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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0406945-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:12474878:12476342:-1 gene:Os11g0406945 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenazine biosynthesis-like protein, expressed. (Os11t0406945-00)
Sequence

ACGTTTTGTGTTGTGCAGAGTGAACTTTGCGGCCATGGAACATTAGCTGCTGCGCACTAC
CTGATTTCATCTGGCCTTGTGAAGTGTAATGCGATAGATTTCTTGGCAAAATCTGGATTT
CTAACAGCCAAGAAAGTTGTTGGCCTTAAGCAGTCCAGCACCTTGATTTCTCCACTGCAA
GAAGCTTGCACGAAATTCTTAATTGAACTGGATTTCCCCCTCATTCCAGTAGTCAAATGC
TCACCTTTGGAGATGCCATCTATTCCTGAGACTTTAAATGGTGCATCCGTCAGTAATGTG
CTGAAAACTGTTTCTGATTCTGCCACCGATCTCATTGTGGAGCTTAATTCAAGTGAGGAA
GTTGTTAATGTCCGACCAAACATTTCTGAATTAGTCCAATCTGCTGGAAGAGGGGTTGCT
GTTACAGGGCCAGCTCCTGTTGGATCTAGCTATGATTTTTTCAGTCGTTTCTTCTGCCCA
AAATATGGATTGAATGAGGATCCTGTATGTGGTAGTGTGCACTGTGCCTTGGCTCCTTAC
TGGGGCAAGAAGCTAGGTAAACAATGCATGACTGCCTCCATGGCTTCCCCAAGGAGTGGA
ACGCTTTATCTGCAATGGGATGAGGCGGCCCAGAGGGTTCAAATTCGCGGAGAAGCTGTT
ACTGTCATGGTTGGGAACATTCTAGTCTAG

Peptide Sequence

PEP ID

Os11t0406945-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:12474878:12476342:-1 gene:Os11g0406945 transcript:Os11t0406945-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenazine biosynthesis-like protein, expressed. (Os11t0406945-00)
Sequence

TFCVVQSELCGHGTLAAAHYLISSGLVKCNAIDFLAKSGFLTAKKVVGLKQSSTLISPLQ
EACTKFLIELDFPLIPVVKCSPLEMPSIPETLNGASVSNVLKTVSDSATDLIVELNSSEE
VVNVRPNISELVQSAGRGVAVTGPAPVGSSYDFFSRFFCPKYGLNEDPVCGSVHCALAPY
WGKKLGKQCMTASMASPRSGTLYLQWDEAAQRVQIRGEAVTVMVGNILV

Transcript Sequence

Transcript ID

Os11t0406945-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:12474878:12476342:-1 gene:Os11g0406945 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenazine biosynthesis-like protein, expressed. (Os11t0406945-00)
Sequence

ACGTTTTGTGTTGTGCAGAGTGAACTTTGCGGCCATGGAACATTAGCTGCTGCGCACTAC
CTGATTTCATCTGGCCTTGTGAAGTGTAATGCGATAGATTTCTTGGCAAAATCTGGATTT
CTAACAGCCAAGAAAGTTGTTGGCCTTAAGCAGTCCAGCACCTTGATTTCTCCACTGCAA
GAAGCTTGCACGAAATTCTTAATTGAACTGGATTTCCCCCTCATTCCAGTAGTCAAATGC
TCACCTTTGGAGATGCCATCTATTCCTGAGACTTTAAATGGTGCATCCGTCAGTAATGTG
CTGAAAACTGTTTCTGATTCTGCCACCGATCTCATTGTGGAGCTTAATTCAAGTGAGGAA
GTTGTTAATGTCCGACCAAACATTTCTGAATTAGTCCAATCTGCTGGAAGAGGGGTTGCT
GTTACAGGGCCAGCTCCTGTTGGATCTAGCTATGATTTTTTCAGTCGTTTCTTCTGCCCA
AAATATGGATTGAATGAGGATCCTGTATGTGGTAGTGTGCACTGTGCCTTGGCTCCTTAC
TGGGGCAAGAAGCTAGGTAAACAATGCATGACTGCCTCCATGGCTTCCCCAAGGAGTGGA
ACGCTTTATCTGCAATGGGATGAGGCGGCCCAGAGGGTTCAAATTCGCGGAGAAGCTGTT
ACTGTCATGGTTGGGAACATTCTAGTCTAGAAAATACTTCTGATTATTGAACAAC