Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0266800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:9156607:9173269:-1 gene:Os11g0266800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0266800-01)
Sequence	ATGTCGGACACGGAGGAGGAGCGCCGTCTAGGGCGCGGGTCGGCGGGGGCGGAGGCGGGG GCCGATGGGCAGGAGGACCCTGACGGGGATGAGGAGGAAGAGGAAGAGGAGGAGGAGGAG TACGAGTTCTGCGACGCCGAGGAGGCGATGCAGTGCGTGGAGATGGCGGAGCGGAGTGCC CCCGACGCCGGCGTGCATGACTACGAGGCGCTCGCCGCGCGCAAGCGCAAGGCCCTCGCC GAGGAGCGAACCGAAAGGGATGCATCTTCAAAGAAGCCAAGGCAGGATGGGCTTTCAGAA GTGGAAGCAGCGACTGTGTTTGACCAACTAATGGAAGGCTTTGGCCTTCGTAGGAAAAGA AGGTCCAAAGATGCCAGGAAAAGGGGAAGAAAGAAAGGAACAAGGAATAAGTACAGTCCT GAAGTTACTAAAAAATTGGGTGATGCCACACTGCTTTTTACAGAGAGCAGATTTAAGGAG GCAATTCCTATATTACATGAGGTTGTGCGGATCGCGCCGAATTTGTCAAATTCATACCAT CTACTTGGTAGCATTTATAAAGAGTGCGGTGAACTAGATAAAGCCATAAACTTTCTAATG CTCGCTGCATATGTTTCTCCAAAGGATGTATTTTTGTGGAAGAAACTCATTGACATGGCA TTGAAAAAGGAAGATGCTGCTTTAGCAAGACACTGTGTTTTAAAAGCGATGAGAGCAGAT CCTGAAGATGTAGGACTGAAGTTTGATTGTGCTAATATATATCGCGCTTTGCATGACTAT CAGAAAGCTGGAGAGATATACGAGCAGATAGTCAGAATTTATCCTTCAAACATTGTTGCT CGTAAAGCAGCAGCACAGATGTACAGGGACTGTGGTCAAATTGATAAAGCTATTAATTTA TTGGAGGATTATGTGAATGCTCAAACTACAAACATCGACTCGAATCATCTGGATCTACTG ATATCCCTTTATCTGAGAAATAATGCCTATAATGAAGCATTGAGGCTGATTGAGAGAGCA CATATAGTGTTTGGATCTCAACACAATTTGCCAGTACAATTGCAGGCAAAAGCTGTAATC TGCCATGCTTATCTTGGAGATATGAAGCATGCCGAGGTGTTTCTTCAGAATGTGCATCTG GAGCGTTCAAAAGATAACACCGATGTGATCAAGGAGGTTGCTAGCACTCTCGAAAATTTA GGACAATATGAGTATGCAATAAAGTTTTACCTGATGATTGAAGATGTTGCTGTTCATAAT GATGGTAGTTCATATGTGAAAGTTGGTCAATGCTACATGGTCATAGGGGAGAAAAGGAAA GCAATTCCTTACTTTCAGAAAGCCTTGCAAAGAATGGAGGACAACATTGATGTGCGAATA ACTTTATCCTCTCTTTTTGTTGATGTGGATAAGAGTGACGAAGCTATTGTTTTGCTTTCT CCTCCTAACAATTCAGGGTCAAAGTCTGCTACAGATCAACCGAAGCCATGGTGGCTTGAT GGGAAAGTAAAGATGCACCTTGCGAACATATATTACAATAAAGGCATGTTCGAGGACTTT GTGGGCACCATTCTTATACCCATTCTTGAAACACTGAATATTGAGTATGCTAATCGAAAG GTGAGGAAAGCTAAAAAACTTCCAACTAATGTTCTATATGAAAGAGCCAAAGTGTTAGCT GAACAACGTCCAGAAAGCGTGTTTCAAGGATTAAGGCCAATAGCATCACCGGCAGAGTTA CAAAAGGCAAGCAGAGCAAAGAAGTTGCTAGAGAAAAGAGCAGCTTCGAATGAAGATACG ATAAAAGATGATCTGCAAAGGTCGAAGCAAATACCTCCGATATCTGGTCTACTTACGAAT GCAGAGAACCATCAACTTGTGTTACATCTTTGCCAAACATTAGCTTTGCTTCACCGATAC TGGGAGGCTCTACAAGTTATCAACCGTACTCTTAAACTTGGAAATGATACTCTCGCTGAT GAGAACAAAGAGGAGCTCAGATCCTTGGGTGCTCAAATAGCTTATAGAGCTCCAGACCCT AGACATGGCTTTAATTATGTCCGCTATGTAGTTCAGCAGCATCCATATTCCCTTGCTGCA TGGAACTCATACTACAAGGTGACATCAAGAATAGAAGATAGGTTCTCACGTCATCATAAA TTTCTTCTACGGACAAGAGAAGAAAAGACTGACTGTGTGCCTCCTATAATCATATCTGGC