Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0304050-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:11454885:11456583:-1 gene:Os11g0304050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0304050-00)
Sequence	ATGGCAGGTCAGCCTCCCAACATGTTGGCACCACCGACCGACGACGAGCTGCTGCACGCG CAGGCCGACATGTTGCGCCACAGCCTCTACTTCGTCACGTCCATGGCGTTTCAGTGCGCC GTCAAGCTCGGCATCCCCACCGCCATCCACCGCGCCGGCGGCACCGCCTCGCTGCCCGAC CTTGTCGCCGCCCTCTCCCTCCCGCCCGCCAAGCTCCCGTTCCTCCGCCGCCTCATGCGG CTGCTGGTCAACTCGGGCGTCTTCGCCGCTGCCGACGACACCGCCACCGGGTGGGCCGGG ATGTACCGCCTCACCCCGCTGTCGTGGCTCCTGGTGGAAGGCGAAGGCGCAGCGCCCGTC GTCGACGGCCACCCGAGCCAGGTGCTTGTGGTGCTCGCCGCGACGTCCAGGCACTTCGTG GAGGCGGCGATGGGGCTCGCGGACTGGTTCGGGAAGGACCTGCCGCCGTCGTCCTCGGCG CCGCCGTCGCCGTTCGAGGAGGTGCACGGCGCCGCGCTGTTCGACGAGAGCATGGCGAAC CTTGACCCGGAGTCTGACTCGATGTTCAACGAAGCTCTAGCGGCGCACGACCACTCAGAC TTCCCCACGGTTCTCCGGGAGTGCCGTGAGGTGTTCCAGGGGGTGGAGTCGCTCACCGAT TGCCGCGGTGGTGACGGCAGGGCGGCGAAGGCCATCGTCGAGGCCTTCCCACACATCAAG TTCACCGTGCTGGACTTTCCCCGGGTGATTGGCGAGACACGAACTGGTGTGGTGAACTAC GTAGCGGGCGACATGTTCCGTGAGATCCCACCTGCTCAAGCTGTGATGCTCCAGCTTGTG CTTCACCACTGGAATGACGAGGATTGTGTGAAGATCCTAGCTAATTGCAAGAAAGCTATT CCAACCCGAGAAGATGGAGGGAAGGTGATCATCATAGATATAGTTATTGGTGCTCCTTCA GGACTGCTGCTAGAAGCCCAGCTCCTCATGGATGTGGCTATGATGGTGGTGACCAAAGGC CGACAGCGAGACGAGAATGATTGGCGTGATCTCTTCAGCAAAGCAGGCTTCAGTGACTAC AATATTGTGAAGAAACTGGGAGCTCGAGGCGTCTTTGAGGTCTACCCATAG

Peptide Sequence

PEP ID	Os11t0304050-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:11454885:11456583:-1 gene:Os11g0304050 transcript:Os11t0304050-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0304050-00)
Sequence	MAGQPPNMLAPPTDDELLHAQADMLRHSLYFVTSMAFQCAVKLGIPTAIHRAGGTASLPD LVAALSLPPAKLPFLRRLMRLLVNSGVFAAADDTATGWAGMYRLTPLSWLLVEGEGAAPV VDGHPSQVLVVLAATSRHFVEAAMGLADWFGKDLPPSSSAPPSPFEEVHGAALFDESMAN LDPESDSMFNEALAAHDHSDFPTVLRECREVFQGVESLTDCRGGDGRAAKAIVEAFPHIK FTVLDFPRVIGETRTGVVNYVAGDMFREIPPAQAVMLQLVLHHWNDEDCVKILANCKKAI PTREDGGKVIIIDIVIGAPSGLLLEAQLLMDVAMMVVTKGRQRDENDWRDLFSKAGFSDY NIVKKLGARGVFEVYP

Transcript Sequence

Transcript ID	Os11t0304050-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:11454885:11456583:-1 gene:Os11g0304050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0304050-00)
Sequence	AGCTAGATTTCAATTTTTAATGGCAGGTCAGCCTCCCAACATGTTGGCACCACCGACCGA CGACGAGCTGCTGCACGCGCAGGCCGACATGTTGCGCCACAGCCTCTACTTCGTCACGTC CATGGCGTTTCAGTGCGCCGTCAAGCTCGGCATCCCCACCGCCATCCACCGCGCCGGCGG CACCGCCTCGCTGCCCGACCTTGTCGCCGCCCTCTCCCTCCCGCCCGCCAAGCTCCCGTT CCTCCGCCGCCTCATGCGGCTGCTGGTCAACTCGGGCGTCTTCGCCGCTGCCGACGACAC CGCCACCGGGTGGGCCGGGATGTACCGCCTCACCCCGCTGTCGTGGCTCCTGGTGGAAGG CGAAGGCGCAGCGCCCGTCGTCGACGGCCACCCGAGCCAGGTGCTTGTGGTGCTCGCCGC GACGTCCAGGCACTTCGTGGAGGCGGCGATGGGGCTCGCGGACTGGTTCGGGAAGGACCT GCCGCCGTCGTCCTCGGCGCCGCCGTCGCCGTTCGAGGAGGTGCACGGCGCCGCGCTGTT CGACGAGAGCATGGCGAACCTTGACCCGGAGTCTGACTCGATGTTCAACGAAGCTCTAGC GGCGCACGACCACTCAGACTTCCCCACGGTTCTCCGGGAGTGCCGTGAGGTGTTCCAGGG GGTGGAGTCGCTCACCGATTGCCGCGGTGGTGACGGCAGGGCGGCGAAGGCCATCGTCGA GGCCTTCCCACACATCAAGTTCACCGTGCTGGACTTTCCCCGGGTGATTGGCGAGACACG AACTGGTGTGGTGAACTACGTAGCGGGCGACATGTTCCGTGAGATCCCACCTGCTCAAGC TGTGATGCTCCAGCTTGTGCTTCACCACTGGAATGACGAGGATTGTGTGAAGATCCTAGC TAATTGCAAGAAAGCTATTCCAACCCGAGAAGATGGAGGGAAGGTGATCATCATAGATAT AGTTATTGGTGCTCCTTCAGGACTGCTGCTAGAAGCCCAGCTCCTCATGGATGTGGCTAT GATGGTGGTGACCAAAGGCCGACAGCGAGACGAGAATGATTGGCGTGATCTCTTCAGCAA AGCAGGCTTCAGTGACTACAATATTGTGAAGAAACTGGGAGCTCGAGGCGTCTTTGAGGT CTACCCATAGCAGTGGTTCCAACACTAATTGTGTGGGTCCCCTCTGTGGAGGATGTGATC TAAGTGAATAAAGGAAGGAAGGGCATATTTTCTGAAACAAATTGTTATATATGTGATCTA TGTCAAGCTTGGTTTTGTGAATTAATACGTGTAAAACTTCTGTTGAATGTTTCATGTGAG TTAATGTGTCCGGCTTGCTTATGTAAAATTTCAATATGTAAAATCA