Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0297800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:10972674:10978662:1 gene:Os11g0297800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0297800-01)
Sequence	ATGGCGGCGGCGGCCTTCTCATGCTGCCATGGCGCCGGCGGCATGGTGGTGATCGTGGTG GTGGTGATGGCGATGTTGGGAGGGGTGGTCGCCGGCGGGGAGCCGCCGTTCTCGTGCGGC GGGGCGGCGGCGGGCGGCGGGCAGGGGTACGCGTTCTGCGACGCGACGCTGCCGGCGGAG CAGCGGGCGGCGGACCTGGTGGCGAGGCTGACGGCGGCGGAGAAGGTGGCGCAGCTCGGG GACCAGGCGGCGGGCGTGCCGCGGCTGGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCG CTCCACGGGCTGGCCACCTCCGGCAGAGGGCTCCACTTCGACGCCCCCGGCTCCGCCGCG CGCGCCGCCACCAGCTTCCCCCAGGTCCTCCTCACCGCCGCCGCCTTCGACGACGACCTC TGGTTCCGCATCGGCCAGGCCATCGGCACGGAGGCGAGGGCGCTGTACAACATTGGCCAG GCAGAGGGGCTGACCATGTGGTCCCCCAACGTGAACATCTTCAGGGACCCGCGGTGGGGC CGTGGCCAGGAGACCCCCGGCGAGGACCCCACCATGGCGAGCAAGTACGCCGTCGCCTTT GTCAAGGGGATGCAGGGGAACTCGTCGGCGATCCTCCAGACCTCCGCGTGCTGTAAGCAC GTCACCGCGTATGACCTCGAGGATTGGAACGGTGTCCAACGCTACAATTTCAACGCAAAA GTGACGGCGCAGGATCTAGAGGACACATACAACCCGCCGTTCAGGAGCTGCGTGGTGGAC GCCAAGGCTACGTGCATAATGTGCGCCTACACTGGCATCAATGGCGTCCCGGCCTGCGCG AACGCCGACCTCCTGACCAAGACCGTCAGGGGAGACTGGGGCCTGGACGGGTACATCGCC TCGGACTGCGACGCGGTCGCCATCATGCGTGATGCGCAGCGCTACACACAGACGCCGGAG GACGCCGTCGCCGTCGCCCTCAAGGCCGGATTGGACATGAACTGTGGCACCTACATGCAG CAGCACGCCACGGCGGCGATCCAGCAGGGGAAGCTGACGGAGGAGGACATCGACAAGGCG CTCAAGAACCTCTTCGCCATCCGGATGCGGCTCGGGCACTTCGACGGCGATCCCAGGAGC AACAGCGTGTACGGCGGGCTCGGGGCTGCCGACATCTGCACACCGGAGCACAGGAGCCTC GCGCTCGAGGCGGCGATGGACGGCATTGTCTTGCTCAAGAACGACGCCGGCATCCTCCCG CTCGACCGGACGGCGGTGGCCTCCGCGGCAGTCATTGGCCCCAATGCCAATGATGGCCTG GCCCTCATCGGCAACTATTTCGGCCCGCCGTGTGAATCGACGACGCCGCTCAACGGCATA CTGGGGTACATCAAGAACGTGAGGTTCCTCGCTGGTTGCAATTCGGCGGCCTGCGACGTA GCCGCCACGGACCAAGCTGCTGCGGTAGCGAGCTCTTCGGATTATGTCTTCCTGTTCATG GGGCTCAGCCAGAAGCAGGAGAGCGAAGGGCGCGACAGGACAAGCCTGTTGCTCCCCGGG GAGCAGCAAAGCCTCATCACCGCCGTAGCCGACGCGGCGAAGCGCCCTGTGATCCTGGTG CTCCTCACCGGTGGCCCGGTGGACGTCACGTTCGCGCAGACGAACCCAAAGATCGGCGCC ATCCTGTGGGCTGGTTACCCAGGGCAAGCTGGTGGTCTCGCCATCGCCAGGGTGCTCTTC GGTGACCACAACCCCGGTGGGAGGCTGCCAGTGACATGGTACCCAGAAGAGTTCACCAAG GTGCCCATGACGGACATGCGGATGCGTGCCGACCCAGCCACCGGCTACCCTGGCCGGAGC TATCGCTTCTACCAGGGCAAGACCGTCTACAAGTTCGGCTACGGTCTCAGCTACTCCAGC