CATCGATTTACGGCTATCAGCCAGCATCAGTCAGCTGCTCGTGATTATCTGGAAGCTTAT AAATTGAACCCAGAAAATCCATTTATAAATCTCTGTGTTGGATCTGCTCTAATTAATTTA GCCCTTGGCTTTAGGCTTCAGAATAAGAACCAGTGCATCGTTCAAGCTTTGGCATTCCTC TTTCGATATCTGCGTCTTTGTGACAACAGCCAGGAAGCCTTGTACAACATCGCTCGGGCG TATCATCATGTTGGCCTCAACACCTTGGCAGCAATTTACTACGAGAAGGCTTTAGCCGTT GAGGTGAAAGATTACCCTATTCCCAGGCTTCCATACGAGGAGAATTCCTGTGCCCAGCAG GATCTCAAGCCAGGGTATTGCGATGTACGAAGAGAGGCTGCGTTCAATTTGCATCTGATT TACAAGAAAAGCGGAGCAGATGATCTCGCCAGACGGATTCTTAGGACTTACTGTACTATT TAG

Peptide Sequence

PEP ID	Os11t0266800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:9156607:9173269:-1 gene:Os11g0266800 transcript:Os11t0266800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0266800-01)
Sequence	MSDTEEERRLGRGSAGAEAGADGQEDPDGDEEEEEEEEEEYEFCDAEEAMQCVEMAERSA PDAGVHDYEALAARKRKALAEERTERDASSKKPRQDGLSEVEAATVFDQLMEGFGLRRKR RSKDARKRGRKKGTRNKYSPEVTKKLGDATLLFTESRFKEAIPILHEVVRIAPNLSNSYH LLGSIYKECGELDKAINFLMLAAYVSPKDVFLWKKLIDMALKKEDAALARHCVLKAMRAD PEDVGLKFDCANIYRALHDYQKAGEIYEQIVRIYPSNIVARKAAAQMYRDCGQIDKAINL LEDYVNAQTTNIDSNHLDLLISLYLRNNAYNEALRLIERAHIVFGSQHNLPVQLQAKAVI CHAYLGDMKHAEVFLQNVHLERSKDNTDVIKEVASTLENLGQYEYAIKFYLMIEDVAVHN DGSSYVKVGQCYMVIGEKRKAIPYFQKALQRMEDNIDVRITLSSLFVDVDKSDEAIVLLS PPNNSGSKSATDQPKPWWLDGKVKMHLANIYYNKGMFEDFVGTILIPILETLNIEYANRK VRKAKKLPTNVLYERAKVLAEQRPESVFQGLRPIASPAELQKASRAKKLLEKRAASNEDT IKDDLQRSKQIPPISGLLTNAENHQLVLHLCQTLALLHRYWEALQVINRTLKLGNDTLAD ENKEELRSLGAQIAYRAPDPRHGFNYVRYVVQQHPYSLAAWNSYYKVTSRIEDRFSRHHK FLLRTREEKTDCVPPIIISGHRFTAISQHQSAARDYLEAYKLNPENPFINLCVGSALINL ALGFRLQNKNQCIVQALAFLFRYLRLCDNSQEALYNIARAYHHVGLNTLAAIYYEKALAV EVKDYPIPRLPYEENSCAQQDLKPGYCDVRREAAFNLHLIYKKSGADDLARRILRTYCTI

Transcript Sequence

Transcript ID	Os11t0266800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:9156607:9173269:-1 gene:Os11g0266800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os11t0266800-01)
Sequence	ACACTAGCCAGCCGCCGCCGCCGCCGTCCTCCGCCGCCGCAGCATCGCCGTCGACCTCTC GTCTTCTCCCTCCCCGGCGTCTCGCCTGCACCACCGCGCCTCCCGCCTCTAGGTTTCACT AACATTGGTAACCGCAGCTCCGGCCTCCGGGGCCCCGGTAGCTCGCCGCTGCTGCGCCGA ACCCTCTATTCCGTCGCACTCCGGTGATGTCGGACACGGAGGAGGAGCGCCGTCTAGGGC GCGGGTCGGCGGGGGCGGAGGCGGGGGCCGATGGGCAGGAGGACCCTGACGGGGATGAGG AGGAAGAGGAAGAGGAGGAGGAGGAGTACGAGTTCTGCGACGCCGAGGAGGCGATGCAGT GCGTGGAGATGGCGGAGCGGAGTGCCCCCGACGCCGGCGTGCATGACTACGAGGCGCTCG CCGCGCGCAAGCGCAAGGCCCTCGCCGAGGAGCGAACCGAAAGGGATGCATCTTCAAAGA AGCCAAGGCAGGATGGGCTTTCAGAAGTGGAAGCAGCGACTGTGTTTGACCAACTAATGG AAGGCTTTGGCCTTCGTAGGAAAAGAAGGTCCAAAGATGCCAGGAAAAGGGGAAGAAAGA