Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0286800-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:10360632:10376610:-1 gene:Os11g0286800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 10 description:Squalene cyclase domain containing protein. (Os11t0286800-01);Similar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cycloartenol synthase. (Os11t0286800-03);Similar to Cycloartenol synthase. (Os11t0286800-04)
Sequence	ATGTGGAAGCTAAAGTTTGGTGAGGGGGCAAGCAACCCACTGCTCCGCTCCAGCAACGGC TTCCTCGGCCGGGAGACGTGGGAGTTCGACCCCAACGGCGGCTCGCCGGAGGAGCACGCC GTGGTCGAGAGGCTCCGCCGCGACTTCACCCGCAACCGCTTCACACAGAGGGAGTGCAGC GACCTCCTGATGAGGATGCAGTTTGCAAAAGAGAACCAAGTTTACAGTAAACATGAAGTA AGCAATCTTAAAGACAGTTCAGAAGTCACAGAAGAAGTTCTATTAACGTCTTTAAGACGT GTTCTTGATCAATATTCCTCTTTGCAAGCACCAGATGGGTATTGGCCTGGTGGTTACAGC GGGATTTTGTTCATTCTGCCGCTCATGATATTTGCCTTACATGTGACTAAGTCACTAAAC GATGTCTTATCATCTGAGCATATACGTGAGATATGCCGCTACATCTACAACATTCAGAAT GAAGATGGGGGTTGGAGTACACATACTTTAGGCCCAAGCTCCATGTTTGGCTCATGTGTT AACTATGCTACCTTAAGGCTCTTAGGGGAGGTACTGGATGAACACAATGATGGATTATCA AAAGGGCGTGCCTGGATTCTGTCTCATGGCAGTGCAACTGTAGCACCACAATGGGCAAAG ATATATCTCTCGGTAATTGGTGTTTACGATTGGTCAGGGAACAATCCAATTATTCCAGAA CTATGGTTGCTTCCACATTTTCTTCCCATTCATCCAGGAAGATTTTGGTGCTTTTGCCGG ATGGTTTATATGCCAATGTCTTATATATATGCAAAAAGATTTATTGGGCCAATAACTCCA ACTATACTGGCACTAAGAGAAGAGCTCTATGATGTACCATACAACAAGATCAATTGGAAC AATGCTCGCATTTCTTGTTGCAAGGACGACATTATTTATCCTCCTTCGTGGTTCCAAAAC ATTGCTATGGCTTCTTTACATAAATTTATGGAACCACTATTTAATATGTGGCCAATGAAC AAGCTAAGAAAAAGAGCTTTGACCAACCTCATGGATCATATTCACTATGAAGATGAAAAC AGCAATTATGTGGGTTTATGCCCAATTAACAAGGTATTAAATATGATTTGCTGCTGGATA GAAAATCCGAACTCCAATGCATTCAGACGACACGTTCCAAGGATTCATGATTTCCTATGG CTTGCAGAAGATGGAATGAAGTCAAAGGTTAAACTTATACTTGTTTTATACTCTGAAAAT TGA

Peptide Sequence

PEP ID	Os11t0286800-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:10360632:10376610:-1 gene:Os11g0286800 transcript:Os11t0286800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 10 description:Squalene cyclase domain containing protein. (Os11t0286800-01);Similar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cycloartenol synthase. (Os11t0286800-03);Similar to Cycloartenol synthase. (Os11t0286800-04)
Sequence	MWKLKFGEGASNPLLRSSNGFLGRETWEFDPNGGSPEEHAVVERLRRDFTRNRFTQRECS DLLMRMQFAKENQVYSKHEVSNLKDSSEVTEEVLLTSLRRVLDQYSSLQAPDGYWPGGYS GILFILPLMIFALHVTKSLNDVLSSEHIREICRYIYNIQNEDGGWSTHTLGPSSMFGSCV NYATLRLLGEVLDEHNDGLSKGRAWILSHGSATVAPQWAKIYLSVIGVYDWSGNNPIIPE LWLLPHFLPIHPGRFWCFCRMVYMPMSYIYAKRFIGPITPTILALREELYDVPYNKINWN NARISCCKDDIIYPPSWFQNIAMASLHKFMEPLFNMWPMNKLRKRALTNLMDHIHYEDEN SNYVGLCPINKVLNMICCWIENPNSNAFRRHVPRIHDFLWLAEDGMKSKVKLILVLYSEN