TACTCACGTCAGCTGGTCTCTGGTGGTAAGCCAGCAGAGTCCTACACCAACCTACTTGCT AGTCTGAGGACAACAACAACATCAGAAGGTGATGAGAGCTACCACATTGAAGAGATCGGC ACTGACGGCTGTGAGCAGCTCAAGTTCCCGGCGGTTGTGGAGGTGCAGAACCATGGCCCC ATGGATGGCAAGCACTCTGTGCTCATGTACCTCCGGTGGCCGAATGCTAAGGGCGGCCGC CCGACAACCCAGCTGATCGGTTTCAGGAGCCAGCATCTCAAGGTAGGGGAGAAGGCCAAC ATCAGGTTTGACATCAGCCCATGTGAGCACTTCAGCAGGGTAAGGAAAGACGGCAAGAAG GTGATCGACAGAGGGTCTCACTACCTCATGGTTGACAAGGATGAGTTAGAGATTAGATTC GAGGCCTGA

Peptide Sequence

PEP ID	Os11t0297800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:10972674:10978662:1 gene:Os11g0297800 transcript:Os11t0297800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0297800-01)
Sequence	MAAAAFSCCHGAGGMVVIVVVVMAMLGGVVAGGEPPFSCGGAAAGGGQGYAFCDATLPAE QRAADLVARLTAAEKVAQLGDQAAGVPRLGVPAYKWWSEALHGLATSGRGLHFDAPGSAA RAATSFPQVLLTAAAFDDDLWFRIGQAIGTEARALYNIGQAEGLTMWSPNVNIFRDPRWG RGQETPGEDPTMASKYAVAFVKGMQGNSSAILQTSACCKHVTAYDLEDWNGVQRYNFNAK VTAQDLEDTYNPPFRSCVVDAKATCIMCAYTGINGVPACANADLLTKTVRGDWGLDGYIA SDCDAVAIMRDAQRYTQTPEDAVAVALKAGLDMNCGTYMQQHATAAIQQGKLTEEDIDKA LKNLFAIRMRLGHFDGDPRSNSVYGGLGAADICTPEHRSLALEAAMDGIVLLKNDAGILP LDRTAVASAAVIGPNANDGLALIGNYFGPPCESTTPLNGILGYIKNVRFLAGCNSAACDV AATDQAAAVASSSDYVFLFMGLSQKQESEGRDRTSLLLPGEQQSLITAVADAAKRPVILV LLTGGPVDVTFAQTNPKIGAILWAGYPGQAGGLAIARVLFGDHNPGGRLPVTWYPEEFTK VPMTDMRMRADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLA SLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPNAKGGR PTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEIRF EA

Transcript Sequence

Transcript ID	Os11t0297800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:10972674:10978662:1 gene:Os11g0297800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0297800-01)
Sequence	CTGAACACCCTCGCCGCCGCGACACACATCGCCGTCGTCGGAGGAGGAGACACCATGGCG GCGGCGGCCTTCTCATGCTGCCATGGCGCCGGCGGCATGGTGGTGATCGTGGTGGTGGTG ATGGCGATGTTGGGAGGGGTGGTCGCCGGCGGGGAGCCGCCGTTCTCGTGCGGCGGGGCG GCGGCGGGCGGCGGGCAGGGGTACGCGTTCTGCGACGCGACGCTGCCGGCGGAGCAGCGG GCGGCGGACCTGGTGGCGAGGCTGACGGCGGCGGAGAAGGTGGCGCAGCTCGGGGACCAG GCGGCGGGCGTGCCGCGGCTGGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCAC GGGCTGGCCACCTCCGGCAGAGGGCTCCACTTCGACGCCCCCGGCTCCGCCGCGCGCGCC GCCACCAGCTTCCCCCAGGTCCTCCTCACCGCCGCCGCCTTCGACGACGACCTCTGGTTC CGCATCGGCCAGGCCATCGGCACGGAGGCGAGGGCGCTGTACAACATTGGCCAGGCAGAG