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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0256200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:8443220:8446079:-1 gene:Os11g0256200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF842, eukaryotic family protein. (Os11t0256200-01)
Sequence

ATGGACCAGGCGGGGTCGATGGAGGAGCGGGTCATCACCGAGCGGATCCGGCGGAAGCTG
GAGGAGGTGAACGCCGCCGCGCAGAAGCACCTCGCCGGCGTCCAGGACCACGTCAACTTC
ACCATGCAGCAAGCGTACTTCAAGTGTGCGTATGAATGCTTTGATCGCCGAAGAAGTCAA
GAAGGGATCAACAATTGTGTTGAGAACTGCAGCGTGCCTGTCCTTACTGCCAACAATGTT
GTTGAGACTGAGATGGCTAAATTCCAGGAGCGGCTGAATCGATCTTTGATGGTGTGCCAA
GATAAATTTGAAGCAGCAAAGCTCCAGAAGATGAAAACACATGCGACTGAGGAGCTAGAA
GCATGCGTAAACAGATCTATTGATGACAGTATCAGGGTCCTGCCCCATCTGGTTGATCAG
ATCAAGTCCACCCTCTCCATGAATTAG

Peptide Sequence

PEP ID

Os11t0256200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:8443220:8446079:-1 gene:Os11g0256200 transcript:Os11t0256200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF842, eukaryotic family protein. (Os11t0256200-01)
Sequence

MDQAGSMEERVITERIRRKLEEVNAAAQKHLAGVQDHVNFTMQQAYFKCAYECFDRRRSQ
EGINNCVENCSVPVLTANNVVETEMAKFQERLNRSLMVCQDKFEAAKLQKMKTHATEELE
ACVNRSIDDSIRVLPHLVDQIKSTLSMN

Transcript Sequence

Transcript ID

Os11t0256200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:8443220:8446079:-1 gene:Os11g0256200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF842, eukaryotic family protein. (Os11t0256200-01)
Sequence

CTTGCTCTCTCGCCCTCTTCACCAAGAAAGAAAACAGGCGCACGCCTCGCCTCGCCTCGC
CGCCGGCGGCCACCGTCTCCGCCGCCTCCTGCCCCCAACCCAGGAACCCCCGGCGAGAGA
GCTCGATGGACCAGGCGGGGTCGATGGAGGAGCGGGTCATCACCGAGCGGATCCGGCGGA
AGCTGGAGGAGGTGAACGCCGCCGCGCAGAAGCACCTCGCCGGCGTCCAGGACCACGTCA
ACTTCACCATGCAGCAAGCGTACTTCAAGTGTGCGTATGAATGCTTTGATCGCCGAAGAA
GTCAAGAAGGGATCAACAATTGTGTTGAGAACTGCAGCGTGCCTGTCCTTACTGCCAACA
ATGTTGTTGAGACTGAGATGGCTAAATTCCAGGAGCGGCTGAATCGATCTTTGATGGTGT
GCCAAGATAAATTTGAAGCAGCAAAGCTCCAGAAGATGAAAACACATGCGACTGAGGAGC
TAGAAGCATGCGTAAACAGATCTATTGATGACAGTATCAGGGTCCTGCCCCATCTGGTTG
ATCAGATCAAGTCCACCCTCTCCATGAATTAGAGAGATCAGAAGAAGTTCAGAACTAAAC
AGTAGAATCTTCCTCGTAAACTATTTCAGCTTTTACAAAAAGCATTTTCACTAATTTTGG
CACCAAGATCGTTGGCCAAATTACTGCCCTTTGTTAACATGAGTATGACATATGAGCGGC
ATATCGTATTTTGTGTGCCTTGAGCATTTTGTTCGGAACCACACTTTGTTGCAGAGCTGA
TTTATCGAAAGATGGTGCAATAATAGAAGATGATATCCTCATGTTGCTCATC