Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0253100-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:8243782:8248342:-1 gene:Os11g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os11t0253100-00)
Sequence	ATGGGAGCAAGAACTAATGGCACTCTCCCACGAACTAATGGCAGTACTCTCCCACAAGAA CCACAGACCAACATGAGTCATGACATTGGTCTATCTGAAGAATCAGGGAGCGAAACTGAA GAATATGACAGTGACACTAGCCTATCAGAGAAAGCAGAAGAGAGGATCGACAGACGGCTC CTATTAGCAGCCAGATCCGGTGATTGCACGGCAATGAGGGACATGGCTGCGAGTGATCCA GACGTGCTGCTCCGAACGACTAACCATGGCAGCAACTGCCTGCACATATCTTCCATCCAT GGTCACCTAGAATTTTGCAACGATGTGGTCAGGCTCAAGCAGCCTCTCCTCGCCGCCGTC AACTCATACGGGGAGACGCCACTGCTCGCCGCCGTGGCAGCTGGGCATGCTGCTCTGGCT TCTGAACTGCTTAGACACTGCCGTGAATTGGGCTTCCGCGATGCAGTTCTGAAGCAGGAC AGCGTCGGATGCAATGCACTGCACCATGCCATTCGCGGCGGCCACGATGACCTTGCGCTG GAGCTGATAGCTGCAGAGCCGGCACTGTCACGAGCCGTGAACAAGAACAACGAGTCGCCC ATGTTCATCGCTGCGATGAGAAACTCCGCCGACATATTCGACAGGTTGCTGGCTATCCCG TATTCCTCTCATTCTGGGTGTGCAGGTGATCATGCTCTGCATGCTGCTGCGAGAAATGGG AATTCAGATATTGCTAAAAGGGTTATGGAGACGCGTCCATGGCTGGCCAAACTGCCAAAC AGATACGGGTCAACTCCCATGCACCATGCGCTGCTTAGTGACCGTGTTGGCGTGCTACGA GTGTTGCTGGAACATGATTCTTCTTTAGGATACGTCGTAGCAGGCACAGAAGACGTTCCC CTCCTTGTTTCTGCCGCATTCCAAGGTCGTATCGGCATTGCTCGAGAGATTCTAAGCTAT TGTCCAGATGCTCCCTTTCGCAGTAAGAATGGTTGGACATGCCTGAGTGCCGCTGTGCAC GCAGACCGGCTTGAATTTGTCGAATTCGTCTTGGGGACACCAGAACTACAGAAACTGGTT AGCATGCGAGACAATCAAGGGAGAACTGCTCTGCATTATGCTGTCATGAAGTGTAATCCA AAAATAGTTGCCGCTTTGTTGTCGCATGGAGGCGCTGATGTCACGATGCTTGATAACTCC AGTAGTCCACCAAGCTGGAAATTATGGGGACTCGGGGATCACACTAAGACTTTGAACTGG AATGAAGTGGCCATGCTTATGATGGAAGCTGATCCCCGAAATGCAACCTCTCTGCATTAC CTTGCTATGGACGCAAAGATAAAAGTAACTAATGATTCGAGGACGAAAGCAATGTTTCCA ACTCTGACAAACACAAGGAGCACTTCATTAGTGGCTATCATCATAGCGGCAATTACATTC GTCGCTGCTTTCACCTTACCTGGAGGATACAATACTGATGTTGGAAGCAGACACCCCATT ATGGCAAAAAAGTTTTCACTTCAGGCTTTCTTGATCTCAGATACCTTAGCAATGTGTTCC TCATTTGTTGTCGCATTCATATGCATCATAGCAAAGTGGGAGGATCTTCGGTTCTTGCTT TATTACAGGTCTATTACTATGAAGCTAATGTGGTTTTCATACATGGCAACCATTATAGCA TTTGCAACTGGTTTGTACACAGTTTTACCTTCTCATCTTCAATGGTTGGCTATAGCGATT TGTTTTGTGCCAGCTTTACTGCCCATCCTTACCAAGCTGCTAGGTGATTGGCCTATCTTG AAGCTCAAATTTCGGCTAGGTAAAATCTATAAGTCAGGCTTCATTGACATGGTGTGA

Peptide Sequence

PEP ID	Os11t0253100-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:8243782:8248342:-1 gene:Os11g0253100 transcript:Os11t0253100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os11t0253100-00)
Sequence	MGARTNGTLPRTNGSTLPQEPQTNMSHDIGLSEESGSETEEYDSDTSLSEKAEERIDRRL LLAARSGDCTAMRDMAASDPDVLLRTTNHGSNCLHISSIHGHLEFCNDVVRLKQPLLAAV NSYGETPLLAAVAAGHAALASELLRHCRELGFRDAVLKQDSVGCNALHHAIRGGHDDLAL ELIAAEPALSRAVNKNNESPMFIAAMRNSADIFDRLLAIPYSSHSGCAGDHALHAAARNG NSDIAKRVMETRPWLAKLPNRYGSTPMHHALLSDRVGVLRVLLEHDSSLGYVVAGTEDVP LLVSAAFQGRIGIAREILSYCPDAPFRSKNGWTCLSAAVHADRLEFVEFVLGTPELQKLV SMRDNQGRTALHYAVMKCNPKIVAALLSHGGADVTMLDNSSSPPSWKLWGLGDHTKTLNW NEVAMLMMEADPRNATSLHYLAMDAKIKVTNDSRTKAMFPTLTNTRSTSLVAIIIAAITF VAAFTLPGGYNTDVGSRHPIMAKKFSLQAFLISDTLAMCSSFVVAFICIIAKWEDLRFLL YYRSITMKLMWFSYMATIIAFATGLYTVLPSHLQWLAIAICFVPALLPILTKLLGDWPIL KLKFRLGKIYKSGFIDMV