Transcript Sequence

Transcript ID	Os11t0286800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:10360632:10376610:-1 gene:Os11g0286800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 10 description:Squalene cyclase domain containing protein. (Os11t0286800-01);Similar to Cycloartenol synthase. (Os11t0286800-02);Similar to Cycloartenol synthase. (Os11t0286800-03);Similar to Cycloartenol synthase. (Os11t0286800-04)
Sequence	AGTTCACCAACAGGAAGCTAAACAATATACGATGTGGAAGCTAAAGTTTGGTGAGGGGGC AAGCAACCCACTGCTCCGCTCCAGCAACGGCTTCCTCGGCCGGGAGACGTGGGAGTTCGA CCCCAACGGCGGCTCGCCGGAGGAGCACGCCGTGGTCGAGAGGCTCCGCCGCGACTTCAC CCGCAACCGCTTCACACAGAGGGAGTGCAGCGACCTCCTGATGAGGATGCAGTTTGCAAA AGAGAACCAAGTTTACAGTAAACATGAAGTAAGCAATCTTAAAGACAGTTCAGAAGTCAC AGAAGAAGTTCTATTAACGTCTTTAAGACGTGTTCTTGATCAATATTCCTCTTTGCAAGC ACCAGATGGGTATTGGCCTGGTGGTTACAGCGGGATTTTGTTCATTCTGCCGCTCATGAT ATTTGCCTTACATGTGACTAAGTCACTAAACGATGTCTTATCATCTGAGCATATACGTGA GATATGCCGCTACATCTACAACATTCAGAATGAAGATGGGGGTTGGAGTACACATACTTT AGGCCCAAGCTCCATGTTTGGCTCATGTGTTAACTATGCTACCTTAAGGCTCTTAGGGGA GGTACTGGATGAACACAATGATGGATTATCAAAAGGGCGTGCCTGGATTCTGTCTCATGG CAGTGCAACTGTAGCACCACAATGGGCAAAGATATATCTCTCGGTAATTGGTGTTTACGA TTGGTCAGGGAACAATCCAATTATTCCAGAACTATGGTTGCTTCCACATTTTCTTCCCAT TCATCCAGGAAGATTTTGGTGCTTTTGCCGGATGGTTTATATGCCAATGTCTTATATATA TGCAAAAAGATTTATTGGGCCAATAACTCCAACTATACTGGCACTAAGAGAAGAGCTCTA TGATGTACCATACAACAAGATCAATTGGAACAATGCTCGCATTTCTTGTTGCAAGGACGA CATTATTTATCCTCCTTCGTGGTTCCAAAACATTGCTATGGCTTCTTTACATAAATTTAT GGAACCACTATTTAATATGTGGCCAATGAACAAGCTAAGAAAAAGAGCTTTGACCAACCT CATGGATCATATTCACTATGAAGATGAAAACAGCAATTATGTGGGTTTATGCCCAATTAA CAAGGTATTAAATATGATTTGCTGCTGGATAGAAAATCCGAACTCCAATGCATTCAGACG ACACGTTCCAAGGATTCATGATTTCCTATGGCTTGCAGAAGATGGAATGAAGTCAAAGGT TAAACTTATACTTGTTTTATACTCTGAAAATTGACCATATACAACTTAGGGAACGTATTG TTATAAGCATGTTCTGCTCATATGTGCCGGCTTACAACAAACCGTTACATGTGGTATCAT GTGGTATTTTTATTCAGTACAACAGAAACCCTAATTGGTGCCGGTTAGGAAACCCCCCTT AGGTGCCGGTTTTCCCAACCGGCACCATAAAGGCCAGCATTAATGTGAAGAGAAATAGGT GCCGGTTTTCCCAACCGGCACCATAAAGGCCAGCATTAATGTGAAGAGAAATAGGTGCCA CGAATCC