Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0274700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:9724410:9728188:-1 gene:Os11g0274700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 322 description:Hypothetical conserved gene. (Os11t0274700-01)
Sequence

ATGGCGACATTCTGCAAGGTACGGAAAAGAGATGATGGTATCTACGTCCTGACGCTGGCC
AGCAGCGACGGCCACCACTATCTGACCACCGAAGCCATCACCCAGCTCAAGCAAGCCCTC
GAGAGAATCCGCAGCACCAAGGCGAGAGGCCTGGTGACGACCACCACGTCGGGCTCCTTC
TGCGACGGCATCAACGCCGTGTCGGATGACGACGACGACGAGCCGCTTTCTTCGTTGGAG
CGTGGCATGGCCGAGGTGGTGCGCCTGCTGCTGGACCTGCCGATGCCGACCGCCGCCGCC
GTCCGCGGCGACGCCAGGTGGCTGGGCTTCGTCCTGGCGCTGGCGCACGACCACCTGTTC
GTGCATACGGAGGCCGTGCTGGGATTGGCCGCCGCTGCCGACACGACGGCCAAGCCCCGA
CGGCGCCCGCTGCCGGACTACGTCGTGGCGCTCCTCCGGGAGAAGATACCGTACGCGCAG
CTGCGGAAGCTGCTCTTGCTCAAGGCGCACGTGTTCACCGGCGAGGAGCTCAAGGGGAAC
TGGCACTCGGTGCACGAGGCGATCCCCAATCGGGATCATGTGGTTGCTGTTGCTGTGCAG
AACCTCCAAAGCGTGGTTGTGGGAGACGGGATGGACTACGCCAAGGTGAGGCGGACCATG
TACACCAACAGCTGCGTGGCTGTTGCGGTGACGACGACGACGACGACCATGCTGCCTTTC
GATGGATCATCCAGCGTAGCCAACGGTGTGACGATAAGCAGTGAAATGACGCCTTCGGGG
GAATCCTTCAACTCAAGCTATAATTCAAGTACTACACCAGTGGATATAAGTCTAGCTGCC
ATAGAAGCCTGTACCGATGGATTTTCGGAATCAAAAAAAGTTGGGAGTGGTGCGTATGGA
AAGGTTTACAAGGGAGTTTACAACGAGGAGGAACTTGCATTCAAGAAGATTGATGGCTTG
GCCGTGCTTAACGAGGATCAATTCAAGAATGAACTTAAACACCTAATGAGTGTCCAGCAT
AGAAATATCGTTCGGTTTGTTGGTTACTGTTCTCAAATAAAAGAAAAATTCATCTGGCGA
GGAAAGGAATACGTTAGTGTTCAATATATAACAAGAATTCTGTGCTTTGAGTATTTGCCA
GGTGGAAGCCTTGACAAGCATCTGGATAAAGAATCTGAATCTGATGGATTTGACTGGCGC
ACACGATACAATATAATCAAGGTGATTTCCCAAGGATTAAATTACCTCCATGAATTGGAA
AAACCTATTTTCCACTTAGACCTGAAACCTGCCAATGTATTGCTTGATGAGAACATGGAG
CCAAAAATTGCAGACTTTGGGATATCAAAGCATTTCACTGGAACTAAAACTCACATAACA
ATATCAAAACCTACAGGCACACCTCGTTACATGCCGCCTGAGTATTTGAATAAACTCGTG
ATCTCAAATAAGTATGATGTATTCAGTTTTGGAGTTATGGTCATGGAAATCATTGCTGGG
CCTACTGGTTATGACAACTTCAGTGAAGCGAATGATCAAGACAGTTTTAAATATATTGAT
CGTGTGTATAAGCAATGGGAAAAGAGGATAACAGCAAAGTCGCACGATCCATCTGCAGAA
ATAAATCAAGTGAAAAGATGCATCAATATTGCGGTGAAGTGTTTAAATCAGAACAGAGAT
GATAGGCCCGAAATAAAGGCTATCGTGGGCGAACTAAATTAA

Peptide Sequence

PEP ID

Os11t0274700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:9724410:9728188:-1 gene:Os11g0274700 transcript:Os11t0274700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 322 description:Hypothetical conserved gene. (Os11t0274700-01)
Sequence

MATFCKVRKRDDGIYVLTLASSDGHHYLTTEAITQLKQALERIRSTKARGLVTTTTSGSF
CDGINAVSDDDDDEPLSSLERGMAEVVRLLLDLPMPTAAAVRGDARWLGFVLALAHDHLF
VHTEAVLGLAAAADTTAKPRRRPLPDYVVALLREKIPYAQLRKLLLLKAHVFTGEELKGN
WHSVHEAIPNRDHVVAVAVQNLQSVVVGDGMDYAKVRRTMYTNSCVAVAVTTTTTTMLPF
DGSSSVANGVTISSEMTPSGESFNSSYNSSTTPVDISLAAIEACTDGFSESKKVGSGAYG
KVYKGVYNEEELAFKKIDGLAVLNEDQFKNELKHLMSVQHRNIVRFVGYCSQIKEKFIWR
GKEYVSVQYITRILCFEYLPGGSLDKHLDKESESDGFDWRTRYNIIKVISQGLNYLHELE
KPIFHLDLKPANVLLDENMEPKIADFGISKHFTGTKTHITISKPTGTPRYMPPEYLNKLV
ISNKYDVFSFGVMVMEIIAGPTGYDNFSEANDQDSFKYIDRVYKQWEKRITAKSHDPSAE
INQVKRCINIAVKCLNQNRDDRPEIKAIVGELN

