Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0237700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:7346265:7348818:-1 gene:Os11g0237700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to URF 4-related. (Os11t0237700-01)
Sequence	ATGGAGCTCGAGCTGCTATGCTCACCCATGGCGACCACCGCCGCGGCGACCATGGTGGCG GCGGCGGCCCACCACCCCCGCCCGCGCTTCCGCGTGCGCGCCGCCTGGGACATGAACCCG GGCGCCGCCACCGTCTCCGCGCCCAAGCCCAAGGCCAAGCCCCCGCCGCCGCCGTCGCCG CCGCCGCTGCCGACCGCCCCCGCCCCCACCCACGCCGACCTCTTCGCCCGCCGCAGCAAC AGCGAGGGCCAAGTGCCAAAGAAGACCACAAGTATGGGCTTTGAAAGGTGGTGGCTGCCG CCTCCGCCGGAGGTGAAGAAGCCCCGTTCGCTCTACAACGCCGCGTCCTTGGCGTACTTG GGGGACTGCATATATGAACTTTATGCTCGGAGACATTTCTTCTTTCCACCACTGAGCATC AATGACTACAACAAGCGTGTAATGGATGTCGTGAAATGTGAATCACAGGACCTTCTGCTG AACAAACTTCTCGGAGAAGATTTTCTAACTCAAGAAGAAAGGGACATACTTCGTTGGGGA AGAAATATCGTTAGCAGCAAGACACGTACCAGAAAACGTGCTGGAATTGCAGTTTACAAT CGAGCATCTTCACTTGAGACACTGATTGGATATCTTTACCTCACAAATTTCAAGCGTCTG GAGCAACTGATGTTTCAATTAGGGTTTACAAGTGGCGCTTCTTCACAACATATTGCAGAT GAGCTTCGCTCGAGTTTCCAGACAAAGAACTCGTCTAGATCTGTACAGTCTAAGCAAGAA GCAGCAAAATGA

Peptide Sequence

PEP ID	Os11t0237700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:7346265:7348818:-1 gene:Os11g0237700 transcript:Os11t0237700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to URF 4-related. (Os11t0237700-01)
Sequence	MELELLCSPMATTAAATMVAAAAHHPRPRFRVRAAWDMNPGAATVSAPKPKAKPPPPPSP PPLPTAPAPTHADLFARRSNSEGQVPKKTTSMGFERWWLPPPPEVKKPRSLYNAASLAYL GDCIYELYARRHFFFPPLSINDYNKRVMDVVKCESQDLLLNKLLGEDFLTQEERDILRWG RNIVSSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSQHIAD ELRSSFQTKNSSRSVQSKQEAAK

Transcript Sequence

Transcript ID	Os11t0237700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:7346265:7348818:-1 gene:Os11g0237700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to URF 4-related. (Os11t0237700-01)
Sequence	GTTTATCCGTTTTATTCGCGATGGAGCTCGAGCTGCTATGCTCACCCATGGCGACCACCG CCGCGGCGACCATGGTGGCGGCGGCGGCCCACCACCCCCGCCCGCGCTTCCGCGTGCGCG CCGCCTGGGACATGAACCCGGGCGCCGCCACCGTCTCCGCGCCCAAGCCCAAGGCCAAGC CCCCGCCGCCGCCGTCGCCGCCGCCGCTGCCGACCGCCCCCGCCCCCACCCACGCCGACC TCTTCGCCCGCCGCAGCAACAGCGAGGGCCAAGTGCCAAAGAAGACCACAAGTATGGGCT TTGAAAGGTGGTGGCTGCCGCCTCCGCCGGAGGTGAAGAAGCCCCGTTCGCTCTACAACG CCGCGTCCTTGGCGTACTTGGGGGACTGCATATATGAACTTTATGCTCGGAGACATTTCT TCTTTCCACCACTGAGCATCAATGACTACAACAAGCGTGTAATGGATGTCGTGAAATGTG AATCACAGGACCTTCTGCTGAACAAACTTCTCGGAGAAGATTTTCTAACTCAAGAAGAAA GGGACATACTTCGTTGGGGAAGAAATATCGTTAGCAGCAAGACACGTACCAGAAAACGTG CTGGAATTGCAGTTTACAATCGAGCATCTTCACTTGAGACACTGATTGGATATCTTTACC TCACAAATTTCAAGCGTCTGGAGCAACTGATGTTTCAATTAGGGTTTACAAGTGGCGCTT CTTCACAACATATTGCAGATGAGCTTCGCTCGAGTTTCCAGACAAAGAACTCGTCTAGAT CTGTACAGTCTAAGCAAGAAGCAGCAAAATGAATAGTTTAGAATGTAGTGACTGATACAA GCACATGTGAATTCTGGAACATGAGATCCAACGGTCACACACACAGTGAGTGATTCGCGA TTAATGTTTGGCTGTTTGTCAAAAAAAAGCTAGAGTGAATTGAACAATATATGATGTATG CATTACTGGAGGCGGCCGCAAGATAATGGCTCAACGTCAGTGAGCATTACTGTTTGGCTG TTTTGCTGTTTTGATCAGCCCATTTTGAGGTGCTAAAAAATGTGTTTCTACTCATTGAGG GTGATGTAGGCCATGGGTGTTATCAAGACCTTGTGTATTTGTTCAATTGTGTACTGCCCA TTGCTAACAGAGCTGTGCTTGCTATCAGATGTAACTTGTGCTATCCGCTTCATCCGTTCA GGACACTATCATACACTAGGGTGCATTGTCTTTTTGAATGACAACTCAAAATTTGTTGAA ATGCATC