Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0414000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:12633341:12640831:-1 gene:Os11g0414000 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os11t0414000-01);Similar to predicted protein. (Os11t0414000-02)
Sequence	ATGAGCTCGAAGGAGAAGCCCACTCTTGGAGGCCAGCGGATTAAGACCCGCAAACGGAAT ATTGCTGCTCCTTTGGACCCTGCATCATTCTCTGATGCAATTGTCCAGATTTATCTGGAT AATGCTGGAGACCTGGAACTTGTTGCCAAAAGTATCGAGTCCTCGGATCTCAACTTCTCA CGTTACGGTGACACCTTTTTTGAGGTTGTATTCATTGGAGGGCGCACTCAGCCTGGCACA ATAAAACCTGAGGAAGAAGGAGAGCGTCACCCCTATTCTGTACTTGATTGTGCAGCGCAG CGTGAAGCAATTTTGCCTTCTGTTCTCTACATTCAGAAAACATTGCGCAGGAGGCCTTTC TTGATAAAGAATCTTGAAAATGTTATGCGCAAATTCCTTCAGTCACTGGAGTTCTTCGAA GAAAATGAGAGGAAGAAACTTGCCATTTTCACAGCACTTGCCTTTTCTCAGAAGTTATCA GGTCTTCCACCTGAAACTGTCTTCCAGCCACTGCTCAAGGATAATCTTGTTTCCAAAGGG ATAGTGCTTTCGTTCATTACTGAGTTTTTCAAAGAATATCTGAAGGAGAACACTTTAGAT GATCTTATTGCACTTTTGAAGAAAGGCAAAATGGAGGACAATTTGCTGGAATTTTTCCCA TCGGCAAAAAGAACCTCCGAGGCTTTATCTGAACATTTCACTAAAGAAGGTCTGACAAGT CTTGTTGAGTACAATGAAAAGAAGATGTTTGAGGTTAAACTTAAGGAGATAAAGTTAACA CTGACAACAATGATCAATGAAGAGGCTGAAATATCTGAAGTCACAGAAGCTGTCAAGCAA CAGGTGAAAGATGCTAAATTTCCTGATATAGAGGTTGTTCGCATGCTATGGGATGTGCTG ATGGAGGCTGTTCAGTGGTCTGGGAAGAACCAGCAACAAAATTCTAATTCAGCACTTCGG CAGGTGAAAGCATGGGCTGGCCTTTTGAATGCATTCTGCACAAGTGGCAGGCTTGAACTC GAACTCATATACAAAGTTCAGACACAGTGCTATGAGGATGCTAAGCTGATGAAGCTATTT CCTGAAATAATCAGAACGCTGTATGACCAAGATGTCCTAGCTGAAGATACCATCCTCCTT TGGTTCCGCAAGGGTTCAAACCCAAAGGGCAGGCAATCTTTCGTCAAAGCACTGGAACCT TTTGTTAAATGGCTGGAGGAGGCCGAGGAGGAGGAATAA

Peptide Sequence

PEP ID	Os11t0414000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:12633341:12640831:-1 gene:Os11g0414000 transcript:Os11t0414000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os11t0414000-01);Similar to predicted protein. (Os11t0414000-02)
Sequence	MSSKEKPTLGGQRIKTRKRNIAAPLDPASFSDAIVQIYLDNAGDLELVAKSIESSDLNFS RYGDTFFEVVFIGGRTQPGTIKPEEEGERHPYSVLDCAAQREAILPSVLYIQKTLRRRPF LIKNLENVMRKFLQSLEFFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVSKG IVLSFITEFFKEYLKENTLDDLIALLKKGKMEDNLLEFFPSAKRTSEALSEHFTKEGLTS LVEYNEKKMFEVKLKEIKLTLTTMINEEAEISEVTEAVKQQVKDAKFPDIEVVRMLWDVL MEAVQWSGKNQQQNSNSALRQVKAWAGLLNAFCTSGRLELELIYKVQTQCYEDAKLMKLF PEIIRTLYDQDVLAEDTILLWFRKGSNPKGRQSFVKALEPFVKWLEEAEEEE

