Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0242100-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:7595368:7606762:1 gene:Os11g0242100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-01);Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-02)
Sequence	ATGGTAGAGAATGGTGTTCTGGAGCAACCAAAGGGGGTGTCTCGAAATAGGCCACGTGCT CAGTCGAATGATCATCCAGTTGATCCTGGATACCTCCCAGAGTTGACATGGGAACACAAG CTTAGCAATATTGGCTATGATTTGCCATCCTTCAGACTTACATGGAGAGAGACATTCCAG TTGGCTGGCCTTGGTCTTCGTCTTGGCCGACACATCCTTGAAGAAACATCAAAAGGACGT GCTGCTGTGATTGATCCCATGAAGAAGCGCATTGCAAAATCTGGTCAGGGTGTTCCACTT GGCGGCATTGGTTCAGGAAGTATTGGAAGGAGCTACAAAGGCGAGTTTCAACGCTGGCAA TTGTTCCCGGGAACTTGTGAAGAGAGACCTGTACTGGCAAATCAATTTTCTGCGTTCATT TCCCGCAAAGATGGTAGAAACTATTCCTCAGTGCTGCATCCTGGGAAACCAGATTTGCCA AAAGGAAGTAACATTTCAGGAATTGGATCCTGGGACTGGAATATGAGTGGACAAAACTCT ACGTACCACGCTCTTTACCCTAGGTCCTGGACGATATACAATGGAGAACCTGACCCAGAT GTCAACATAGTGTGTCGTCAGATTTCTCCAATTATTCCACATAATTATCAACAGAGCAGC TATCCAGTTTCTGTATTCACTTTCACAGTAACTAACTCAGGCAATACGGCTGCTGATGTA ACTTTGCTTTTTACATGGGCTAACTCTGTTGGTGGGAAATCTGAACTAACTGGATATCAC TCCAATTCCCCTATGATAGAAAAGGATGGTGTGCATGGCATTCTGTTACATCACAGAACA GCTAATGGACAACCACCAGTTACTTTTGCCATAGCTGCACAAGAGAAAGAAGATATTCAT ATCTCGGAATGCCCTTACTTTATAATATCTGGAAGTTCTGATGCATTTTCAGCAAAAGAC ATGTGGAATTATGTGAAAGAGAATGGATCTTTTGATAACCTTGATCTCACCAAAACATCG ATGTGCTCAAAACCTGGATTATCAATAGGGGCAGCTATTGCAGCTTCTGTTAAGCTGCCT CCCCAGACAACCCAGAATGTATCATTTGCACTTGCCTGGGCTTGTCCTGAAGTGAAATTC TCCAGTGGAAAAACCTACCATAGGCGTTATACGAAATTTCATGGCACGGATAATGATGCA GCAGCAAGCCTTGCTCATGATGCCATTCTAGAACATAATTCTTGGGAAAGGCAAATTGAG GAGTGGCAGAATCCTATTTTGCAAGATGAGAGGTTTCCTGACTGGTACCCGGTCACACTT TTCAATGAGTTATACTACCTTAATGCTGGAGGAACTATATGGACTGATGGATTGCCACCA ATTCAAAGCTTGACAGGTATTGGTGAAAAGAAGTTTTCTCTGGACATGCAAAATGGGGAC GCTGATGATGCCAATGGGATAATCCCACGGAATAATACTGCCAGCGACATCCTTAATCAA ATGGCATCAGTACTCGAGAGAATTCATGCATCTATGGAATCAAATTCTGCCATAGGAACA ACTTTACTTCAGGGTGAAGAGAATATTGGCCAATTCCTCTACCTTGAGGGCATTGAGTAT TATATGTGGAACACATATGATGTTCATTTCTATGCATCATTCTCTCTGATCATGCTGTTT