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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0241200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:7551980:7552671:-1 gene:Os11g0241200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0241200-01)
Sequence

ATGGCCAAGAAGCTCCTCGCCGCGGCCGCCGCCCTCCTCCTCCTCCTCGCCGCCGCCGCG
CAGGCGCTCGCGTCGTCGTCGTCGTCGCCGGGGAGCGCAAACCTCACGGCGACGCCGACG
GCGTACGAGATGGTGGAGCGGTACGGCTTCCCGCGCGGCATCCTCCCGGAGGGCGTGGAG
TCGTACGTGCTCCGCCCCGACGGCTCCTTCGAGGTGCGCCTCTCCGGCGACGGCAACGGC
GGCGGAGACTGCGAGTTCCGCGTGGGCGACGGCGGCGCGTACCTGCTCCGGTACGGGCGG
CGCGTGGCCGGGGTGGCGATGGAAGGCTCGATCCGGTCGCTGGAGGGGGTGAGCGTGAAG
GTGCTGTTCGCGTGGCTCGGCATCGGCCGCGTCGACCGCGCCGGCGACGACCTCCGGTTC
TTCGTCGGCCCTCTCTCCGCCGCCTTCCCGCTCGCCAACTTCGCCGACTGCCCGCGCTGC
CGCTGCGGCTTCGACTGCGACACCGCCGCCGCCGCCGACGTGATCGCCGCTTCTTGA

Peptide Sequence

PEP ID

Os11t0241200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:7551980:7552671:-1 gene:Os11g0241200 transcript:Os11t0241200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0241200-01)
Sequence

MAKKLLAAAAALLLLLAAAAQALASSSSSPGSANLTATPTAYEMVERYGFPRGILPEGVE
SYVLRPDGSFEVRLSGDGNGGGDCEFRVGDGGAYLLRYGRRVAGVAMEGSIRSLEGVSVK
VLFAWLGIGRVDRAGDDLRFFVGPLSAAFPLANFADCPRCRCGFDCDTAAAADVIAAS

Transcript Sequence

Transcript ID

Os11t0241200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:7551980:7552671:-1 gene:Os11g0241200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os11t0241200-01)
Sequence

AAGACAAACCCAGCAACAATGGCCAAGAAGCTCCTCGCCGCGGCCGCCGCCCTCCTCCTC
CTCCTCGCCGCCGCCGCGCAGGCGCTCGCGTCGTCGTCGTCGTCGCCGGGGAGCGCAAAC
CTCACGGCGACGCCGACGGCGTACGAGATGGTGGAGCGGTACGGCTTCCCGCGCGGCATC
CTCCCGGAGGGCGTGGAGTCGTACGTGCTCCGCCCCGACGGCTCCTTCGAGGTGCGCCTC
TCCGGCGACGGCAACGGCGGCGGAGACTGCGAGTTCCGCGTGGGCGACGGCGGCGCGTAC
CTGCTCCGGTACGGGCGGCGCGTGGCCGGGGTGGCGATGGAAGGCTCGATCCGGTCGCTG
GAGGGGGTGAGCGTGAAGGTGCTGTTCGCGTGGCTCGGCATCGGCCGCGTCGACCGCGCC
GGCGACGACCTCCGGTTCTTCGTCGGCCCTCTCTCCGCCGCCTTCCCGCTCGCCAACTTC
GCCGACTGCCCGCGCTGCCGCTGCGGCTTCGACTGCGACACCGCCGCCGCCGCCGACGTG
ATCGCCGCTTCTTGATCGAACGTGTTCTTGGCGTTCCTCGACGTGTGCTCAGCTGATGCA
AGCTCGAATGCTTCATGCCACTGAGAATCTGTACAAATTATGTGCTCTTTGATCCATTAA
TAATACAGATTGGGGAATGGATTTGATCGATC