Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0294600-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:10786668:10791694:-1 gene:Os11g0294600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-02)
Sequence

ATGGGGGGCTGCTGTTGCTGTTCATCAAGAGGATCTGAGACAGATAGAGCACCAGTTCAT
ATCTATCGTCAGCAAAATCAAGAGGAGCATGAACCATTGTCTTCAGCCTATGATGGATCA
TCTCCAGCTTCTGCTATAGTTGCTGTTGACACAAATCTGGATACATCCACTCCTGATACT
TACCGAGCACCACCTGCACCATTGCCTTATGATGTTAGTTTGCCAGTCCCAGAAAACCCT
GATTTGGAGAAGTCAGACCTGAAGAGCAAAACCGATGACCAACAGGAGGAATCTTTAGAG
GTGGATGAGTTCAAATCATGTGAAAAATGTGTCGCTGAAGATAAGCCTGATGAGGAGGAT
GTTTGCCCAATCTGTCTTGAAGAATATGATGCAGAAAATCCTCGCTCTTTAACTAAATGT
GAGCATCATTTCCATCTTTGTTGCATACTTGAATGGATGGAGCGAAGTGATACCTGCCCA
GTTTGTGACCAGATTACTTTGATAGATGATATGTATGAATAG

Peptide Sequence

PEP ID

Os11t0294600-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:10786668:10791694:-1 gene:Os11g0294600 transcript:Os11t0294600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-02)
Sequence

MGGCCCCSSRGSETDRAPVHIYRQQNQEEHEPLSSAYDGSSPASAIVAVDTNLDTSTPDT
YRAPPAPLPYDVSLPVPENPDLEKSDLKSKTDDQQEESLEVDEFKSCEKCVAEDKPDEED
VCPICLEEYDAENPRSLTKCEHHFHLCCILEWMERSDTCPVCDQITLIDDMYE

Transcript Sequence

Transcript ID

Os11t0294600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:10786668:10791694:-1 gene:Os11g0294600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0294600-02)
Sequence

GTCTCCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCT
CCCCGTCGCGGCGGCGGCGGCGGCGACCGGCGAGGGCGACGCCACCGATCGGGGGCCTCT
CACCCGCTCCCCTCCCTCACTCACCGGGGCCTCGGTTTCGCCAGCTCGGAGGGAGTTCTT
TCTCTCTCTCCGTAGACGTCTCCGTGGGTTCTTGCTTGTCTCTGATTCTTCTTGTGGATT
GGCGGTGGAGGAGCGGGGATCGATCGATCTACCCCTGGACTCGGATTGACTCTCCTCTCT
CGCTGGGCTATGAGAGACGGAATTTTAGTTTTAAACGGCAGCTATTTCATAGCCTGGAGT
AAGCTTTTTCATTCAGGATAGCATGGGGGGCTGCTGTTGCTGTTCATCAAGAGGATCTGA
GACAGATAGAGCACCAGTTCATATCTATCGTCAGCAAAATCAAGAGGAGCATGAACCATT
GTCTTCAGCCTATGATGGATCATCTCCAGCTTCTGCTATAGTTGCTGTTGACACAAATCT
GGATACATCCACTCCTGATACTTACCGAGCACCACCTGCACCATTGCCTTATGATGTTAG
TTTGCCAGTCCCAGAAAACCCTGATTTGGAGAAGTCAGACCTGAAGAGCAAAACCGATGA
CCAACAGGAGGAATCTTTAGAGGTGGATGAGTTCAAATCATGTGAAAAATGTGTCGCTGA
AGATAAGCCTGATGAGGAGGATGTTTGCCCAATCTGTCTTGAAGAATATGATGCAGAAAA
TCCTCGCTCTTTAACTAAATGTGAGCATCATTTCCATCTTTGTTGCATACTTGAATGGAT
GGAGCGAAGTGATACCTGCCCAGTTTGTGACCAGATTACTTTGATAGATGATATGTATGA
ATAGCATTGGAGCATGGGACTATTATGTTTGGTTTGATGCTAGTTTGTTTTAATGAGGAA
GTACAGTCAGCAAAGCTCCTGATCTATCAACCTGGTCAGACGGGGGTGCTATTGGAATGA
ATTTTGAGAAAACTAAGGGAAAATAATTGAAGACGGGAATGGCTTGAAATTTGTTAAATA
TCATCTCAGCTTTTTACATTTTGTTTGAAGCATTAACTGTTCATGACAACAGGAGGATTT
GTTAGTATCCATATCTACTGCTGGTTCGATTGCTTCACAGTTGATGAAACCCCCAGATGA
GCTATCTGTTTCTTTGTAGTTTTGAACTTGGGATGTCTTCCATTTCATTTCTGGTTGCGG
TTAGCGTCTGTATAAATCATGACACGTTAGATAGGTGACAGGGAAAAAAAACTTTATTCT
AATTTATGTTCAACGATCAAAGCTGTACAAGCTTCATGTATATCCTTCGCCTTTTGATTA
GTCAGGGACTATTAAGTCCCCTGTTGTGAAACAAGTTGGCTGATTTATGTAAAATGGTAT
ACATTTGCCTGCTTTATAATCTCGGCATCTTTTTTGGGTTCAGCT