Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0276000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:9794920:9807643:1 gene:Os11g0276000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exocyst subunit Sec3 description:Similar to Roothairless 1. (Os11t0276000-01)
Sequence	ATGGCGCGGTCGAGCGCGGACGACATGGAGCTGAAGCGGTCGTGCGAGGCCGGGATCCTG AGCAAGGAGAAGGACCGGGAGACGGTGGTGATGTCGATGCGCGTCGCCAAGGGCCGCGGC GTCTGGGGCAAGGCCGGCAAGCTCGCCTCCCGCCACATGGCCAAGCCCCGCGTCCTCGCC GTCACCACCAAGAAGAAAGGGCAGCGCACCAAGGCGTTCGTCCGGGTCCTCAAGTACTCC AATGGCGGCGTCCTCGAGCCTGCCAAGGTGTACAAGATGAAGCACCTCTCCAAGGTGGAG GTCGTCCCCAACGATCCCAGCGGCTGCACATTCCTCCTGGGGTTTGATAACCTCCGGAGC CAGAGCGTGTCGCCTCCCCAATGGACGATGCGCAACAAGGACGACAGGAACCGCTTCCTC ATGTGCATCCTCAACATGTGCAAGGAGATATACGGTGCCATTCCAAAGGTTGTTGGCATG GACGTTGTGGAGATGGCTATGTGGGCAAAGGATAATACCACAGTAAAGGTTACTCAAGTG AGCACGAAAGATGGACCCATCGAATCACTAGTAGGAGAGGCTGACTCGCAAGTTGCCATT CAGAAAGACTTGGTCTTACAGACGGAAGATGAGGATACTGAGGCTCTCCTTGACACGTAT ATCATGGCCATTGGTGAAGCAGAGGCATTTTCAGAACGAATGAAGCGTGAACTCGTGGCA CTTGAATCTGCAAATGTTTATGCACTTATGGAAACTGAAACCGTGATAGAAGAGGTATTG GAGGGCTTAGAAATAGCTAGTATATGTGTTGAAGATTTTGATGAATGGCTTGGTATTTTC AATGTAAAGCTTAGGCATATGAGAGAGGATATACAATCTATAGAATGGCGTAATAACAAG TTAGAGCTACAATCTGATAGTAATGTGGCATTGATTGATGAGCTTGACAAAATGCTCGTG CTCCTGCAAATACCACCTGAGTATGAGGCATCTTTAACTGGAGGTTCATTCGATGAAGGC AACATGGTTAAGAACATTGAAGCTTGTGAGTGGTTGACCAGTGCTATAAAGAACCTAGAA GCATCGAATCTGGATCCCATATACGTGAAATTGCGTGCTGTAAGGGAGAAACGTGCAGAA TTTGTACTTCTAAAGTGCACATTTGTGCGGAGGGCATCCGAGTTTTTAAGGAATTACTTT CCCAGTTTGATTGATTTTATGCTAAATGACAAAGGCAACTTCTCACAGAGAGGGCAACTC CAGAGGCCTGACCATGCTGATATGAGGTACAAATGCAGGACATATGCCCGACTTCTACAG TTCATCAAGAACCTGGACAAGAGCTGTTTGATGCCTTTACGGAAATCTTACTGCCATTCT CTTAACTTGTTAATTCGACGGGAGGCTCGTGAGTTCTCCAGTGAACTCCGTGCTGGTTCA AAGGCATCGAAGAGCAGTACACCATTATTTGAGGGTCCTGCAAGTGCAAACCAGTCGATT AGTATTACCGATACTACTGCAGACGCATACTGCAAAATGATTACGGTTTTCATTCCACTG CTTGTTGACGAGAGCTCATTCTTTGCACATTTTATGTGCTTTGATGTTGCTGCGCTAGCT