Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0291000-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:10575509:10582899:-1 gene:Os11g0291000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0291000-00)
Sequence	ATGGCCGACGAGCCGCCGTACTCGTGCGGGCCGCCGCCGCCGCCGTCGTCGTCGCTGGCG GCGCAGGGCCAGCAGCAGCAGCCGCACCGGTTCTGCGACGCGTGGCTGACGGCGGAGCAG CGGGCGGCGGACCTGGTGGCGAACCTGACGCTGGCCGAGAAGGTGTCCCAGCTCGGCGAC CGCGCGGCGGGCGTGGCGCGGCTGGGCGTGCCGGCGTACGAGTGGTGGTCGGAGGGGCTC CACGGCCTCTCCATCTGGGGCCGCGGCATCCGCTTCAACGGCACCGTCCGCGCCGTCACC AGCTTCCCGCAGGTGATCCTCACGGCGGCGGCGTTCGACGCCGGGCTGTGGCGGCGCGTC GGCGAGGCCGTGGGCGCGGAGGCGCGGGCGCTGTACAACCTCGGGCAGGCCAACGGGCTG ACCATCTGGTCCCCCAACGTGAACATCTTCAGGGACCCGAGGTGGGGACGCGGCCAGGAG ACGCCCGGCGAGGACCCCGTCACGGCGAGCAGGTACGCCGTGGCGTTCGTGACGGGGCTG CAGGGGATCGGCGGGGAGGCGTCCGCGTGCTGCAAGCACGCCACGGCGTACGACCTCGAC TACTGGAACAATGTCGTGCGGTACAACTACGATTCAAAGGTGACTCTCCAGGATCTTGAG GACACCTACAACCCGCCGTTCAAGAGCTGCGTAGCGGAAGGGAAGGCGACCTGCATCATG TGTGGTTACAACAGCATCAATGGCGTCCCTGCCTGTGCCAGCTCCGATCTCCTCACCAAG AAAGTAAGACAGGAATGGGGAATGAACGGGTATGTTGCTTCGGACTGTGATGCGGTGGCT ACTATACGCGACGCGCATCACTACACGTTATCGCCAGAGGATACAGTTGCTGCAATGAAT TTAACTGAAATCGTGTTGCAATTATCAGGAATGGACGTGAACTGCGGGAACTACACACAG GTGCACGCCATGGCCGCAGTCCAGAAGGGGAACCTGACGGAGAAGGACATCGACAGGGCC CTCGTCAACCTCTTCGCCGTCCGCATGCGCCTCGGCCACTTCGACGGCGACCCCAGGAGC AACGCCGTGTACGGCCACCTCGGCGCCGCGGACGTGTGCTCGCCAGCGCACAAGAGCCTC GCCCTCGAGGCAGCGCAGGACGGCATCGTCCTCCTCAAGAACGACGCCGGCGCCCTCCCG CTCCAGCCCTCGGCGGTCACCTCCCTCGCCGTGATCGGCCCCAACGCCGACAACCTCGGC GCTCTCCACGGCAACTACTTCGGCCCGCCGTGCGAGACCACCACGCCGCTGCAAGGGATC AAGGGGTACCTCGGCGACCGCGCGAGGTTCCTCGCCGGGTGCGACTCGCCGGCGTGCGCG GTCGCCGCGACGAACGAGGCGGCGGCGCTGGCGAGCTCGTCGGACCACGTGGTCCTCTTC ATGGGGCTGAGCCAGAAGCAGGAGCAGGATGGTCTCGACAGGACGAGCCTGCTTCTCCCC GGCGAGCAGCAGGGCCTCATCACCGCCGTGGCGAACGCGGCGAGGCGGCCGGTGATCCTC GTTCTCCTCACCGGCGGGCCGGTGGACGTCACGTTCGCCAAGGACAACCCCAAGATCGGC GCCATCCTGTGGGCGGGCTACCCCGGCCAGGCCGGCGGGCTCGCCATCGCCAAGGTGCTC TTCGGCGACCACAACCCCAGCGGGAGGCTGCCGGTGACGTGGTACCCGGAGGAGTTCACC AAGGTCCCCATGACCGACATGCGGATGCGCGCCGACCCGGCCACCGGCTATCCCGGCCGG