Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0239500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:7437775:7439149:-1 gene:Os11g0239500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0239500-01)
Sequence

ATGTCGTCGGACGACACGACGCCGACGCCGCTGGGGCGGAGGACGAAGCCGAAGCCGCCG
ATGTCCCGCCTGATGCGGCTGTCCCTCAAGGCCGTCGACTGGGCCACCGACGCCACGCGC
CGCGCCGACGGCACGCTCAACCGCCTCGCGCTGTCCGTCCTCGACCCGCGCGTCCCGGCC
TTCTCCTCCCCGTGCCGCGGCGTCGCCTCCCGCGACGTCCTCGTCCACCCGCCCACCCGC
CTCCGCGCGCGCCTCTTCTACCCCTCCGCCGCCGCCGGCAAGGACGAGCGGCCTCCTCCT
CCTCGCCCTCTCCCCGTCATCGTCTTCTTCCACGGCGGCGGGTTCGCGTTCCTCTCCGCG
GCGTCCGCGGCGTACGACGCCGCGTGCAGGCGTATCGCGCGGTACGCGTCCGCCGCGGTG
CTGTCCGTCGACTACCGCCGCGCGCCGGAGCACCGCTGCCCGGCGGCGTACGACGACGGG
ATCGCCGCGCTGCGCTACCTCGACGACCCCAAGAATCACCACGGCGGCGGCGGCGGAGGC
GTCCCGCCGCTCGACGCCGCCCGATGCTACCTCGGCGGCGACAGCGCGGGGGGGAACATC
GCGCACCACGTCGCCCGCCGCTACGCCTGCGACGCCGCCGCCTTCGAGAACGTCCGCGTC
GCCGGCCTCGTCGCCATCCAGCCCTTCTTCGGCGGCGAGGAGAGGACGGACTCGGAGCTC
CGCCTCGACGGCGCGCCCATCGTGACCGTCTCCCGCACCGACTGGATGTGGCGCGCGTTC
CTCCCCGACGGCTGCGACCGCACCCACGAGGCGGCCAACTTCGCCGCCCCGTCCGCCGCC
CCCGGCGTCGACTCCCCGGCGTTCCCGCCGGTGCTCCTCGCCATCGGCGGCTACGACCCG
CTCCAGGACTGGCAGAGGCGGTACGCCGAGATGCTGCGGGGCAAGGGCAAGGACGTGAGG
GTGTTCGAGTACCCCAACGCCATCCACGCCTTCTACGTCTTCCCGGCGTTCGACGACGGC
CGCGACCTCATGATACGCATCGCCGAGTTCGTCGCCGAGAGCGCCGCCGCCGCAGCCGCT
GCCAGCGGCGGTGGCAGCGAGTGA

Peptide Sequence

PEP ID

Os11t0239500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:7437775:7439149:-1 gene:Os11g0239500 transcript:Os11t0239500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0239500-01)
Sequence

MSSDDTTPTPLGRRTKPKPPMSRLMRLSLKAVDWATDATRRADGTLNRLALSVLDPRVPA
FSSPCRGVASRDVLVHPPTRLRARLFYPSAAAGKDERPPPPRPLPVIVFFHGGGFAFLSA
ASAAYDAACRRIARYASAAVLSVDYRRAPEHRCPAAYDDGIAALRYLDDPKNHHGGGGGG
VPPLDAARCYLGGDSAGGNIAHHVARRYACDAAAFENVRVAGLVAIQPFFGGEERTDSEL
RLDGAPIVTVSRTDWMWRAFLPDGCDRTHEAANFAAPSAAPGVDSPAFPPVLLAIGGYDP
LQDWQRRYAEMLRGKGKDVRVFEYPNAIHAFYVFPAFDDGRDLMIRIAEFVAESAAAAAA
ASGGGSE

Transcript Sequence

Transcript ID

Os11t0239500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:7437775:7439149:-1 gene:Os11g0239500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os11t0239500-01)
Sequence

GCGCCCGCGACACGTACGACGGCGACGGCAGCGGCGGCCATGTCGTCGGACGACACGACG
CCGACGCCGCTGGGGCGGAGGACGAAGCCGAAGCCGCCGATGTCCCGCCTGATGCGGCTG
TCCCTCAAGGCCGTCGACTGGGCCACCGACGCCACGCGCCGCGCCGACGGCACGCTCAAC
CGCCTCGCGCTGTCCGTCCTCGACCCGCGCGTCCCGGCCTTCTCCTCCCCGTGCCGCGGC
GTCGCCTCCCGCGACGTCCTCGTCCACCCGCCCACCCGCCTCCGCGCGCGCCTCTTCTAC
CCCTCCGCCGCCGCCGGCAAGGACGAGCGGCCTCCTCCTCCTCGCCCTCTCCCCGTCATC
GTCTTCTTCCACGGCGGCGGGTTCGCGTTCCTCTCCGCGGCGTCCGCGGCGTACGACGCC
GCGTGCAGGCGTATCGCGCGGTACGCGTCCGCCGCGGTGCTGTCCGTCGACTACCGCCGC
GCGCCGGAGCACCGCTGCCCGGCGGCGTACGACGACGGGATCGCCGCGCTGCGCTACCTC
GACGACCCCAAGAATCACCACGGCGGCGGCGGCGGAGGCGTCCCGCCGCTCGACGCCGCC
CGATGCTACCTCGGCGGCGACAGCGCGGGGGGGAACATCGCGCACCACGTCGCCCGCCGC
TACGCCTGCGACGCCGCCGCCTTCGAGAACGTCCGCGTCGCCGGCCTCGTCGCCATCCAG
CCCTTCTTCGGCGGCGAGGAGAGGACGGACTCGGAGCTCCGCCTCGACGGCGCGCCCATC
GTGACCGTCTCCCGCACCGACTGGATGTGGCGCGCGTTCCTCCCCGACGGCTGCGACCGC
ACCCACGAGGCGGCCAACTTCGCCGCCCCGTCCGCCGCCCCCGGCGTCGACTCCCCGGCG
TTCCCGCCGGTGCTCCTCGCCATCGGCGGCTACGACCCGCTCCAGGACTGGCAGAGGCGG
TACGCCGAGATGCTGCGGGGCAAGGGCAAGGACGTGAGGGTGTTCGAGTACCCCAACGCC
ATCCACGCCTTCTACGTCTTCCCGGCGTTCGACGACGGCCGCGACCTCATGATACGCATC
GCCGAGTTCGTCGCCGAGAGCGCCGCCGCCGCAGCCGCTGCCAGCGGCGGTGGCAGCGAG
TGACCGGGCCACGGAGCAGCAAGGTGTTCGTCCGCGTGTCAGCGTCGACGTGGCGTGCGT
GGCGGTGGCGCCGACTTGTTTGGCTGGGTTAGCGTGTGTCTATGATAAGCAGTGCAGTGT
ATAGTCTCTTGGTGATGTAATTTTTTCGAGGTTTAGGTGTGGTTTGCTTGAGTGATTAAG
TAAGAAATAGTTAAATTAATGTGGACGATAATTATATATTAGTATTACTTTTGCT