CCGTCAGATGAATCAGATAACAATAATCCTGTTGCTGTTTCAGAACCTCCTGGAAGCAGT GCCAAACCAATTAACAGTTCAGCTGAGTTGGGAGTACTAAACCAATTCCTTCAAGAGTTG CTTGATGGTATTCAGGAGGACTTCTATGCTATAGTTGACTGGGCATTCAAGCTAGATCCA TTGAGTTGTATATCAATGCATGGCATAACAGATCGCTATCTTTCTGGTCAGAAGGCAGAG GTTGCAGGATATGTGCATGTTTTGCTAGATGACTTGGAGACTAGAATATCCATTTTATTT AGCAGGTTTGTTGATGATGCCTGCTACCAGATTGAGAAGTATGAGCGCAATGTGCGGCAA ATTGGAGTTGTACCCTATATTCCGAGGTTCTCACAACTTGCAGCACGTATGGAGCAGTAT ATAAATGGATCCAGGGATCTAGTTGATCAGGCCTATACAAAAATTGTGACCATTATGTTT GTGACCCTCGAGAAAATTGCTCAAGTGGAACCTAAATATGTTGACATTGTACTATTGGAG AATTATGCAGCTTTCCAGCACAGTCTGTACGATTTAGCAAATGTTGTACCAACACTTGCT AAGTATTATCACCAAGCTAGTGAAGCTTATGAACAAGCTTGCTCACGCCACATCAATTTA GTCATATATATCCACTTCGAAAAATTATTCCAGTTTGCTCGGAAAATTGAGGAACTAATG TACAACATGAGCCCTGAGGAGATACCTTTCCAAGTTGGAATGTCGAAGGTAGACTTCCGT AAGATGTTGAAGTCCAGCTTAAGTGGTCTTGACAAGACAATCAATGCAATGTATAGAAAA CTACAGAAGAATATTACGGCTGAAGAATTACTTCCTTCTCTATGGGATAAATGCAAGAAG GAGTTTCTTGACAAATATGCAACCTTCCTCAAATTGATTTCCAAAATATATCCCAGTGAA ACAGTAATTTCAGTGAATGAAATGAAAGACACCCTAGCTTCCCTGTGA

Peptide Sequence

PEP ID	Os11t0276000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:9794920:9807643:1 gene:Os11g0276000 transcript:Os11t0276000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exocyst subunit Sec3 description:Similar to Roothairless 1. (Os11t0276000-01)
Sequence	MARSSADDMELKRSCEAGILSKEKDRETVVMSMRVAKGRGVWGKAGKLASRHMAKPRVLA VTTKKKGQRTKAFVRVLKYSNGGVLEPAKVYKMKHLSKVEVVPNDPSGCTFLLGFDNLRS QSVSPPQWTMRNKDDRNRFLMCILNMCKEIYGAIPKVVGMDVVEMAMWAKDNTTVKVTQV STKDGPIESLVGEADSQVAIQKDLVLQTEDEDTEALLDTYIMAIGEAEAFSERMKRELVA LESANVYALMETETVIEEVLEGLEIASICVEDFDEWLGIFNVKLRHMREDIQSIEWRNNK LELQSDSNVALIDELDKMLVLLQIPPEYEASLTGGSFDEGNMVKNIEACEWLTSAIKNLE ASNLDPIYVKLRAVREKRAEFVLLKCTFVRRASEFLRNYFPSLIDFMLNDKGNFSQRGQL QRPDHADMRYKCRTYARLLQFIKNLDKSCLMPLRKSYCHSLNLLIRREAREFSSELRAGS KASKSSTPLFEGPASANQSISITDTTADAYCKMITVFIPLLVDESSFFAHFMCFDVAALA PSDESDNNNPVAVSEPPGSSAKPINSSAELGVLNQFLQELLDGIQEDFYAIVDWAFKLDP