Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0261900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:8826309:8827815:1 gene:Os11g0261900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os11t0261900-01)
Sequence

ATGGCCACCGCCGCCGCCGCCGATGTCCCCTCCTGCCGCGACCTCCCCGCCGCCGTCTCC
GCCTTCGCCGACGCCTTCGTCGACTTCGCTGTCTCCGGCATCTTCTTCCCCTCCACCCCA
ACCCCCTCACCCCCTCCTCCCCCTACGCCAACCACCTTCCTCCCTTCCCCCACCCGCCTC
GTCGCCATCGGCGACCTCCACGGCGACCTCCCCAAGTCCCTCTCCGCCCTCCGCCTCGCC
GGCCTCGTCCCTCCCCACGACCCCACCTCCTGGTCCGCCGGCCCCACCCTCGCCGTCCAG
CTCGGCGACATCCTCGACCGCGGCGGCGACGAGATACGCCTCCTCTACCTCATCCGCCGC
CTCGCCATCTCCGCCGCCGGCCAGGGCGGCGCGCTCCTCCCCATCATGGGGAACCACGAG
GTCATGAACGTCTCCGGCGACTTCCGCTTCGCCACGCCCCAGGGCCTCCGGGAGTTCTCC
GCCTGGGCGGGCTGGTACCGCGCCGGCCTCGCCATCAAGCGCCGCTGCGCCCGCGGCGGC
GATGGCGGCGACCCGCCCCCCAAGAACCCGTTCCTGGGAATCCCCAAGGAGTTCCCCGGC
GTCAAGCCGGAGTTCTGGGATGGCATCCGATCCCGCCTCGCCGCGCTCCTCCCCGACGGG
CCCATCGCGCGGCGGTTCCTCGCCGACCTCCCCACCGTGCTCGTCGTCGGCGACTCCGTG
TTCGTCCACGGCGGGCTCCTCGAGGCCAACGTCGAATACGGCCTCGAGCGGATCAATGCG
GAGGTCAGCGAGTGGATCCGCGGCGAGAGGGGCGCCAATGCCGTGGCGCCGGAGTTTGTG
CGCGGCCGCGACGCCGTGGTCTGGCTCAGGAGGTTCTCCGACGGCGTCAATTGCGATTGC
CAGCGGCTCGAGGGGGTTCTCGGGATGATCCCGGGCGCCAAGAGGATGATAATGGGGCAC
ACGATTCAGACCGAGGGGATCAATGCGGTGTGCGGTGCGCAGGCGGTGAGGGTGGATGTG
GGATTGTCTAGAGGATGCGGTAATGGGCTGCCAGAGGTGCTCGAGATCAATGGTGGCGGC
ACCAATGTGAGGGTGATCACGACGGATCCCGCGGAGGCCTGGCAGTACCGGAAGCAGGGG
GCGGAGAAGGCCGCCATCGCTACCGCGGTGAAGGAGAAGAAGGGGGAGGTAAAGGAAGGG
CTTGCATTGTTGGTAAGGGAGAGCCATGGGTTGAAAGAGGTACAAGCTAAGGCGGCTTAA

Peptide Sequence

PEP ID

Os11t0261900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:8826309:8827815:1 gene:Os11g0261900 transcript:Os11t0261900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os11t0261900-01)
Sequence

MATAAAADVPSCRDLPAAVSAFADAFVDFAVSGIFFPSTPTPSPPPPPTPTTFLPSPTRL
VAIGDLHGDLPKSLSALRLAGLVPPHDPTSWSAGPTLAVQLGDILDRGGDEIRLLYLIRR
LAISAAGQGGALLPIMGNHEVMNVSGDFRFATPQGLREFSAWAGWYRAGLAIKRRCARGG
DGGDPPPKNPFLGIPKEFPGVKPEFWDGIRSRLAALLPDGPIARRFLADLPTVLVVGDSV
FVHGGLLEANVEYGLERINAEVSEWIRGERGANAVAPEFVRGRDAVVWLRRFSDGVNCDC
QRLEGVLGMIPGAKRMIMGHTIQTEGINAVCGAQAVRVDVGLSRGCGNGLPEVLEINGGG
TNVRVITTDPAEAWQYRKQGAEKAAIATAVKEKKGEVKEGLALLVRESHGLKEVQAKAA

