Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0262500-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:8860655:8862772:1 gene:Os11g0262500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 597 description:Similar to F-box domain containing protein. (Os11t0262500-00)
Sequence

ATGCCTGAGAAGTTTACAAATGAAGGAAACAAGAAAGTGGTCATGGCTGATGGGGCAGAC
CACATAAGCGCTCTCCCGGATGAGCTCCTCCAATACCTGCTCTCCTTCATTCCATCACGT
GAGGCCGTGCAGACGTGTGTGCTCTCCCAGCGTTGGCGCCACCAATGGAAGTATGTGCCT
GCCCTTCGAATAAACGACGTCGACAGTTTCTACAGTGTTCAGCAGCTGAACAAGTTTGTC
CACCACCTTCTGCTGCACCGCAAACGGACTCCTCTGTATGTATGTGAGCTTGATTCTTTT
CGCAATGGGGAAGTTGCAGAATGGTACCAATATGCTGTATCATGTGAAGTTGAGATGCTT
CAGGTAGACACTGCCCATTCAGCTGATTATTGTCGATTACCCGAGATGGCTATCACCTCC
AACCACTTGACAACACTAGAATTTAGTGGTGTGCAGCTGGGGCATATCTCTCTAGATTTT
TCAGGTTGCCTGAAATTGGAGGTATTAGTGATGCGCGGGTGTAAAATCTTGGTGCAGAAG
ATATTGTCCCAATCAGTTAGAAGTTTGAGCATAACTCAGTGCAATTTTGAGCTCAATACT
CGCACTCATATTTCAGCTCCTAGTCTTATTTCTTTAGAACTTGCTGATATTCTGGGCTGG
ACTCCTGCACTTGAGAGATTGCCATCATTATCAACAGCATTTGTCAGGCTGGATGATCGT
TGTGAAGACTATTGCTTACACAGTTACTATGGGGATTGTGGCGATCAAGTTTCATGTGGA
AAATACTGCACTAGATTCTATGATGTCCATGATGATGATTGTGTGCTTCTTGGTGGTCTG
TCGAACGTCACCAATTTAGAGTTGATAACTTCACCTAAAGTGTTCATTGTCAGAAAGGAT
TTGCTTATGCGCCCAACGTTTAGCAAGCTAAAAACATTATTGCTTAATGTTTCGGATGCG
GATGCTGGCTTCGGCCCATTGGTTTACATTTTGAGGAGCTCTCCAGTACTAGAGAAGCTT
ACTCTTCAACTGTATGAGGAACCAAAAGCTAAGATAGAAACAGATGGAAGCTGCAACCTA
GAGGAGCAATTGGTGGCATCCAAGAAACTGAAAGTAGTTGAAATCAAATATTCGAAAATT
GTAGTGCTTTGCAGAGTTTTACAGATTCTCAACACTTGTGGTGTACCTCGCAAGAAAATT
AACATTGAACGTACGGAGTTGTGGTCTTTTGGAAGTAAGTTAACTGCAGACATTCATCAT
TTCTCTCATATCTCCCATGTCAGCTTGTGTGTATCTACCATCTAG

Peptide Sequence

PEP ID

Os11t0262500-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:8860655:8862772:1 gene:Os11g0262500 transcript:Os11t0262500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 597 description:Similar to F-box domain containing protein. (Os11t0262500-00)
Sequence

MPEKFTNEGNKKVVMADGADHISALPDELLQYLLSFIPSREAVQTCVLSQRWRHQWKYVP
ALRINDVDSFYSVQQLNKFVHHLLLHRKRTPLYVCELDSFRNGEVAEWYQYAVSCEVEML
QVDTAHSADYCRLPEMAITSNHLTTLEFSGVQLGHISLDFSGCLKLEVLVMRGCKILVQK
ILSQSVRSLSITQCNFELNTRTHISAPSLISLELADILGWTPALERLPSLSTAFVRLDDR
CEDYCLHSYYGDCGDQVSCGKYCTRFYDVHDDDCVLLGGLSNVTNLELITSPKVFIVRKD
LLMRPTFSKLKTLLLNVSDADAGFGPLVYILRSSPVLEKLTLQLYEEPKAKIETDGSCNL
EEQLVASKKLKVVEIKYSKIVVLCRVLQILNTCGVPRKKINIERTELWSFGSKLTADIHH
FSHISHVSLCVSTI

Transcript Sequence

Transcript ID

Os11t0262500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:8860655:8862772:1 gene:Os11g0262500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 597 description:Similar to F-box domain containing protein. (Os11t0262500-00)
Sequence

TGGCTCTGATGCTGGGAATATGTTTACAGAATGCCTGAGAAGTTTACAAATGAAGGAAAC
AAGAAAGTGGTCATGGCTGATGGGGCAGACCACATAAGCGCTCTCCCGGATGAGCTCCTC
CAATACCTGCTCTCCTTCATTCCATCACGTGAGGCCGTGCAGACGTGTGTGCTCTCCCAG
CGTTGGCGCCACCAATGGAAGTATGTGCCTGCCCTTCGAATAAACGACGTCGACAGTTTC
TACAGTGTTCAGCAGCTGAACAAGTTTGTCCACCACCTTCTGCTGCACCGCAAACGGACT
CCTCTGTATGTATGTGAGCTTGATTCTTTTCGCAATGGGGAAGTTGCAGAATGGTACCAA
TATGCTGTATCATGTGAAGTTGAGATGCTTCAGGTAGACACTGCCCATTCAGCTGATTAT
TGTCGATTACCCGAGATGGCTATCACCTCCAACCACTTGACAACACTAGAATTTAGTGGT
GTGCAGCTGGGGCATATCTCTCTAGATTTTTCAGGTTGCCTGAAATTGGAGGTATTAGTG
ATGCGCGGGTGTAAAATCTTGGTGCAGAAGATATTGTCCCAATCAGTTAGAAGTTTGAGC
ATAACTCAGTGCAATTTTGAGCTCAATACTCGCACTCATATTTCAGCTCCTAGTCTTATT
TCTTTAGAACTTGCTGATATTCTGGGCTGGACTCCTGCACTTGAGAGATTGCCATCATTA
TCAACAGCATTTGTCAGGCTGGATGATCGTTGTGAAGACTATTGCTTACACAGTTACTAT
GGGGATTGTGGCGATCAAGTTTCATGTGGAAAATACTGCACTAGATTCTATGATGTCCAT
GATGATGATTGTGTGCTTCTTGGTGGTCTGTCGAACGTCACCAATTTAGAGTTGATAACT
TCACCTAAAGTGTTCATTGTCAGAAAGGATTTGCTTATGCGCCCAACGTTTAGCAAGCTA
AAAACATTATTGCTTAATGTTTCGGATGCGGATGCTGGCTTCGGCCCATTGGTTTACATT
TTGAGGAGCTCTCCAGTACTAGAGAAGCTTACTCTTCAACTGTATGAGGAACCAAAAGCT
AAGATAGAAACAGATGGAAGCTGCAACCTAGAGGAGCAATTGGTGGCATCCAAGAAACTG
AAAGTAGTTGAAATCAAATATTCGAAAATTGTAGTGCTTTGCAGAGTTTTACAGATTCTC
AACACTTGTGGTGTACCTCGCAAGAAAATTAACATTGAACGTACGGAGTTGTGGTCTTTT
GGAAGTAAGTTAACTGCAGACATTCATCATTTCTCTCATATCTCCCATGTCAGCTTGTGT
GTATCTACCATCTAG