LSCISMHGITDRYLSGQKAEVAGYVHVLLDDLETRISILFSRFVDDACYQIEKYERNVRQ IGVVPYIPRFSQLAARMEQYINGSRDLVDQAYTKIVTIMFVTLEKIAQVEPKYVDIVLLE NYAAFQHSLYDLANVVPTLAKYYHQASEAYEQACSRHINLVIYIHFEKLFQFARKIEELM YNMSPEEIPFQVGMSKVDFRKMLKSSLSGLDKTINAMYRKLQKNITAEELLPSLWDKCKK EFLDKYATFLKLISKIYPSETVISVNEMKDTLASL

Transcript Sequence

Transcript ID	Os11t0276000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:9794920:9807643:1 gene:Os11g0276000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exocyst subunit Sec3 description:Similar to Roothairless 1. (Os11t0276000-01)
Sequence	AGGAGAAAAAACCGCAACGTTCGATCGACGAGATCCAAATATTAATCCCACACAAATTAA AATCCAATCCATTTTCCAATTCCACATTCCATTCCATTCCCACATCGATCGGTCACTGCA CTCGCGCTCTCTTCGGACACCGTACGCACGCAGCGGCCGGCCGGCGACGTACGGCGAGAT CGGTGATTCGATCGATTGGGGGCGAGGGCCATGGCGCGGTCGAGCGCGGACGACATGGAG CTGAAGCGGTCGTGCGAGGCCGGGATCCTGAGCAAGGAGAAGGACCGGGAGACGGTGGTG ATGTCGATGCGCGTCGCCAAGGGCCGCGGCGTCTGGGGCAAGGCCGGCAAGCTCGCCTCC CGCCACATGGCCAAGCCCCGCGTCCTCGCCGTCACCACCAAGAAGAAAGGGCAGCGCACC AAGGCGTTCGTCCGGGTCCTCAAGTACTCCAATGGCGGCGTCCTCGAGCCTGCCAAGGTG TACAAGATGAAGCACCTCTCCAAGGTGGAGGTCGTCCCCAACGATCCCAGCGGCTGCACA TTCCTCCTGGGGTTTGATAACCTCCGGAGCCAGAGCGTGTCGCCTCCCCAATGGACGATG CGCAACAAGGACGACAGGAACCGCTTCCTCATGTGCATCCTCAACATGTGCAAGGAGATA TACGGTGCCATTCCAAAGGTTGTTGGCATGGACGTTGTGGAGATGGCTATGTGGGCAAAG GATAATACCACAGTAAAGGTTACTCAAGTGAGCACGAAAGATGGACCCATCGAATCACTA GTAGGAGAGGCTGACTCGCAAGTTGCCATTCAGAAAGACTTGGTCTTACAGACGGAAGAT GAGGATACTGAGGCTCTCCTTGACACGTATATCATGGCCATTGGTGAAGCAGAGGCATTT TCAGAACGAATGAAGCGTGAACTCGTGGCACTTGAATCTGCAAATGTTTATGCACTTATG GAAACTGAAACCGTGATAGAAGAGGTATTGGAGGGCTTAGAAATAGCTAGTATATGTGTT GAAGATTTTGATGAATGGCTTGGTATTTTCAATGTAAAGCTTAGGCATATGAGAGAGGAT ATACAATCTATAGAATGGCGTAATAACAAGTTAGAGCTACAATCTGATAGTAATGTGGCA TTGATTGATGAGCTTGACAAAATGCTCGTGCTCCTGCAAATACCACCTGAGTATGAGGCA TCTTTAACTGGAGGTTCATTCGATGAAGGCAACATGGTTAAGAACATTGAAGCTTGTGAG TGGTTGACCAGTGCTATAAAGAACCTAGAAGCATCGAATCTGGATCCCATATACGTGAAA