Transcript Sequence

Transcript ID

Os11t0261900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:8826309:8827815:1 gene:Os11g0261900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallophosphoesterase domain containing protein. (Os11t0261900-01)
Sequence

GCACACCAAATCCTCCCTTTTTGCCAAACAAACCCGTCTCCGTCTGACCCCCAATATGGC
CACCGCCGCCGCCGCCGATGTCCCCTCCTGCCGCGACCTCCCCGCCGCCGTCTCCGCCTT
CGCCGACGCCTTCGTCGACTTCGCTGTCTCCGGCATCTTCTTCCCCTCCACCCCAACCCC
CTCACCCCCTCCTCCCCCTACGCCAACCACCTTCCTCCCTTCCCCCACCCGCCTCGTCGC
CATCGGCGACCTCCACGGCGACCTCCCCAAGTCCCTCTCCGCCCTCCGCCTCGCCGGCCT
CGTCCCTCCCCACGACCCCACCTCCTGGTCCGCCGGCCCCACCCTCGCCGTCCAGCTCGG
CGACATCCTCGACCGCGGCGGCGACGAGATACGCCTCCTCTACCTCATCCGCCGCCTCGC
CATCTCCGCCGCCGGCCAGGGCGGCGCGCTCCTCCCCATCATGGGGAACCACGAGGTCAT
GAACGTCTCCGGCGACTTCCGCTTCGCCACGCCCCAGGGCCTCCGGGAGTTCTCCGCCTG
GGCGGGCTGGTACCGCGCCGGCCTCGCCATCAAGCGCCGCTGCGCCCGCGGCGGCGATGG
CGGCGACCCGCCCCCCAAGAACCCGTTCCTGGGAATCCCCAAGGAGTTCCCCGGCGTCAA
GCCGGAGTTCTGGGATGGCATCCGATCCCGCCTCGCCGCGCTCCTCCCCGACGGGCCCAT
CGCGCGGCGGTTCCTCGCCGACCTCCCCACCGTGCTCGTCGTCGGCGACTCCGTGTTCGT
CCACGGCGGGCTCCTCGAGGCCAACGTCGAATACGGCCTCGAGCGGATCAATGCGGAGGT
CAGCGAGTGGATCCGCGGCGAGAGGGGCGCCAATGCCGTGGCGCCGGAGTTTGTGCGCGG
CCGCGACGCCGTGGTCTGGCTCAGGAGGTTCTCCGACGGCGTCAATTGCGATTGCCAGCG
GCTCGAGGGGGTTCTCGGGATGATCCCGGGCGCCAAGAGGATGATAATGGGGCACACGAT
TCAGACCGAGGGGATCAATGCGGTGTGCGGTGCGCAGGCGGTGAGGGTGGATGTGGGATT
GTCTAGAGGATGCGGTAATGGGCTGCCAGAGGTGCTCGAGATCAATGGTGGCGGCACCAA
TGTGAGGGTGATCACGACGGATCCCGCGGAGGCCTGGCAGTACCGGAAGCAGGGGGCGGA
GAAGGCCGCCATCGCTACCGCGGTGAAGGAGAAGAAGGGGGAGGTAAAGGAAGGGCTTGC
ATTGTTGGTAAGGGAGAGCCATGGGTTGAAAGAGGTACAAGCTAAGGCGGCTTAATTAGT
TCAGTGTGGTAACTTCAGGGTAGGTAACATTTTGGTGACTCAATTGGGATTGCACGGTAA
ATTGGGTAACAAGGATAGAAAGGATGATATGTTGAAACTGTTTGTGGATTCAATAATGGA
AAGAAACCATTATCATCATTATTTATCGAGATGTGCTAATCAATTGCTGATATGTGCAAA
TTGTGAG