CCAAAACTCCAGCTCAGCATTCAGAGAGATTTCGCTGCTGCTGTTTTGATGCATGATCCT GAAAAGCTCAGGATGTTACATGATGGAAAATGGGTTGCGAGAAAAGTTCTTGGTGCTGTT CCTCATGATCTTGGGCTATATGACCCCTGGTTCAAAGTTAATGCATATACGCTCTATAAC ACAGATCGATGGAAGGACTTGAACCCAAAGTTTGTTCTGCAAGTTTATAGAGATGTGGTT GCCACAGGTGACAAATCCTTTGCTCGTGCTGTTTGGCCATCTGTTTATATGGCAATGGCA TATATGGAGCAATTTGACAGGGATAAAGATGGGATGATTGAAAATGAGGACTTTCCAGAT CAGACTTATGATGTGTGGTCAATGGCTGGTATAAGTGCGTACTGTGGTGGACTTTGGGTG GCCGCTCTTCAAGCTGCGTCAGCCTTGGCACACGAAGTTGGTGACAAAGCGTCTGAAAAA CTTTTCTGGGACAAGTATGAGAAGGCTAAGTCTGTTTATGGCAAGTTGTGGAATGGTTCT TACTTCAATTATGATGATGGCGACAACATAATGAGTGCATCCATCCATGCGGATCAATTG GCTGGACAATGGTATGCCAAAGCTTGCGGTCTCTTCCCAATTGTTGACAAGGATAAGGCG GAAAGTGCACTAGAAAAGATATATTCTTTCAATGTGATGAAATTCAAGGATGGTAAAAGG GGAGCAATGAATGGGATGTGGCCAGATGGCACAGTGGACATGTCCGCAATGCAATCTCGG GAGATATGGCCAGGTGTGACATATGCACTTGCTGCAACCATGATTCAAGAAGGCATGGTT GAGAAGGGGTTCAAAACAGCTGAGGGGATTTATCATGCTGCCTGGTCTCCAGAAGGACTT GGGTACTCATTTCAAACCCCTGAAGCTTGGAACAATGACGATGAATACCGATCGTTGTGC TACATGCGCCCTCTTGCAATATGGGCCATACAGTGGGCACTATCAAACCCAAAACTCCAC AAGCAGACTGCAGATATCCCACAGGACTCTTTCCCAAAGAACCAGTTCTCGTATGCTCGG ATTGCGAAGTTGCTGCATTTACCTGAAGACGAATCGCCGAAGAGTTTCCTTCGAGTGATT TATGAGATTGTTCGTAACAGGTATAGGTCCTGA

Peptide Sequence

PEP ID	Os11t0242100-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:7595368:7606762:1 gene:Os11g0242100 transcript:Os11t0242100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-01);Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-02)
Sequence	MVENGVLEQPKGVSRNRPRAQSNDHPVDPGYLPELTWEHKLSNIGYDLPSFRLTWRETFQ LAGLGLRLGRHILEETSKGRAAVIDPMKKRIAKSGQGVPLGGIGSGSIGRSYKGEFQRWQ LFPGTCEERPVLANQFSAFISRKDGRNYSSVLHPGKPDLPKGSNISGIGSWDWNMSGQNS TYHALYPRSWTIYNGEPDPDVNIVCRQISPIIPHNYQQSSYPVSVFTFTVTNSGNTAADV TLLFTWANSVGGKSELTGYHSNSPMIEKDGVHGILLHHRTANGQPPVTFAIAAQEKEDIH ISECPYFIISGSSDAFSAKDMWNYVKENGSFDNLDLTKTSMCSKPGLSIGAAIAASVKLP PQTTQNVSFALAWACPEVKFSSGKTYHRRYTKFHGTDNDAAASLAHDAILEHNSWERQIE EWQNPILQDERFPDWYPVTLFNELYYLNAGGTIWTDGLPPIQSLTGIGEKKFSLDMQNGD