Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0242800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:7659701:7662180:1 gene:Os11g0242800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5 description:Similar to ASCAB9-A (ASCAB9-B) (Fragment). (Os11t0242800-01)
Sequence	ATGGCGGCGCTCGCCCCGTCCAAGATGCTCGGCACCCGGCTCAACTTCGCCGGCTCCTCC CGCTACGCCACCGCGGCACCGACCACCGGAGCGCAGAAGATCGTCTCCCTCTTCAGCAAG AAGCCCGCCCCGAAGCCCAAGCCCGCCGCCGTCACCTCCTCGAGCCCCGACATCGGCGAT GAGCTCGCCAAGTGGTACGGCCCTGACAGGAGGATCTTCTTGCCGGAGGGTCTCCTGGAC CGCTCAGAGGTGCCGGACTACCTCAACGGAGAGGTCCCCGGAGACTACGGCTACGACCCT TTTGGCCTCAGCAAGAAGCCAGAGGACTTCTCCAAGTACCAGGCCTATGAGCTGATCCAT GCCAGGTGGGCGATGCTCGGCGCCGCTGGGTTCATCATCCCCGAGGCCTGCAACAAGTTT GGCGCAAACTGCGGCCCCGAGGCCGTCTGGTTCAAGACCGGCGCCCTCCTCCTGGACGGC AACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTCATCGTCGCCGTCGCCGCC GAGGTCGTCCTCGTCGGCGGCGCCGAGTACTACCGGATCATCAACGGCCTGGATCTGGAG GACAAGCTCCACCCAGGTGGCCCATTCGACCCGCTGGGGCTGGCGAGCGACCCGGACCAG GCGGCGCTGCTGAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGCTG GGGTTCTTCATCCAGGCCTACGTCACCGGCGAGGGCCCCGTCGAGAACCTCTCCAAGCAC CTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAGAGGACG CCCAGCCTGTAA

Peptide Sequence

PEP ID	Os11t0242800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:7659701:7662180:1 gene:Os11g0242800 transcript:Os11t0242800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5 description:Similar to ASCAB9-A (ASCAB9-B) (Fragment). (Os11t0242800-01)
Sequence	MAALAPSKMLGTRLNFAGSSRYATAAPTTGAQKIVSLFSKKPAPKPKPAAVTSSSPDIGD ELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIH ARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIVAVAA EVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSML GFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL

Transcript Sequence

Transcript ID	Os11t0242800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:7659701:7662180:1 gene:Os11g0242800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5 description:Similar to ASCAB9-A (ASCAB9-B) (Fragment). (Os11t0242800-01)
Sequence	AAACGCCCACCACAGTCTCCCCCTTTCTGAACACAGCACCACCCCTTCTGCTGCATCTCC CACCTCCCTCTGAATTGTGGGCCTGAGGCGATGGCGGCGCTCGCCCCGTCCAAGATGCTC GGCACCCGGCTCAACTTCGCCGGCTCCTCCCGCTACGCCACCGCGGCACCGACCACCGGA GCGCAGAAGATCGTCTCCCTCTTCAGCAAGAAGCCCGCCCCGAAGCCCAAGCCCGCCGCC GTCACCTCCTCGAGCCCCGACATCGGCGATGAGCTCGCCAAGTGGTACGGCCCTGACAGG AGGATCTTCTTGCCGGAGGGTCTCCTGGACCGCTCAGAGGTGCCGGACTACCTCAACGGA GAGGTCCCCGGAGACTACGGCTACGACCCTTTTGGCCTCAGCAAGAAGCCAGAGGACTTC TCCAAGTACCAGGCCTATGAGCTGATCCATGCCAGGTGGGCGATGCTCGGCGCCGCTGGG TTCATCATCCCCGAGGCCTGCAACAAGTTTGGCGCAAACTGCGGCCCCGAGGCCGTCTGG TTCAAGACCGGCGCCCTCCTCCTGGACGGCAACACCCTCAACTACTTCGGCAACAGCATC CCCATCAACCTCATCGTCGCCGTCGCCGCCGAGGTCGTCCTCGTCGGCGGCGCCGAGTAC TACCGGATCATCAACGGCCTGGATCTGGAGGACAAGCTCCACCCAGGTGGCCCATTCGAC CCGCTGGGGCTGGCGAGCGACCCGGACCAGGCGGCGCTGCTGAAGGTGAAGGAGATCAAG AACGGGCGGCTGGCCATGTTCTCCATGCTGGGGTTCTTCATCCAGGCCTACGTCACCGGC GAGGGCCCCGTCGAGAACCTCTCCAAGCACCTCAGCGACCCCTTCGGCAACAACCTGCTC ACCGTCATCTCCGGCGCCGCCGAGAGGACGCCCAGCCTGTAAACATCTCGCCGCCGGCGA CGCTGGCTGGCCTCAAGTTAATTTTAATCTTACCCGGGAAGAAGAAGGGAGGAGTTTGAG AAGGGTGGAAGAATGTGTTAAATGTACGTGTAAATTATCGTCGAGTTGGGAGATGAATTT GAAAACCTGTTCATTCTGATCTTCTGATAGGAAGGACCAAGTGTTTGGATTTGTGGCTGA GAAATATTTGCTACCTGAGTAAATTGTCTCGAAGTGGTTTTCATC