AGCTACCGCTTCTACCAGGGCAACACCGTCTACAACTTCGGCTACGGCCTCAGCTACTCC AAATTCTCTCGCCGCATGTTCTCCAGTTTCTCCACCTCCAACGCCGGTAACCTGAGCCTA CTCGCCGGAGTTATGGCGAGGCGAGCCGGAGACGACGGCGGTGGCATGAGCAGCTACCTA GTCAAGGAGATCGGCGTCGAGAGGTGCAGCCGGCTCGTCTTCCCGGCGGTGGTCGAGGTG CAGAACCACGGCCCCATGGACGGCAAGCACTCGGTGCTCATGTACCTCCGGTGGCCAACC ACGAGCGGCGGCCGGCCGGCGAGGCAGCTGATCGGGTTCCGGAGCCAGCATGTCAAGGTA GGGGAGAAGGCCATGGTGAGCTTCGAGGTGAGCCCGTGCGAGCATTTCAGCTGGGTGGGG GAGGACGGCGAGAGGGTGATCGATGGAGGGGCTCATTTTCTCATGGTTGGGGATGAGGAG TTGGAGACCAGCTTTGGCCTTTGGCGGTTGAGTTGA

Peptide Sequence

PEP ID	Os11t0291000-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:10575509:10582899:-1 gene:Os11g0291000 transcript:Os11t0291000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0291000-00)
Sequence	MADEPPYSCGPPPPPSSSLAAQGQQQQPHRFCDAWLTAEQRAADLVANLTLAEKVSQLGD RAAGVARLGVPAYEWWSEGLHGLSIWGRGIRFNGTVRAVTSFPQVILTAAAFDAGLWRRV GEAVGAEARALYNLGQANGLTIWSPNVNIFRDPRWGRGQETPGEDPVTASRYAVAFVTGL QGIGGEASACCKHATAYDLDYWNNVVRYNYDSKVTLQDLEDTYNPPFKSCVAEGKATCIM CGYNSINGVPACASSDLLTKKVRQEWGMNGYVASDCDAVATIRDAHHYTLSPEDTVAAMN LTEIVLQLSGMDVNCGNYTQVHAMAAVQKGNLTEKDIDRALVNLFAVRMRLGHFDGDPRS NAVYGHLGAADVCSPAHKSLALEAAQDGIVLLKNDAGALPLQPSAVTSLAVIGPNADNLG ALHGNYFGPPCETTTPLQGIKGYLGDRARFLAGCDSPACAVAATNEAAALASSSDHVVLF MGLSQKQEQDGLDRTSLLLPGEQQGLITAVANAARRPVILVLLTGGPVDVTFAKDNPKIG AILWAGYPGQAGGLAIAKVLFGDHNPSGRLPVTWYPEEFTKVPMTDMRMRADPATGYPGR SYRFYQGNTVYNFGYGLSYSKFSRRMFSSFSTSNAGNLSLLAGVMARRAGDDGGGMSSYL VKEIGVERCSRLVFPAVVEVQNHGPMDGKHSVLMYLRWPTTSGGRPARQLIGFRSQHVKV GEKAMVSFEVSPCEHFSWVGEDGERVIDGGAHFLMVGDEELETSFGLWRLS

Transcript Sequence

Transcript ID	Os11t0291000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:10575509:10582899:-1 gene:Os11g0291000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-D-xylosidase. (Os11t0291000-00)