Transcript Sequence

Transcript ID

Os11t0274700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:9724410:9728188:-1 gene:Os11g0274700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 322 description:Hypothetical conserved gene. (Os11t0274700-01)
Sequence

AGTCTTATGATCTCCCCGGTTCCTCGAATAATGAGCAATGTGCAACGCCTAGCTAAGTTC
CTATTCCCGACCACCCAGTTATTCCGCTCGAGACAACAACAATGGCGACATTCTGCAAGG
TACGGAAAAGAGATGATGGTATCTACGTCCTGACGCTGGCCAGCAGCGACGGCCACCACT
ATCTGACCACCGAAGCCATCACCCAGCTCAAGCAAGCCCTCGAGAGAATCCGCAGCACCA
AGGCGAGAGGCCTGGTGACGACCACCACGTCGGGCTCCTTCTGCGACGGCATCAACGCCG
TGTCGGATGACGACGACGACGAGCCGCTTTCTTCGTTGGAGCGTGGCATGGCCGAGGTGG
TGCGCCTGCTGCTGGACCTGCCGATGCCGACCGCCGCCGCCGTCCGCGGCGACGCCAGGT
GGCTGGGCTTCGTCCTGGCGCTGGCGCACGACCACCTGTTCGTGCATACGGAGGCCGTGC
TGGGATTGGCCGCCGCTGCCGACACGACGGCCAAGCCCCGACGGCGCCCGCTGCCGGACT
ACGTCGTGGCGCTCCTCCGGGAGAAGATACCGTACGCGCAGCTGCGGAAGCTGCTCTTGC
TCAAGGCGCACGTGTTCACCGGCGAGGAGCTCAAGGGGAACTGGCACTCGGTGCACGAGG
CGATCCCCAATCGGGATCATGTGGTTGCTGTTGCTGTGCAGAACCTCCAAAGCGTGGTTG
TGGGAGACGGGATGGACTACGCCAAGGTGAGGCGGACCATGTACACCAACAGCTGCGTGG
CTGTTGCGGTGACGACGACGACGACGACCATGCTGCCTTTCGATGGATCATCCAGCGTAG
CCAACGGTGTGACGATAAGCAGTGAAATGACGCCTTCGGGGGAATCCTTCAACTCAAGCT
ATAATTCAAGTACTACACCAGTGGATATAAGTCTAGCTGCCATAGAAGCCTGTACCGATG
GATTTTCGGAATCAAAAAAAGTTGGGAGTGGTGCGTATGGAAAGGTTTACAAGGGAGTTT
ACAACGAGGAGGAACTTGCATTCAAGAAGATTGATGGCTTGGCCGTGCTTAACGAGGATC
AATTCAAGAATGAACTTAAACACCTAATGAGTGTCCAGCATAGAAATATCGTTCGGTTTG
TTGGTTACTGTTCTCAAATAAAAGAAAAATTCATCTGGCGAGGAAAGGAATACGTTAGTG
TTCAATATATAACAAGAATTCTGTGCTTTGAGTATTTGCCAGGTGGAAGCCTTGACAAGC
ATCTGGATAAAGAATCTGAATCTGATGGATTTGACTGGCGCACACGATACAATATAATCA
AGGTGATTTCCCAAGGATTAAATTACCTCCATGAATTGGAAAAACCTATTTTCCACTTAG
ACCTGAAACCTGCCAATGTATTGCTTGATGAGAACATGGAGCCAAAAATTGCAGACTTTG
GGATATCAAAGCATTTCACTGGAACTAAAACTCACATAACAATATCAAAACCTACAGGCA
CACCTCGTTACATGCCGCCTGAGTATTTGAATAAACTCGTGATCTCAAATAAGTATGATG
TATTCAGTTTTGGAGTTATGGTCATGGAAATCATTGCTGGGCCTACTGGTTATGACAACT
TCAGTGAAGCGAATGATCAAGACAGTTTTAAATATATTGATCGTGTGTATAAGCAATGGG
AAAAGAGGATAACAGCAAAGTCGCACGATCCATCTGCAGAAATAAATCAAGTGAAAAGAT
GCATCAATATTGCGGTGAAGTGTTTAAATCAGAACAGAGATGATAGGCCCGAAATAAAGG
CTATCGTGGGCGAACTAAATTAAGCTGAAAGTGTGCTTCCTACCTATAATTGACACATCA
ATCGAGCCAGAAGAAATCGGCGCATGCACCGCCTCCCATATATAGAAGTTGTGTGTTCAA
CTAGAGATACTCGTTATGTATTTGATGAGAGTTGTTGTAACATTTTAAACTAAAAGAATT
TATTTTTTCTCTTGTATGAATTGTTTT