GGGCTGACCATGTGGTCCCCCAACGTGAACATCTTCAGGGACCCGCGGTGGGGCCGTGGC CAGGAGACCCCCGGCGAGGACCCCACCATGGCGAGCAAGTACGCCGTCGCCTTTGTCAAG GGGATGCAGGGGAACTCGTCGGCGATCCTCCAGACCTCCGCGTGCTGTAAGCACGTCACC GCGTATGACCTCGAGGATTGGAACGGTGTCCAACGCTACAATTTCAACGCAAAAGTGACG GCGCAGGATCTAGAGGACACATACAACCCGCCGTTCAGGAGCTGCGTGGTGGACGCCAAG GCTACGTGCATAATGTGCGCCTACACTGGCATCAATGGCGTCCCGGCCTGCGCGAACGCC GACCTCCTGACCAAGACCGTCAGGGGAGACTGGGGCCTGGACGGGTACATCGCCTCGGAC TGCGACGCGGTCGCCATCATGCGTGATGCGCAGCGCTACACACAGACGCCGGAGGACGCC GTCGCCGTCGCCCTCAAGGCCGGATTGGACATGAACTGTGGCACCTACATGCAGCAGCAC GCCACGGCGGCGATCCAGCAGGGGAAGCTGACGGAGGAGGACATCGACAAGGCGCTCAAG AACCTCTTCGCCATCCGGATGCGGCTCGGGCACTTCGACGGCGATCCCAGGAGCAACAGC GTGTACGGCGGGCTCGGGGCTGCCGACATCTGCACACCGGAGCACAGGAGCCTCGCGCTC GAGGCGGCGATGGACGGCATTGTCTTGCTCAAGAACGACGCCGGCATCCTCCCGCTCGAC CGGACGGCGGTGGCCTCCGCGGCAGTCATTGGCCCCAATGCCAATGATGGCCTGGCCCTC ATCGGCAACTATTTCGGCCCGCCGTGTGAATCGACGACGCCGCTCAACGGCATACTGGGG TACATCAAGAACGTGAGGTTCCTCGCTGGTTGCAATTCGGCGGCCTGCGACGTAGCCGCC ACGGACCAAGCTGCTGCGGTAGCGAGCTCTTCGGATTATGTCTTCCTGTTCATGGGGCTC AGCCAGAAGCAGGAGAGCGAAGGGCGCGACAGGACAAGCCTGTTGCTCCCCGGGGAGCAG CAAAGCCTCATCACCGCCGTAGCCGACGCGGCGAAGCGCCCTGTGATCCTGGTGCTCCTC ACCGGTGGCCCGGTGGACGTCACGTTCGCGCAGACGAACCCAAAGATCGGCGCCATCCTG TGGGCTGGTTACCCAGGGCAAGCTGGTGGTCTCGCCATCGCCAGGGTGCTCTTCGGTGAC CACAACCCCGGTGGGAGGCTGCCAGTGACATGGTACCCAGAAGAGTTCACCAAGGTGCCC ATGACGGACATGCGGATGCGTGCCGACCCAGCCACCGGCTACCCTGGCCGGAGCTATCGC TTCTACCAGGGCAAGACCGTCTACAAGTTCGGCTACGGTCTCAGCTACTCCAGCTACTCA CGTCAGCTGGTCTCTGGTGGTAAGCCAGCAGAGTCCTACACCAACCTACTTGCTAGTCTG AGGACAACAACAACATCAGAAGGTGATGAGAGCTACCACATTGAAGAGATCGGCACTGAC GGCTGTGAGCAGCTCAAGTTCCCGGCGGTTGTGGAGGTGCAGAACCATGGCCCCATGGAT GGCAAGCACTCTGTGCTCATGTACCTCCGGTGGCCGAATGCTAAGGGCGGCCGCCCGACA ACCCAGCTGATCGGTTTCAGGAGCCAGCATCTCAAGGTAGGGGAGAAGGCCAACATCAGG TTTGACATCAGCCCATGTGAGCACTTCAGCAGGGTAAGGAAAGACGGCAAGAAGGTGATC GACAGAGGGTCTCACTACCTCATGGTTGACAAGGATGAGTTAGAGATTAGATTCGAGGCC TGAGTTTTAGATGGAGGGAAGGAATTACAGGTGGTGCATACGGTGCAATTCTTTCACTGT ATAATTTATTTGTTGCAGTGGTTATGATTCAGTTGCCTCGGAAACTGAGGTTTCTAGGCT CCAGGAGATGTGTTTAGCACCTTTTCAGGTATAGCTCACACATTATTCCAGACCAGAAAT GTCTCCCAGACTCCCGGTATCTTTGAAATGGATAGTCTGGGGAACATGTAAAATGGATTA TTGATTTACCACCTCACAATTAACGAGCAATAATATTTTATACCCTTCTCTGTATTTAGA GTGCAATGCAAACT