ADDANGIIPRNNTASDILNQMASVLERIHASMESNSAIGTTLLQGEENIGQFLYLEGIEY YMWNTYDVHFYASFSLIMLFPKLQLSIQRDFAAAVLMHDPEKLRMLHDGKWVARKVLGAV PHDLGLYDPWFKVNAYTLYNTDRWKDLNPKFVLQVYRDVVATGDKSFARAVWPSVYMAMA YMEQFDRDKDGMIENEDFPDQTYDVWSMAGISAYCGGLWVAALQAASALAHEVGDKASEK LFWDKYEKAKSVYGKLWNGSYFNYDDGDNIMSASIHADQLAGQWYAKACGLFPIVDKDKA ESALEKIYSFNVMKFKDGKRGAMNGMWPDGTVDMSAMQSREIWPGVTYALAATMIQEGMV EKGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAIQWALSNPKLH KQTADIPQDSFPKNQFSYARIAKLLHLPEDESPKSFLRVIYEIVRNRYRS

Transcript Sequence

Transcript ID	Os11t0242100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:7595368:7606762:1 gene:Os11g0242100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-01);Beta-glucosidase, GBA2 type domain containing protein. (Os11t0242100-02)
Sequence	ACCACTATAATCTCCTCCACTCCCATTCCCTCCATCTCCCCCCCACGCTCGCGAGCTTCG CGGAGTCGGGAGATCGACCGCCGCCTCCCCCACCACACATCCGCCCGCGGCGGCGGGTTG CGCCTGCGCCGGCCTTCTCGGAGTCCCGCCTCTCCACTCCGGCTCACTCTCTCCGGGCTA GCCCAAAGGATTTAAAATGGTAGAGAATGGTGTTCTGGAGCAACCAAAGGGGGTGTCTCG AAATAGGCCACGTGCTCAGTCGAATGATCATCCAGTTGATCCTGGATACCTCCCAGAGTT GACATGGGAACACAAGCTTAGCAATATTGGCTATGATTTGCCATCCTTCAGACTTACATG GAGAGAGACATTCCAGTTGGCTGGCCTTGGTCTTCGTCTTGGCCGACACATCCTTGAAGA AACATCAAAAGGACGTGCTGCTGTGATTGATCCCATGAAGAAGCGCATTGCAAAATCTGG TCAGGGTGTTCCACTTGGCGGCATTGGTTCAGGAAGTATTGGAAGGAGCTACAAAGGCGA GTTTCAACGCTGGCAATTGTTCCCGGGAACTTGTGAAGAGAGACCTGTACTGGCAAATCA ATTTTCTGCGTTCATTTCCCGCAAAGATGGTAGAAACTATTCCTCAGTGCTGCATCCTGG GAAACCAGATTTGCCAAAAGGAAGTAACATTTCAGGAATTGGATCCTGGGACTGGAATAT GAGTGGACAAAACTCTACGTACCACGCTCTTTACCCTAGGTCCTGGACGATATACAATGG AGAACCTGACCCAGATGTCAACATAGTGTGTCGTCAGATTTCTCCAATTATTCCACATAA TTATCAACAGAGCAGCTATCCAGTTTCTGTATTCACTTTCACAGTAACTAACTCAGGCAA TACGGCTGCTGATGTAACTTTGCTTTTTACATGGGCTAACTCTGTTGGTGGGAAATCTGA ACTAACTGGATATCACTCCAATTCCCCTATGATAGAAAAGGATGGTGTGCATGGCATTCT GTTACATCACAGAACAGCTAATGGACAACCACCAGTTACTTTTGCCATAGCTGCACAAGA GAAAGAAGATATTCATATCTCGGAATGCCCTTACTTTATAATATCTGGAAGTTCTGATGC ATTTTCAGCAAAAGACATGTGGAATTATGTGAAAGAGAATGGATCTTTTGATAACCTTGA