Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0255500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:8387770:8389759:-1 gene:Os11g0255500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Allyl alcohol dehydrogenase; NADP-dependent oxidoreductase-like protein. (Os11t0255500-01)
Sequence

ATGGATGGAGGAGGCGTCGATGGCTATGAGATGGAGATGGTGAGGAACAGGAAGGTGGTG
CTAAGGAGGTACGTGACGGCTGGGTACCCTACAGTAGATGATATGGAGGTGGTATCCTCC
ACCATGATGCCACGCGTGCCTCTTGGAACAATGGCACCAGCGGTGATGGTGAAGAACATC
TACCTTTCATGCGACCCGTGGATGCGCGGTCGTATGACTAAGCACGACGATGCTACCGCG
GAGATAGCCGAAGACTTCGTGTTAGGAGAGGCCATGGTTAATTTCGGTGTGAGCAAGGTG
GTCGACTCAACGCACCCGGTGTTCGCTGCTGGCGACCTCGTGTGGGGACTGTGTGGTTGG
GAGGAGTACAGCCTCATCACCCAACCGGAGACACTGCACAAGATCAACCATCCTGATCTA
CCACTCTCCTACTACACCGGTGTTCTCGGTGTGACTGGTCTAACAGCATATGCCGCATTC
TTTGAGGTCGGCAAGCCCAAGAAAGGAGAGACCGTCTTTGTGTCGGCGGCATCTGGTGCT
GTCGGCCAGATTGTTGGGCAGCTTGCAAAGATTGCCGGCTGCTATGTGGTTGGAAGCGCT
GGCTCCGACGAGAAGGTCACCCTTCTCAAGACCAAGTTTGGCTTTCACGATGCATTCAAC
TACAAGAAAGAGAGCAATGATCTTACCGGTGCTCTCCGGCGGTGCTTCCCAGATGGAATA
GACATCTACTTTGACAATGTCGGCGGTGCGACGCTGGATGCGGCGCTGGTCAACATGCGG
CGTGGTGGTCGAGTGGTGGTGTGTGGGATGATTTCACAGTACAACCTGCAGGAGCCCGAG
GGGGTGCACAACGTGATACAGATCCTATCCAAGACCATCCGGGTGGAGGGATTTGCCGTA
TTCAACCACTTCGGCTTATACCCGATGTTTGAGGATGAGATGGCTAGGTACCTAAAGGAA
GGTAAGGTGACCGTCCTGCAGGATGTTGTCAAGGGCATCGAGAAGGCATCGGAGGCTCTC
ATTGGTATGTTTTCTGGGAGGAATGTGGGCAAGTTGTTGGTTGCTGTTGCAGATGAATGA

Peptide Sequence

PEP ID

Os11t0255500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:8387770:8389759:-1 gene:Os11g0255500 transcript:Os11t0255500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Allyl alcohol dehydrogenase; NADP-dependent oxidoreductase-like protein. (Os11t0255500-01)
Sequence

MDGGGVDGYEMEMVRNRKVVLRRYVTAGYPTVDDMEVVSSTMMPRVPLGTMAPAVMVKNI
YLSCDPWMRGRMTKHDDATAEIAEDFVLGEAMVNFGVSKVVDSTHPVFAAGDLVWGLCGW
EEYSLITQPETLHKINHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVSAASGA
VGQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKFGFHDAFNYKKESNDLTGALRRCFPDGI
DIYFDNVGGATLDAALVNMRRGGRVVVCGMISQYNLQEPEGVHNVIQILSKTIRVEGFAV
FNHFGLYPMFEDEMARYLKEGKVTVLQDVVKGIEKASEALIGMFSGRNVGKLLVAVADE

Transcript Sequence

Transcript ID

Os11t0255500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:8387770:8389759:-1 gene:Os11g0255500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Allyl alcohol dehydrogenase; NADP-dependent oxidoreductase-like protein. (Os11t0255500-01)
Sequence

ACTCCCCCAGCTTGAACTTAGAGGTGGGTTGCTTAGCCTGGTTTTACAAGAATCTAAACC
AGCAATGGATGGAGGAGGCGTCGATGGCTATGAGATGGAGATGGTGAGGAACAGGAAGGT
GGTGCTAAGGAGGTACGTGACGGCTGGGTACCCTACAGTAGATGATATGGAGGTGGTATC
CTCCACCATGATGCCACGCGTGCCTCTTGGAACAATGGCACCAGCGGTGATGGTGAAGAA
CATCTACCTTTCATGCGACCCGTGGATGCGCGGTCGTATGACTAAGCACGACGATGCTAC
CGCGGAGATAGCCGAAGACTTCGTGTTAGGAGAGGCCATGGTTAATTTCGGTGTGAGCAA
GGTGGTCGACTCAACGCACCCGGTGTTCGCTGCTGGCGACCTCGTGTGGGGACTGTGTGG
TTGGGAGGAGTACAGCCTCATCACCCAACCGGAGACACTGCACAAGATCAACCATCCTGA
TCTACCACTCTCCTACTACACCGGTGTTCTCGGTGTGACTGGTCTAACAGCATATGCCGC
ATTCTTTGAGGTCGGCAAGCCCAAGAAAGGAGAGACCGTCTTTGTGTCGGCGGCATCTGG
TGCTGTCGGCCAGATTGTTGGGCAGCTTGCAAAGATTGCCGGCTGCTATGTGGTTGGAAG
CGCTGGCTCCGACGAGAAGGTCACCCTTCTCAAGACCAAGTTTGGCTTTCACGATGCATT
CAACTACAAGAAAGAGAGCAATGATCTTACCGGTGCTCTCCGGCGGTGCTTCCCAGATGG
AATAGACATCTACTTTGACAATGTCGGCGGTGCGACGCTGGATGCGGCGCTGGTCAACAT
GCGGCGTGGTGGTCGAGTGGTGGTGTGTGGGATGATTTCACAGTACAACCTGCAGGAGCC
CGAGGGGGTGCACAACGTGATACAGATCCTATCCAAGACCATCCGGGTGGAGGGATTTGC
CGTATTCAACCACTTCGGCTTATACCCGATGTTTGAGGATGAGATGGCTAGGTACCTAAA
GGAAGGTAAGGTGACCGTCCTGCAGGATGTTGTCAAGGGCATCGAGAAGGCATCGGAGGC
TCTCATTGGTATGTTTTCTGGGAGGAATGTGGGCAAGTTGTTGGTTGCTGTTGCAGATGA
ATGACTCTAGTTAATTAATAATAGGCAGTTATAGTACTGTTATAGAATAAGATGCAGGAC
AATATTTCCAATTCAGTTCATATATAGCAAATGTTGTAAACCCACTTTATACTCATAATC
TTATATATATCACAGTGC