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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0351555-03
CDS Infomation

cds chromosome:IRGSP-1.0:11:12375780:12377240:-1 gene:Os11g0351555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-01);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-02);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-03)
Sequence

ATGAGCTGGTGGTGGGCGGGCGCCATAGGCGCAGTGAAGAAGCGGCAGGAAGAGAACGCG
GCGGCCACCGAGCCGTCCTTCCAGAGCGTCGCCCTCGTCGTCGGCTCCACGGGCATCGTC
GGCACCTCCCTCCTCGACATCCTCCCGCTCCAGGACACCCCGGGCGGGCCCTGGAAGGTC
TACGCCGTCTCCCGCCGCCCGCTCCCTCCCTGGTCCCCGCCGGCCTCCCCCGCCGTCACC
CACCTCCACCTCGACCTCGCCGACTCCGCCGCCGTTGCCGAGGTCCTCACGCCCCTCACC
GACATCACCCACGTCTTCTACGTCGCCTGGTCCGCCCACCCCACGGAGGCCCAGAACCGC
GAGGTGAACTCCGCCATGCTCCGCAACATCCTCTCCGTCGTCGTCCCCAACTGCCCCGCT
CTCGTCCACGTCTGCCTCCAGACCGGCCGCAAGCACTACATCGGACCATTCGAGGTCATC
GGCAAGATCGCCGCCCCGGACCCGCCCTTCACCGAGGACATGCTCCGCCTCGATTGCCCC
AACTTCTACTACGACCTGGAGGACGTCCTCTTCAACGAGGTCTCCCGCCGCGACGGCGCC
GTCAGCTGGTCCGTGCACCGCCCCACCGTCGTCTTCGGATTCTCTCCCCGAAGCGCCATG
AATGTCGTCGGCAGCCTGTGCGTTTATGCCGCCATCTGCCGCAAGGAGGGCGCTGTGCTG
CGATGGCCTGGATCCAGGGTCGCCTGGGAGGGATTCAGTGACGCGTCCGATGCGGATCTC
ATCGCTGAACACGAGATCTGGGCCGCCGTTGAGCCATTCGCCAAGAATGAGGCATTTAAT
TGCAGCAACGGGGATCTCTACAAGTGGAAACTTCTCTGGCCGATGCTGGCAGACCAATTC
GGCGTCGAATGGTCTGGCTACGAGGGAGAAGAGAGCAGCTTCAAGCTTGCAGATGCCATG
TCGGGGAAGGAGGCAGTGTGGGCAGAGATTGTCAAAGAGAATGATCTCATGGACACCGAG
CTTGAAGAGATCACCAATTGGTGGTTTGTTGATGCCGTGTTCGGCGTCCGCAGCGAGCAT
TTGGATAGCATGAACAAGAGCAAGGAACATGGATTCCTTGGCTTCCGGAACACGGTGAAT
TCCTTCAACACATGGATAGAAAAGATGAAGGTTTTCAAGATTGTCCCATGA

Peptide Sequence

PEP ID

Os11t0351555-03
PEP Infomation

pep chromosome:IRGSP-1.0:11:12375780:12377240:-1 gene:Os11g0351555 transcript:Os11t0351555-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-01);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-02);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-03)
Sequence

MSWWWAGAIGAVKKRQEENAAATEPSFQSVALVVGSTGIVGTSLLDILPLQDTPGGPWKV
YAVSRRPLPPWSPPASPAVTHLHLDLADSAAVAEVLTPLTDITHVFYVAWSAHPTEAQNR
EVNSAMLRNILSVVVPNCPALVHVCLQTGRKHYIGPFEVIGKIAAPDPPFTEDMLRLDCP
NFYYDLEDVLFNEVSRRDGAVSWSVHRPTVVFGFSPRSAMNVVGSLCVYAAICRKEGAVL
RWPGSRVAWEGFSDASDADLIAEHEIWAAVEPFAKNEAFNCSNGDLYKWKLLWPMLADQF
GVEWSGYEGEESSFKLADAMSGKEAVWAEIVKENDLMDTELEEITNWWFVDAVFGVRSEH
LDSMNKSKEHGFLGFRNTVNSFNTWIEKMKVFKIVP