TCTCACCAAAACATCGATGTGCTCAAAACCTGGATTATCAATAGGGGCAGCTATTGCAGC TTCTGTTAAGCTGCCTCCCCAGACAACCCAGAATGTATCATTTGCACTTGCCTGGGCTTG TCCTGAAGTGAAATTCTCCAGTGGAAAAACCTACCATAGGCGTTATACGAAATTTCATGG CACGGATAATGATGCAGCAGCAAGCCTTGCTCATGATGCCATTCTAGAACATAATTCTTG GGAAAGGCAAATTGAGGAGTGGCAGAATCCTATTTTGCAAGATGAGAGGTTTCCTGACTG GTACCCGGTCACACTTTTCAATGAGTTATACTACCTTAATGCTGGAGGAACTATATGGAC TGATGGATTGCCACCAATTCAAAGCTTGACAGGTATTGGTGAAAAGAAGTTTTCTCTGGA CATGCAAAATGGGGACGCTGATGATGCCAATGGGATAATCCCACGGAATAATACTGCCAG CGACATCCTTAATCAAATGGCATCAGTACTCGAGAGAATTCATGCATCTATGGAATCAAA TTCTGCCATAGGAACAACTTTACTTCAGGGTGAAGAGAATATTGGCCAATTCCTCTACCT TGAGGGCATTGAGTATTATATGTGGAACACATATGATGTTCATTTCTATGCATCATTCTC TCTGATCATGCTGTTTCCAAAACTCCAGCTCAGCATTCAGAGAGATTTCGCTGCTGCTGT TTTGATGCATGATCCTGAAAAGCTCAGGATGTTACATGATGGAAAATGGGTTGCGAGAAA AGTTCTTGGTGCTGTTCCTCATGATCTTGGGCTATATGACCCCTGGTTCAAAGTTAATGC ATATACGCTCTATAACACAGATCGATGGAAGGACTTGAACCCAAAGTTTGTTCTGCAAGT TTATAGAGATGTGGTTGCCACAGGTGACAAATCCTTTGCTCGTGCTGTTTGGCCATCTGT TTATATGGCAATGGCATATATGGAGCAATTTGACAGGGATAAAGATGGGATGATTGAAAA TGAGGACTTTCCAGATCAGACTTATGATGTGTGGTCAATGGCTGGTATAAGTGCGTACTG TGGTGGACTTTGGGTGGCCGCTCTTCAAGCTGCGTCAGCCTTGGCACACGAAGTTGGTGA CAAAGCGTCTGAAAAACTTTTCTGGGACAAGTATGAGAAGGCTAAGTCTGTTTATGGCAA GTTGTGGAATGGTTCTTACTTCAATTATGATGATGGCGACAACATAATGAGTGCATCCAT CCATGCGGATCAATTGGCTGGACAATGGTATGCCAAAGCTTGCGGTCTCTTCCCAATTGT TGACAAGGATAAGGCGGAAAGTGCACTAGAAAAGATATATTCTTTCAATGTGATGAAATT CAAGGATGGTAAAAGGGGAGCAATGAATGGGATGTGGCCAGATGGCACAGTGGACATGTC CGCAATGCAATCTCGGGAGATATGGCCAGGTGTGACATATGCACTTGCTGCAACCATGAT TCAAGAAGGCATGGTTGAGAAGGGGTTCAAAACAGCTGAGGGGATTTATCATGCTGCCTG GTCTCCAGAAGGACTTGGGTACTCATTTCAAACCCCTGAAGCTTGGAACAATGACGATGA ATACCGATCGTTGTGCTACATGCGCCCTCTTGCAATATGGGCCATACAGTGGGCACTATC AAACCCAAAACTCCACAAGCAGACTGCAGATATCCCACAGGACTCTTTCCCAAAGAACCA GTTCTCGTATGCTCGGATTGCGAAGTTGCTGCATTTACCTGAAGACGAATCGCCGAAGAG TTTCCTTCGAGTGATTTATGAGATTGTTCGTAACAGGTATAGGTCCTGATGGAAGGGCAA ATATGCTCCTTATTGTTGGGTGTCCATTGGCCGTATTTTCATTGTTGGTTGAGAACATTT GTTGCTGTTGATCAGCACACTTGAGTATATAGTTTATGATAATAAAACTTTATTAATCGT GG