Sequence	ATGGCCGACGAGCCGCCGTACTCGTGCGGGCCGCCGCCGCCGCCGTCGTCGTCGCTGGCG GCGCAGGGCCAGCAGCAGCAGCCGCACCGGTTCTGCGACGCGTGGCTGACGGCGGAGCAG CGGGCGGCGGACCTGGTGGCGAACCTGACGCTGGCCGAGAAGGTGTCCCAGCTCGGCGAC CGCGCGGCGGGCGTGGCGCGGCTGGGCGTGCCGGCGTACGAGTGGTGGTCGGAGGGGCTC CACGGCCTCTCCATCTGGGGCCGCGGCATCCGCTTCAACGGCACCGTCCGCGCCGTCACC AGCTTCCCGCAGGTGATCCTCACGGCGGCGGCGTTCGACGCCGGGCTGTGGCGGCGCGTC GGCGAGGCCGTGGGCGCGGAGGCGCGGGCGCTGTACAACCTCGGGCAGGCCAACGGGCTG ACCATCTGGTCCCCCAACGTGAACATCTTCAGGGACCCGAGGTGGGGACGCGGCCAGGAG ACGCCCGGCGAGGACCCCGTCACGGCGAGCAGGTACGCCGTGGCGTTCGTGACGGGGCTG CAGGGGATCGGCGGGGAGGCGTCCGCGTGCTGCAAGCACGCCACGGCGTACGACCTCGAC TACTGGAACAATGTCGTGCGGTACAACTACGATTCAAAGGTGACTCTCCAGGATCTTGAG GACACCTACAACCCGCCGTTCAAGAGCTGCGTAGCGGAAGGGAAGGCGACCTGCATCATG TGTGGTTACAACAGCATCAATGGCGTCCCTGCCTGTGCCAGCTCCGATCTCCTCACCAAG AAAGTAAGACAGGAATGGGGAATGAACGGGTATGTTGCTTCGGACTGTGATGCGGTGGCT ACTATACGCGACGCGCATCACTACACGTTATCGCCAGAGGATACAGTTGCTGCAATGAAT TTAACTGAAATCGTGTTGCAATTATCAGGAATGGACGTGAACTGCGGGAACTACACACAG GTGCACGCCATGGCCGCAGTCCAGAAGGGGAACCTGACGGAGAAGGACATCGACAGGGCC CTCGTCAACCTCTTCGCCGTCCGCATGCGCCTCGGCCACTTCGACGGCGACCCCAGGAGC AACGCCGTGTACGGCCACCTCGGCGCCGCGGACGTGTGCTCGCCAGCGCACAAGAGCCTC GCCCTCGAGGCAGCGCAGGACGGCATCGTCCTCCTCAAGAACGACGCCGGCGCCCTCCCG CTCCAGCCCTCGGCGGTCACCTCCCTCGCCGTGATCGGCCCCAACGCCGACAACCTCGGC GCTCTCCACGGCAACTACTTCGGCCCGCCGTGCGAGACCACCACGCCGCTGCAAGGGATC AAGGGGTACCTCGGCGACCGCGCGAGGTTCCTCGCCGGGTGCGACTCGCCGGCGTGCGCG GTCGCCGCGACGAACGAGGCGGCGGCGCTGGCGAGCTCGTCGGACCACGTGGTCCTCTTC ATGGGGCTGAGCCAGAAGCAGGAGCAGGATGGTCTCGACAGGACGAGCCTGCTTCTCCCC GGCGAGCAGCAGGGCCTCATCACCGCCGTGGCGAACGCGGCGAGGCGGCCGGTGATCCTC GTTCTCCTCACCGGCGGGCCGGTGGACGTCACGTTCGCCAAGGACAACCCCAAGATCGGC GCCATCCTGTGGGCGGGCTACCCCGGCCAGGCCGGCGGGCTCGCCATCGCCAAGGTGCTC TTCGGCGACCACAACCCCAGCGGGAGGCTGCCGGTGACGTGGTACCCGGAGGAGTTCACC AAGGTCCCCATGACCGACATGCGGATGCGCGCCGACCCGGCCACCGGCTATCCCGGCCGG AGCTACCGCTTCTACCAGGGCAACACCGTCTACAACTTCGGCTACGGCCTCAGCTACTCC AAATTCTCTCGCCGCATGTTCTCCAGTTTCTCCACCTCCAACGCCGGTAACCTGAGCCTA CTCGCCGGAGTTATGGCGAGGCGAGCCGGAGACGACGGCGGTGGCATGAGCAGCTACCTA GTCAAGGAGATCGGCGTCGAGAGGTGCAGCCGGCTCGTCTTCCCGGCGGTGGTCGAGGTG CAGAACCACGGCCCCATGGACGGCAAGCACTCGGTGCTCATGTACCTCCGGTGGCCAACC ACGAGCGGCGGCCGGCCGGCGAGGCAGCTGATCGGGTTCCGGAGCCAGCATGTCAAGGTA GGGGAGAAGGCCATGGTGAGCTTCGAGGTGAGCCCGTGCGAGCATTTCAGCTGGGTGGGG GAGGACGGCGAGAGGGTGATCGATGGAGGGGCTCATTTTCTCATGGTTGGGGATGAGGAG TTGGAGACCAGCTTTGGCCTTTGGCGGTTGAGTTGA