Transcript Sequence

Transcript ID

Os11t0351555-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:12375780:12377240:-1 gene:Os11g0351555 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-01);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-02);Similar to A.thaliana gene induced upon wounding stress. (Os11t0351555-03)
Sequence

ATCCCCCGTTCGTCCGTCCGCTCTCCTCCTTCCCAACCGGCAATCCGCCGATCCGTCCGA
CCTCTAGCTTGTACGCTGCCGCTGCCGCCATGAGCTGGTGGTGGGCGGGCGCCATAGGCG
CAGTGAAGAAGCGGCAGGAAGAGAACGCGGCGGCCACCGAGCCGTCCTTCCAGAGCGTCG
CCCTCGTCGTCGGCTCCACGGGCATCGTCGGCACCTCCCTCCTCGACATCCTCCCGCTCC
AGGACACCCCGGGCGGGCCCTGGAAGGTCTACGCCGTCTCCCGCCGCCCGCTCCCTCCCT
GGTCCCCGCCGGCCTCCCCCGCCGTCACCCACCTCCACCTCGACCTCGCCGACTCCGCCG
CCGTTGCCGAGGTCCTCACGCCCCTCACCGACATCACCCACGTCTTCTACGTCGCCTGGT
CCGCCCACCCCACGGAGGCCCAGAACCGCGAGGTGAACTCCGCCATGCTCCGCAACATCC
TCTCCGTCGTCGTCCCCAACTGCCCCGCTCTCGTCCACGTCTGCCTCCAGACCGGCCGCA
AGCACTACATCGGACCATTCGAGGTCATCGGCAAGATCGCCGCCCCGGACCCGCCCTTCA
CCGAGGACATGCTCCGCCTCGATTGCCCCAACTTCTACTACGACCTGGAGGACGTCCTCT
TCAACGAGGTCTCCCGCCGCGACGGCGCCGTCAGCTGGTCCGTGCACCGCCCCACCGTCG
TCTTCGGATTCTCTCCCCGAAGCGCCATGAATGTCGTCGGCAGCCTGTGCGTTTATGCCG
CCATCTGCCGCAAGGAGGGCGCTGTGCTGCGATGGCCTGGATCCAGGGTCGCCTGGGAGG
GATTCAGTGACGCGTCCGATGCGGATCTCATCGCTGAACACGAGATCTGGGCCGCCGTTG
AGCCATTCGCCAAGAATGAGGCATTTAATTGCAGCAACGGGGATCTCTACAAGTGGAAAC
TTCTCTGGCCGATGCTGGCAGACCAATTCGGCGTCGAATGGTCTGGCTACGAGGGAGAAG
AGAGCAGCTTCAAGCTTGCAGATGCCATGTCGGGGAAGGAGGCAGTGTGGGCAGAGATTG
TCAAAGAGAATGATCTCATGGACACCGAGCTTGAAGAGATCACCAATTGGTGGTTTGTTG
ATGCCGTGTTCGGCGTCCGCAGCGAGCATTTGGATAGCATGAACAAGAGCAAGGAACATG
GATTCCTTGGCTTCCGGAACACGGTGAATTCCTTCAACACATGGATAGAAAAGATGAAGG
TTTTCAAGATTGTCCCATGATGCGTTCAATTGTTTTTTATATTATTGCACATCTTGTTTT
CTATGCCATTCATCCAAATTGCTCCCGAATTTAGTTCCATTATAAACATTGCTTTCAAGG
TTACATGTTGTAAAATGCTGTATTCTACAAAAAACTAGAACCGAATAAAATTAATCAAGT
GGAGAATGAATTTTATGGATC