Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0265400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:9073778:9078781:1 gene:Os11g0265400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os11t0265400-01)
Sequence

ATGGTCCTCCCCGTCCTCGCGCCCCTCGCCGGCGCCACCGCCGTCGCCTTCCTCCTCTTC
AAGTTCGCCACCGTCGATGGGGATTTCACGCTGGTCTCGCGCGGGGCGCCGCGGCGGGAG
AAGGTGGACGGGAAGGTTGTGTGGATCACTGGAGCCAGCCGCGGGATAGGGGAAGTTCTT
GCAATGCAATTTGCTAGTTTAGGAGCAAAGCTGATACTATCTGCTCGGAACAAGGAGGAG
CTTGAGAGAGTGAAACATAACATCATCAACAAGCATCCAAATAGCAGAGTTGAAGTATTA
CCCATGGATTTATCATCGGGTGAAGAGTCTCTGAAAGAGCATGTACATGAAGCAGAGTCA
CTCTTCTCCAATGCAGGCGTTGACTATATGATCCATAATGCAGCATTTGAGCGTCCAAAA
AGGAGGGCTCTGGAAGAAACTGAACAAGGTCTTAAGGCTACTTTTGATGTCAATGTCTTT
GGTACTATTACTCTAACTCGCCTTCTTGCACCCTCAATGATGGATAGAGGGATGGGCCAT
TTTGTTGTGATGAGTAGTGCAGCTGGAAAGGTTCCATCACCTGGCCAGGCTCTTTATTCA
GCCTCCAAACATGCCCTCAATGGCTATTTTTCTTCTCTGCGCTCTGAGTTATGTACAAAA
GGCATTAAGGTTACTGTTGTCTGTCCTGGGCCGATCGAAGCACCCCAATCTTCTGGTGCA
ACCTCTTCATCACAAAAACCATCTTCTGAGAAACGTGTTCCAGTTGAAAGATGCGCTGAA
CTGACAATTGTTGCAGCAACTCACGGACTAAAAGAAGCATGGATATCATATCAGCCTGTG
CTAGGGGTTATGTACTTGGTGCAATACATGCCGACGGTTGGTCTCTGGCTTATGGACAAG
GTTGGTGCAAAGCGGCTGGATGTAGCAGCAAAGAAAGGCAATGCGTACGGTTGGAATCTC
CTTTTCGGTGGCAAGAAGTCAGCATGA

Peptide Sequence

PEP ID

Os11t0265400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:9073778:9078781:1 gene:Os11g0265400 transcript:Os11t0265400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os11t0265400-01)
Sequence

MVLPVLAPLAGATAVAFLLFKFATVDGDFTLVSRGAPRREKVDGKVVWITGASRGIGEVL
AMQFASLGAKLILSARNKEELERVKHNIINKHPNSRVEVLPMDLSSGEESLKEHVHEAES
LFSNAGVDYMIHNAAFERPKRRALEETEQGLKATFDVNVFGTITLTRLLAPSMMDRGMGH
FVVMSSAAGKVPSPGQALYSASKHALNGYFSSLRSELCTKGIKVTVVCPGPIEAPQSSGA
TSSSQKPSSEKRVPVERCAELTIVAATHGLKEAWISYQPVLGVMYLVQYMPTVGLWLMDK
VGAKRLDVAAKKGNAYGWNLLFGGKKSA

Transcript Sequence

Transcript ID

Os11t0265400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:9073778:9078781:1 gene:Os11g0265400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucose/ribitol dehydrogenase family protein. (Os11t0265400-01)
Sequence

ACCGTTGATAACTTGATACTCTCCCGATTTGACGAACGCAAAGCACGCACACGATGAGGC
TCACGACGAAATCGAAAAGCCGCTGCTTAGACTGAACACACCACACACGAGCACGAGCAC
GGAGAAGTCGAGAGAGAGAGAAGAGAGATGGTCCTCCCCGTCCTCGCGCCCCTCGCCGGC
GCCACCGCCGTCGCCTTCCTCCTCTTCAAGTTCGCCACCGTCGATGGGGATTTCACGCTG
GTCTCGCGCGGGGCGCCGCGGCGGGAGAAGGTGGACGGGAAGGTTGTGTGGATCACTGGA
GCCAGCCGCGGGATAGGGGAAGTTCTTGCAATGCAATTTGCTAGTTTAGGAGCAAAGCTG
ATACTATCTGCTCGGAACAAGGAGGAGCTTGAGAGAGTGAAACATAACATCATCAACAAG
CATCCAAATAGCAGAGTTGAAGTATTACCCATGGATTTATCATCGGGTGAAGAGTCTCTG
AAAGAGCATGTACATGAAGCAGAGTCACTCTTCTCCAATGCAGGCGTTGACTATATGATC
CATAATGCAGCATTTGAGCGTCCAAAAAGGAGGGCTCTGGAAGAAACTGAACAAGGTCTT
AAGGCTACTTTTGATGTCAATGTCTTTGGTACTATTACTCTAACTCGCCTTCTTGCACCC
TCAATGATGGATAGAGGGATGGGCCATTTTGTTGTGATGAGTAGTGCAGCTGGAAAGGTT
CCATCACCTGGCCAGGCTCTTTATTCAGCCTCCAAACATGCCCTCAATGGCTATTTTTCT
TCTCTGCGCTCTGAGTTATGTACAAAAGGCATTAAGGTTACTGTTGTCTGTCCTGGGCCG
ATCGAAGCACCCCAATCTTCTGGTGCAACCTCTTCATCACAAAAACCATCTTCTGAGAAA
CGTGTTCCAGTTGAAAGATGCGCTGAACTGACAATTGTTGCAGCAACTCACGGACTAAAA
GAAGCATGGATATCATATCAGCCTGTGCTAGGGGTTATGTACTTGGTGCAATACATGCCG
ACGGTTGGTCTCTGGCTTATGGACAAGGTTGGTGCAAAGCGGCTGGATGTAGCAGCAAAG
AAAGGCAATGCGTACGGTTGGAATCTCCTTTTCGGTGGCAAGAAGTCAGCATGATGAAGT
TGTCCAATAATAGGGGAGTCAAAATGGCTGTATAAATTTGTGGATTCTGAACATACGGAT
TTTGGTATTTACTTTTACTACTGTTACAGTAGCACCTTACCT