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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0244200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:7750382:7751125:-1 gene:Os11g0244200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP21.9 description:Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9) (Fragment). (Os11t0244200-01)
Sequence

ATGGCGGCGGTGGCGGAACGGGAGGTTCTTGGAATGGTTGCAGCGGTGGCGGCCATGGTG
GTGATGATGGCGCCGCCGGCCGCCGCGCTGGTGCCGTACGGCTACGGCTACATGCTCGAC
GACCCGTTCCGGGTTCTGGAGCAGTCGCCGCTGAGGCCGGCGGGAGGTGTCGCCGCCGCC
GCCGCCGCCGGCGAGCCGGCGGCCGTGGCGCTGGCGAGGTGCGACTGGAAGGAGACGCCG
GAGGCGCACGTGGTGACGGTGGACGTGCCCGGGGTGCGGCGCGGCGACGTGCGCGTGGAG
GTGGACGAGGCCAGCCGCGTGCTCCGGGTGTCCGGCGAGCGGCGTCGCGCCGGCGCCGCC
GAGGAGGAGGAGGGGGAGCGCGACGGCGTGCGGTGGCACCGCGCCGAGCGCGCGGCGGGG
AGGTTCTGGAGGCGGTTCAGGATGCCGCCCGGCGCCGACGTGGGGCGCGTCGCGGCGAGG
CTCGACGACGGCGTGCTCACCGTCACCGTGCCCAAGGTGCCCGGCCACCGCGGGCGGGAG
CCGCGCGTCGTCGCCATCGACGGCGCCGGCGCCGGCGACATGGAGGCGGAGGTGGTGAAG
GCGTCCAAGGCCGAGATGTGA

Peptide Sequence

PEP ID

Os11t0244200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:7750382:7751125:-1 gene:Os11g0244200 transcript:Os11t0244200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP21.9 description:Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9) (Fragment). (Os11t0244200-01)
Sequence

MAAVAEREVLGMVAAVAAMVVMMAPPAAALVPYGYGYMLDDPFRVLEQSPLRPAGGVAAA
AAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAA
EEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGRE
PRVVAIDGAGAGDMEAEVVKASKAEM

Transcript Sequence

Transcript ID

Os11t0244200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:7750382:7751125:-1 gene:Os11g0244200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP21.9 description:Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9) (Fragment). (Os11t0244200-01)
Sequence

AAGAAACAAGCAGAAACAGCAAAGACGTAGACATTGTTGGAGCCTAGACAGCAATGGCGG
CGGTGGCGGAACGGGAGGTTCTTGGAATGGTTGCAGCGGTGGCGGCCATGGTGGTGATGA
TGGCGCCGCCGGCCGCCGCGCTGGTGCCGTACGGCTACGGCTACATGCTCGACGACCCGT
TCCGGGTTCTGGAGCAGTCGCCGCTGAGGCCGGCGGGAGGTGTCGCCGCCGCCGCCGCCG
CCGGCGAGCCGGCGGCCGTGGCGCTGGCGAGGTGCGACTGGAAGGAGACGCCGGAGGCGC
ACGTGGTGACGGTGGACGTGCCCGGGGTGCGGCGCGGCGACGTGCGCGTGGAGGTGGACG
AGGCCAGCCGCGTGCTCCGGGTGTCCGGCGAGCGGCGTCGCGCCGGCGCCGCCGAGGAGG
AGGAGGGGGAGCGCGACGGCGTGCGGTGGCACCGCGCCGAGCGCGCGGCGGGGAGGTTCT
GGAGGCGGTTCAGGATGCCGCCCGGCGCCGACGTGGGGCGCGTCGCGGCGAGGCTCGACG
ACGGCGTGCTCACCGTCACCGTGCCCAAGGTGCCCGGCCACCGCGGGCGGGAGCCGCGCG
TCGTCGCCATCGACGGCGCCGGCGCCGGCGACATGGAGGCGGAGGTGGTGAAGGCGTCCA
AGGCCGAGATGTGAGCATGTCAGTGAATAGTGATCGGCGACACCTATGTGTAATACTATG
ATCATAATGAAGATTATTTTATGC