Transcript Sequence

Transcript ID	Os11t0414000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:12633341:12640831:-1 gene:Os11g0414000 gene_biotype:protein_coding transcript_biotype:protein_coding description:eIF4-gamma/eIF5/eIF2-epsilon domain containing protein. (Os11t0414000-01);Similar to predicted protein. (Os11t0414000-02)
Sequence	GCACCAACCCCTACCCTGAGAAGAGCTAGGTTTTTTACCCTCCTCACTCTCCCTCGCGTC GGCGGCCGCGCGCAACTTTCCCTGAAGCCCCGGATCCACTCAACCCCCCTCCCCCTCCGC GCCAGATCGTTGTGTTTATGAGCTCGAAGGAGAAGCCCACTCTTGGAGGCCAGCGGATTA AGACCCGCAAACGGAATATTGCTGCTCCTTTGGACCCTGCATCATTCTCTGATGCAATTG TCCAGATTTATCTGGATAATGCTGGAGACCTGGAACTTGTTGCCAAAAGTATCGAGTCCT CGGATCTCAACTTCTCACGTTACGGTGACACCTTTTTTGAGGTTGTATTCATTGGAGGGC GCACTCAGCCTGGCACAATAAAACCTGAGGAAGAAGGAGAGCGTCACCCCTATTCTGTAC TTGATTGTGCAGCGCAGCGTGAAGCAATTTTGCCTTCTGTTCTCTACATTCAGAAAACAT TGCGCAGGAGGCCTTTCTTGATAAAGAATCTTGAAAATGTTATGCGCAAATTCCTTCAGT CACTGGAGTTCTTCGAAGAAAATGAGAGGAAGAAACTTGCCATTTTCACAGCACTTGCCT TTTCTCAGAAGTTATCAGGTCTTCCACCTGAAACTGTCTTCCAGCCACTGCTCAAGGATA ATCTTGTTTCCAAAGGGATAGTGCTTTCGTTCATTACTGAGTTTTTCAAAGAATATCTGA AGGAGAACACTTTAGATGATCTTATTGCACTTTTGAAGAAAGGCAAAATGGAGGACAATT TGCTGGAATTTTTCCCATCGGCAAAAAGAACCTCCGAGGCTTTATCTGAACATTTCACTA AAGAAGGTCTGACAAGTCTTGTTGAGTACAATGAAAAGAAGATGTTTGAGGTTAAACTTA AGGAGATAAAGTTAACACTGACAACAATGATCAATGAAGAGGCTGAAATATCTGAAGTCA CAGAAGCTGTCAAGCAACAGGTGAAAGATGCTAAATTTCCTGATATAGAGGTTGTTCGCA TGCTATGGGATGTGCTGATGGAGGCTGTTCAGTGGTCTGGGAAGAACCAGCAACAAAATT CTAATTCAGCACTTCGGCAGGTGAAAGCATGGGCTGGCCTTTTGAATGCATTCTGCACAA GTGGCAGGCTTGAACTCGAACTCATATACAAAGTTCAGACACAGTGCTATGAGGATGCTA AGCTGATGAAGCTATTTCCTGAAATAATCAGAACGCTGTATGACCAAGATGTCCTAGCTG AAGATACCATCCTCCTTTGGTTCCGCAAGGGTTCAAACCCAAAGGGCAGGCAATCTTTCG TCAAAGCACTGGAACCTTTTGTTAAATGGCTGGAGGAGGCCGAGGAGGAGGAATAAATGG TGCTACTGGAGGCTGTGCGAATGTATTGTTTGAATATTTCCTTATATCCCAAGTTTCCAG CTAAAGTTATGTATCTTTTGCTCCCTTGTTACTGGGCCGACCATTTTATGATCACATGCT GATCCTAATAGTCTACTGAATGTTAAAATCCCATGCAAGAAGTTATTCCAGGATTTGCTA AATTATTGGTTGTTACAACTTACAAGAATGTTCCATATGTTATTTCTC