Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0282300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:10068284:10069734:1 gene:Os11g0282300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os11t0282300-01)
Sequence

ATGACGTGGAGCTCCGACTCCGACCGCGACGACGAGCCGGCCACCGCCGCCGCCGCGTCG
GCCGACGACGCCTCCCTGGCGACTTCTTTCTTTCTGCAGCAGCCGGGGACGCCTCCCGCC
GCCGCGCCAGCGCCAGCGCGCAGGCGGAGGCACAAGAACCGGCGGCCGCGCGCGCACCGG
CGAGCCGCCGCCAAGAACGAGGAGGAGGAGGAGGTTGCGGGCACCGAGGACGTGTGGCGC
GGGGCGCAGTGGGAGGCGGCGTGGCCGCGGCGGGCGGCGGCGAGGCCGGTGGTGGTGGCC
GACGACGCCGCGGGCGCCGCCGCCGCGAGGGAGGACGCGCCCGGCGTTGGCGGGGAGGGC
GGCGGCCTCGGCGTGGGGCGGGCGAGGAGCCTGACCGACGACGACCTGGAGGAGCTCAAG
GGGTGCGTGGATCTGGGGTTCGGGTTCAGCTACGACGAGATCCCCGAGCTCTGCGGCACG
CTCCCGGCCCTCGAGCTCTGCTACTCCATGAGCCAGCGCTTCCTCGACGAACACTACCAC
TCGCCGGTGGCGGAGCCGGCTCCGGTGGCCCCCTCCTCCCCGGCGCAGCCCATCGCCAAC
TGGAAGATCTCCAGCCCTGGGGATAGCCCAGATGAGGTGAAGGCGAGGCTCAAGTATTGG
GCGCAGGCGGTCGCGTGCACCGTCAGGCTTTGCAGCTAA

Peptide Sequence

PEP ID

Os11t0282300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:10068284:10069734:1 gene:Os11g0282300 transcript:Os11t0282300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os11t0282300-01)
Sequence

MTWSSDSDRDDEPATAAAASADDASLATSFFLQQPGTPPAAAPAPARRRRHKNRRPRAHR
RAAAKNEEEEEVAGTEDVWRGAQWEAAWPRRAAARPVVVADDAAGAAAAREDAPGVGGEG
GGLGVGRARSLTDDDLEELKGCVDLGFGFSYDEIPELCGTLPALELCYSMSQRFLDEHYH
SPVAEPAPVAPSSPAQPIANWKISSPGDSPDEVKARLKYWAQAVACTVRLCS

Transcript Sequence

Transcript ID

Os11t0282300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:10068284:10069734:1 gene:Os11g0282300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 domain containing protein. (Os11t0282300-01)
Sequence

ACCCAGAGAGCGCGACGCGGAGACAGCAGAGCAACTATCGCGGCGAGAGCCCAACCACCA
CCCGCCGACGACGCGATGACGTGGAGCTCCGACTCCGACCGCGACGACGAGCCGGCCACC
GCCGCCGCCGCGTCGGCCGACGACGCCTCCCTGGCGACTTCTTTCTTTCTGCAGCAGCCG
GGGACGCCTCCCGCCGCCGCGCCAGCGCCAGCGCGCAGGCGGAGGCACAAGAACCGGCGG
CCGCGCGCGCACCGGCGAGCCGCCGCCAAGAACGAGGAGGAGGAGGAGGTTGCGGGCACC
GAGGACGTGTGGCGCGGGGCGCAGTGGGAGGCGGCGTGGCCGCGGCGGGCGGCGGCGAGG
CCGGTGGTGGTGGCCGACGACGCCGCGGGCGCCGCCGCCGCGAGGGAGGACGCGCCCGGC
GTTGGCGGGGAGGGCGGCGGCCTCGGCGTGGGGCGGGCGAGGAGCCTGACCGACGACGAC
CTGGAGGAGCTCAAGGGGTGCGTGGATCTGGGGTTCGGGTTCAGCTACGACGAGATCCCC
GAGCTCTGCGGCACGCTCCCGGCCCTCGAGCTCTGCTACTCCATGAGCCAGCGCTTCCTC
GACGAACACTACCACTCGCCGGTGGCGGAGCCGGCTCCGGTGGCCCCCTCCTCCCCGGCG
CAGCCCATCGCCAACTGGAAGATCTCCAGCCCTGGGGATAGCCCAGATGAGGTGAAGGCG
AGGCTCAAGTATTGGGCGCAGGCGGTCGCGTGCACCGTCAGGCTTTGCAGCTAATTGAAA
ACAGTAACATCAAATTGTTCCAAACAGCATCAAGACGAAGCAAAAATCAATCTCAATCCA
TCCATGGAGGCATCTGCAAGCAAAACTCCAAGAGAGAGACGTGTACATCTCAATTTTGAT
CACAAGCTGCCATATGCCTTCTGCCAAACTGCCCCGGAATCGCATCGGATCATCGCCGTC
GTCGCTATCAGCAGTAGAAGGTGAACCTGTATGAATTCATATTGTTCAATCTTGTCGACG
CGGATTTGGAATTATTCCAAGATGGTTGTAATCAGCAAGCAAAGCTAAGATGGATGCAGA
CTATGCCATTTGTGCGCGGCCTTAACTCACATATGAATCCTTGATTTAGCTTTTGAAACA
AAAACAAAGATATGAATCATGGATCCATGTAACAAATTGTATTCATGTAAACAAGATGTA
CAAAAGTATTCTTAAATCAAATGAAAGAATAATTAGCATTC