGGTGATGGAGCC ATCGGTGCTGATTCTGGATGAGCCAACGTCCGGTCTGGACAGCGCCTCCTCCCTCCTCCT GCTCCGCGCCCTTCGCCGTGAAGCTCTCGAGGGCGTCAACATCTCCATGGTTGTTCATCA ACCCAGCTACACTCTGTACAGGATGTTCGACGACCTGATACTTCTAGCCAAGGGAGGGAT GACGGTGTACCATGGGCCTGTGAAGAAGGTGGAGGAGTACTTCACGGGGCTGGGCATCAC CGTGCCGGAGCGAGTGAATCCGCCGGACTACTACATCGACATCCTGGAGGGCATCGTCAA GCCCACCATGAGCGCCGGCGTCAGCGTCAAGGACCTGCCGCTCAGGTGGATGCTGCACAA TGGCTACGACGTCCCCCGGGACATGCTGCAGAGCTCCTCCGACTCTGAGTCCTCCTTCCG AGGGAGCACGAGCCCGGCCTCCGGCGATGCCTCCGTCGCGGCCGAGGTATGGGGCAACGT CAAGGACATCGTCGGCCAGAAGAAGGACGAGTATGACTACAACAAGAGCACTGAAGATTT GTCGAACCGCTGCACTCCTGGCATTCTTAGGCAGTACAGGTACTTCCTCGGAAGGTGTGG CAAGCAAAGGCTCCGTGAAGCGAGAATACAAGGGGTTGATTACCTCATACTCTGCCTTGC CGGGATATGCCTGGGGACACTGGCCAAAGTCAGTGACGAGACGTTTGGAGCGCTTGGATA CACATACACAGTCATTGCTGTTTCTCTGCTGTGCAAAATTGGAGCCTTGAGATCATTCGC GCTTGACAAGATATACTATTGGAGGGAGAGGGCCTCCGGGATGAGCTCTCTCGCCTACTT CATGTCCAAGGACACCATAGACCACCTCAACACCATCGTCAAGCCCATAGTCTACCTCTC TATGTTCTACTTCTTCAACAACCCCAGGTCATCCATCTGGGAGAACTACGTCATTCTTGT TGCCCTCGTCTACTGCGTCACTGGCATCGGCTACACTTTCGCCATCTTCTTTCAGCCAGG CTCTGCACAGTTGTGGTCTGCGCTGCTTCCGGTCGTTTTGACTCTGATAGCAACTCAGCG GAAGAACACTTTCTTTGCTGACCTGTGCTACACAAAGTGGGCTCTAGAAGGGTTTGTGAT GGCAAATGCTCAAAACTACTCCGGGGTGTGGCTGATTACACGGTGCGGTTCGCTGGTCAA GAGCGGCTATGACATCAACGACAAGGCTCTTTGCATAGTGGTTCTTATTGCCAATGGTAT AGTTTTCCGCTGCGTGGCATTCTTCTGCATGGTGACCTTCCAGAAGCACTAGAATCGTCC ATGACAAGAGAAAAACAACCCCATAATTCTCCTTCTTTGTCTATCCATGTAGCTGATACG TTCATTCATTGATTTATGTGCAATAGAAATGTACATTATAACCTCTTCTGTCGGGCGCCA GGTGTAGATGAGAGCAGACTCTTCAATAGTAGTAAAAAACTGATCAGGATTCATGAATAC CCTAAATCTCTATCTATTATAAAAATTGAAAATGTTTTTGCTGT