Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0240600-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:7494025:7495335:-1 gene:Os11g0240600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0240600-01);Similar to gibberellin receptor GID1L2. (Os11t0240600-02)
Sequence

ACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGC
ACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCG
CGCAACGGCGTCGCGTCGCGCGACGTCGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGC
CTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTG
CCCGTCGTGGTGTTCTTCCACGGCGGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGCC
TACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGAC
TACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTC
CGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCA
CTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCAC
GTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTC
ATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTC
GGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCTGGCGCGCGTTCCTCCCGCCC
GGCGCCGACCGCACCCACGAGGCCGCGCACGCGGCCTCCCCCGCCGGCGCCGCCGGCATT
GACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGAC
TGGCAGCGCCGCTACTGCGAGACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGAC
TACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTC
ATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCACTGA

Peptide Sequence

PEP ID

Os11t0240600-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:7494025:7495335:-1 gene:Os11g0240600 transcript:Os11t0240600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0240600-01);Similar to gibberellin receptor GID1L2. (Os11t0240600-02)
Sequence

TRLSILAAGCLTDATCRADGTINRRLLNFLDPHVPPSAAPRNGVASRDVVVDPAIPLRAR
LFYPCPSGGDGGTGDATKPLPVVVFFHGGGFAYLSAASRAYDAACRRIARYAGAAVLSVD
YRRSPEHRYPTPYDDGLAALRFLDDPNNHPLAADDGDVPPLDVTRCFVAGDSAGANIAHH
VARRYALASTTFANLRLAGLIAIQPFFGGEERTPAELRLVGAPIVSVPRTDWLWRAFLPP
GADRTHEAAHAASPAGAAGIDSPAFPPATVVIGGYDPLQDWQRRYCETLRGKGKAVRVLD
YPDAIHAFYIFPEFAEARDLMLRIKDIVAGGGGEH

Transcript Sequence

Transcript ID

Os11t0240600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:7494025:7495335:-1 gene:Os11g0240600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0240600-01);Similar to gibberellin receptor GID1L2. (Os11t0240600-02)
Sequence

GACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGG
CACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCC
GCGCAACGGCGTCGCGTCGCGCGACGTCGTCGTCGACCCGGCGATCCCGCTCCGCGCCCG
CCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCT
GCCCGTCGTGGTGTTCTTCCACGGCGGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGC
CTACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGA
CTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCT
CCGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACC
ACTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCA
CGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCT
CATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGT
CGGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCTGGCGCGCGTTCCTCCCGCC
CGGCGCCGACCGCACCCACGAGGCCGCGCACGCGGCCTCCCCCGCCGGCGCCGCCGGCAT
TGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGA
CTGGCAGCGCCGCTACTGCGAGACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGA
CTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCT
CATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCACTGACTGGTCGGCGT
CGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTGGTGAGTGAGTGA
TTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATG
CCACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTG
GGACTTGTGTTGGTCGCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTT
GTTAGGAGTAAAAAGTAGAGGCCACCAATAAAATGGGATTTATGGTTTTAG