TTGCGTGCTGTAAGGGAGAAACGTGCAGAATTTGTACTTCTAAAGTGCACATTTGTGCGG AGGGCATCCGAGTTTTTAAGGAATTACTTTCCCAGTTTGATTGATTTTATGCTAAATGAC AAAGGCAACTTCTCACAGAGAGGGCAACTCCAGAGGCCTGACCATGCTGATATGAGGTAC AAATGCAGGACATATGCCCGACTTCTACAGTTCATCAAGAACCTGGACAAGAGCTGTTTG ATGCCTTTACGGAAATCTTACTGCCATTCTCTTAACTTGTTAATTCGACGGGAGGCTCGT GAGTTCTCCAGTGAACTCCGTGCTGGTTCAAAGGCATCGAAGAGCAGTACACCATTATTT GAGGGTCCTGCAAGTGCAAACCAGTCGATTAGTATTACCGATACTACTGCAGACGCATAC TGCAAAATGATTACGGTTTTCATTCCACTGCTTGTTGACGAGAGCTCATTCTTTGCACAT TTTATGTGCTTTGATGTTGCTGCGCTAGCTCCGTCAGATGAATCAGATAACAATAATCCT GTTGCTGTTTCAGAACCTCCTGGAAGCAGTGCCAAACCAATTAACAGTTCAGCTGAGTTG GGAGTACTAAACCAATTCCTTCAAGAGTTGCTTGATGGTATTCAGGAGGACTTCTATGCT ATAGTTGACTGGGCATTCAAGCTAGATCCATTGAGTTGTATATCAATGCATGGCATAACA GATCGCTATCTTTCTGGTCAGAAGGCAGAGGTTGCAGGATATGTGCATGTTTTGCTAGAT GACTTGGAGACTAGAATATCCATTTTATTTAGCAGGTTTGTTGATGATGCCTGCTACCAG ATTGAGAAGTATGAGCGCAATGTGCGGCAAATTGGAGTTGTACCCTATATTCCGAGGTTC TCACAACTTGCAGCACGTATGGAGCAGTATATAAATGGATCCAGGGATCTAGTTGATCAG GCCTATACAAAAATTGTGACCATTATGTTTGTGACCCTCGAGAAAATTGCTCAAGTGGAA CCTAAATATGTTGACATTGTACTATTGGAGAATTATGCAGCTTTCCAGCACAGTCTGTAC GATTTAGCAAATGTTGTACCAACACTTGCTAAGTATTATCACCAAGCTAGTGAAGCTTAT GAACAAGCTTGCTCACGCCACATCAATTTAGTCATATATATCCACTTCGAAAAATTATTC CAGTTTGCTCGGAAAATTGAGGAACTAATGTACAACATGAGCCCTGAGGAGATACCTTTC CAAGTTGGAATGTCGAAGGTAGACTTCCGTAAGATGTTGAAGTCCAGCTTAAGTGGTCTT GACAAGACAATCAATGCAATGTATAGAAAACTACAGAAGAATATTACGGCTGAAGAATTA CTTCCTTCTCTATGGGATAAATGCAAGAAGGAGTTTCTTGACAAATATGCAACCTTCCTC AAATTGATTTCCAAAATATATCCCAGTGAAACAGTAATTTCAGTGAATGAAATGAAAGAC ACCCTAGCTTCCCTGTGACAACTTTGCTCTTGGAGCACATCTACAAGGTACATGTTCTTT GATTTTTGCTGTTGTGCTTTTTACATATTAGTACCATTTGTACTTTATTGTAGGATGTAT CGCATAATTATTTTATCTTTTTGGTCAAATGTATGTTTGAAGAAAATACAATTGAATTTG GTATTCACTAACATTATTTTGTCTCTTTTCAAAGACAGTATATAAGGCTTCTTTAAAACA TATCAACTTTTTACCTGATTTCATCAGAACTTAAATTGTTTGCTATGAAATACCTATATG TAAATAAGTCCTGAATTAGTGAGGACTGAACAAAAGAATCGGCCATGATTACCAAATGAA GTGCACTGTTTTT