AAGGAACAAGGAATAAGTACAGTCCTGAAGTTACTAAAAAATTGGGTGATGCCACACTGC TTTTTACAGAGAGCAGATTTAAGGAGGCAATTCCTATATTACATGAGGTTGTGCGGATCG CGCCGAATTTGTCAAATTCATACCATCTACTTGGTAGCATTTATAAAGAGTGCGGTGAAC TAGATAAAGCCATAAACTTTCTAATGCTCGCTGCATATGTTTCTCCAAAGGATGTATTTT TGTGGAAGAAACTCATTGACATGGCATTGAAAAAGGAAGATGCTGCTTTAGCAAGACACT GTGTTTTAAAAGCGATGAGAGCAGATCCTGAAGATGTAGGACTGAAGTTTGATTGTGCTA ATATATATCGCGCTTTGCATGACTATCAGAAAGCTGGAGAGATATACGAGCAGATAGTCA GAATTTATCCTTCAAACATTGTTGCTCGTAAAGCAGCAGCACAGATGTACAGGGACTGTG GTCAAATTGATAAAGCTATTAATTTATTGGAGGATTATGTGAATGCTCAAACTACAAACA TCGACTCGAATCATCTGGATCTACTGATATCCCTTTATCTGAGAAATAATGCCTATAATG AAGCATTGAGGCTGATTGAGAGAGCACATATAGTGTTTGGATCTCAACACAATTTGCCAG TACAATTGCAGGCAAAAGCTGTAATCTGCCATGCTTATCTTGGAGATATGAAGCATGCCG AGGTGTTTCTTCAGAATGTGCATCTGGAGCGTTCAAAAGATAACACCGATGTGATCAAGG AGGTTGCTAGCACTCTCGAAAATTTAGGACAATATGAGTATGCAATAAAGTTTTACCTGA TGATTGAAGATGTTGCTGTTCATAATGATGGTAGTTCATATGTGAAAGTTGGTCAATGCT ACATGGTCATAGGGGAGAAAAGGAAAGCAATTCCTTACTTTCAGAAAGCCTTGCAAAGAA TGGAGGACAACATTGATGTGCGAATAACTTTATCCTCTCTTTTTGTTGATGTGGATAAGA GTGACGAAGCTATTGTTTTGCTTTCTCCTCCTAACAATTCAGGGTCAAAGTCTGCTACAG ATCAACCGAAGCCATGGTGGCTTGATGGGAAAGTAAAGATGCACCTTGCGAACATATATT ACAATAAAGGCATGTTCGAGGACTTTGTGGGCACCATTCTTATACCCATTCTTGAAACAC TGAATATTGAGTATGCTAATCGAAAGGTGAGGAAAGCTAAAAAACTTCCAACTAATGTTC TATATGAAAGAGCCAAAGTGTTAGCTGAACAACGTCCAGAAAGCGTGTTTCAAGGATTAA GGCCAATAGCATCACCGGCAGAGTTACAAAAGGCAAGCAGAGCAAAGAAGTTGCTAGAGA AAAGAGCAGCTTCGAATGAAGATACGATAAAAGATGATCTGCAAAGGTCGAAGCAAATAC CTCCGATATCTGGTCTACTTACGAATGCAGAGAACCATCAACTTGTGTTACATCTTTGCC AAACATTAGCTTTGCTTCACCGATACTGGGAGGCTCTACAAGTTATCAACCGTACTCTTA AACTTGGAAATGATACTCTCGCTGATGAGAACAAAGAGGAGCTCAGATCCTTGGGTGCTC AAATAGCTTATAGAGCTCCAGACCCTAGACATGGCTTTAATTATGTCCGCTATGTAGTTC AGCAGCATCCATATTCCCTTGCTGCATGGAACTCATACTACAAGGTGACATCAAGAATAG AAGATAGGTTCTCACGTCATCATAAATTTCTTCTACGGACAAGAGAAGAAAAGACTGACT GTGTGCCTCCTATAATCATATCTGGCCATCGATTTACGGCTATCAGCCAGCATCAGTCAG CTGCTCGTGATTATCTGGAAGCTTATAAATTGAACCCAGAAAATCCATTTATAAATCTCT GTGTTGGATCTGCTCTAATTAATTTAGCCCTTGGCTTTAGGCTTCAGAATAAGAACCAGT GCATCGTTCAAGCTTTGGCATTCCTCTTTCGATATCTGCGTCTTTGTGACAACAGCCAGG AAGCCTTGTACAACATCGCTCGGGCGTATCATCATGTTGGCCTCAACACCTTGGCAGCAA TTTACTACGAGAAGGCTTTAGCCGTTGAGGTGAAAGATTACCCTATTCCCAGGCTTCCAT ACGAGGAGAATTCCTGTGCCCAGCAGGATCTCAAGCCAGGGTATTGCGATGTACGAAGAG AGGCTGCGTTCAATTTGCATCTGATTTACAAGAAAAGCGGAGCAGATGATCTCGCCAGAC GGATTCTTAGGACTTACTGTACTATTTAGTAGTAGATAGAATTATACATGTATATATTTG GTATTTGCTAGTGTTCAGGTGACTGGGAACTGCACAAATTTTAGTTGAATTTTGTGGCCG TCCATTTCTCTTCAAGATTTGTGCACG