Transcript Sequence

Transcript ID	Os11t0253100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:8243782:8248342:-1 gene:Os11g0253100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os11t0253100-00)
Sequence	ATGGGAGCAAGAACTAATGGCACTCTCCCACGAACTAATGGCAGTACTCTCCCACAAGAA CCACAGACCAACATGAGTCATGACATTGGTCTATCTGAAGAATCAGGGAGCGAAACTGAA GAATATGACAGTGACACTAGCCTATCAGAGAAAGCAGAAGAGAGGATCGACAGACGGCTC CTATTAGCAGCCAGATCCGGTGATTGCACGGCAATGAGGGACATGGCTGCGAGTGATCCA GACGTGCTGCTCCGAACGACTAACCATGGCAGCAACTGCCTGCACATATCTTCCATCCAT GGTCACCTAGAATTTTGCAACGATGTGGTCAGGCTCAAGCAGCCTCTCCTCGCCGCCGTC AACTCATACGGGGAGACGCCACTGCTCGCCGCCGTGGCAGCTGGGCATGCTGCTCTGGCT TCTGAACTGCTTAGACACTGCCGTGAATTGGGCTTCCGCGATGCAGTTCTGAAGCAGGAC AGCGTCGGATGCAATGCACTGCACCATGCCATTCGCGGCGGCCACGATGACCTTGCGCTG GAGCTGATAGCTGCAGAGCCGGCACTGTCACGAGCCGTGAACAAGAACAACGAGTCGCCC ATGTTCATCGCTGCGATGAGAAACTCCGCCGACATATTCGACAGGTTGCTGGCTATCCCG TATTCCTCTCATTCTGGGTGTGCAGGTGATCATGCTCTGCATGCTGCTGCGAGAAATGGG AATTCAGATATTGCTAAAAGGGTTATGGAGACGCGTCCATGGCTGGCCAAACTGCCAAAC AGATACGGGTCAACTCCCATGCACCATGCGCTGCTTAGTGACCGTGTTGGCGTGCTACGA GTGTTGCTGGAACATGATTCTTCTTTAGGATACGTCGTAGCAGGCACAGAAGACGTTCCC CTCCTTGTTTCTGCCGCATTCCAAGGTCGTATCGGCATTGCTCGAGAGATTCTAAGCTAT TGTCCAGATGCTCCCTTTCGCAGTAAGAATGGTTGGACATGCCTGAGTGCCGCTGTGCAC GCAGACCGGCTTGAATTTGTCGAATTCGTCTTGGGGACACCAGAACTACAGAAACTGGTT AGCATGCGAGACAATCAAGGGAGAACTGCTCTGCATTATGCTGTCATGAAGTGTAATCCA AAAATAGTTGCCGCTTTGTTGTCGCATGGAGGCGCTGATGTCACGATGCTTGATAACTCC AGTAGTCCACCAAGCTGGAAATTATGGGGACTCGGGGATCACACTAAGACTTTGAACTGG AATGAAGTGGCCATGCTTATGATGGAAGCTGATCCCCGAAATGCAACCTCTCTGCATTAC CTTGCTATGGACGCAAAGATAAAAGTAACTAATGATTCGAGGACGAAAGCAATGTTTCCA ACTCTGACAAACACAAGGAGCACTTCATTAGTGGCTATCATCATAGCGGCAATTACATTC GTCGCTGCTTTCACCTTACCTGGAGGATACAATACTGATGTTGGAAGCAGACACCCCATT ATGGCAAAAAAGTTTTCACTTCAGGCTTTCTTGATCTCAGATACCTTAGCAATGTGTTCC TCATTTGTTGTCGCATTCATATGCATCATAGCAAAGTGGGAGGATCTTCGGTTCTTGCTT TATTACAGGTCTATTACTATGAAGCTAATGTGGTTTTCATACATGGCAACCATTATAGCA TTTGCAACTGGTTTGTACACAGTTTTACCTTCTCATCTTCAATGGTTGGCTATAGCGATT TGTTTTGTGCCAGCTTTACTGCCCATCCTTACCAAGCTGCTAGGTGATTGGCCTATCTTG AAGCTCAAATTTCGGCTAGGTAAAATCTATAAGTCAGGCTTCATTGACATGGTGTGA