Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0236100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:7255817:7258556:-1 gene:Os11g0236100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE 11 description:Similar to Sucrose-phosphate synthase. (Os11t0236100-01)
Sequence

GTGCTGAAGCTGATCGACCGGTACGACCTCTACGGCCAGGTCGCCTACCCCAAGCACCAC
AAGCAGACCGACGTGCCGCACATCTACCGCCTCGCCGCCAAGACCAAGGGTGTGTTCATC
AATCCTGCTCTTGTCGAGCCATTCGGCCTCACCATCATAGAGGCTGCTGCATATGGGTTG
CCGGTAGTGGCGACGAAGAACGGCGGGCCGGTGGACATCCTCAAGGTGCTGAGCAACGGG
CTGCTGGTGGACCCGCACGACGCGGCGGCGATCACCGCCGCGCTGCTCAGCCTGCTCGCC
GACAAGTCCCGGTGGTCGGAGTGCCGCCGCAGCGGCCTCCGCAACATCCACCGCTTCTCC
TGGCCGCACCACTGCCGCCTCTACCTCTCCCACGTCGCCGCCAGCTGCGACCACCCGGCG
CCGCACCAGCTGCTCCGCGTCCCGCCCTCCCCGTCCTCCTCATCCGCCGCCGCCGCCGCC
GCCGGTGGCGGCGGCGCGGCCGCCTCCTCCGAGCCGCTCTCCGACTCGCTGCGCGATCTC
TCGCTCCGCATCTCCGTGGACGCCGCGTCGCCTGACCTCAGCGCTGGGGACTCCGCCGCG
GCAATCTTGGACGCGCTCCGCAGGCGCCGGTCCACGGACAGGCCGGCGGCGAGCTCTGCC
GCCAGGGCGATCGGGTTCGCGCCGGGACGGCGTCAGAGCCTCCTCGTCGTCGCCATCGAC
TGCTACGGCGACGACGGGAAGCCGAACGTGGAGCAGCTCAAGAAGGTGGTCGAGCTGGCG
ATGTCGGCCGGCGACGGCGACGACGCCGGCGGGAGGGGATACGTTCTTTCCACCGGCATG
ACCATCCCCGAGGCCGTCGACGCGCTCAGGGCATGCGGCGCCGACCCGGCCGGCTTCGAC
GCGCTGATCTGCAGCAGCGGCGCGGAGATCTGCTACCCGTGGAAGGGGGAGCAGCTCGCC
GCCGACGAGGAGTACGCCGGGCACGTGGCGTTCCGGTGGCCCGGCGACCACGTGAGGTCC
GCGGTGCCGAGGCTCGGGAAGGCCGACGGCGCGCAGGAGGCGGACCTCGCCGTCGACGCC
GCCGCCTGCTCCGTGCACTGCCACGCCTACGCCGCCAAGGACGCGTCCAAGGTGAAGAAG
GTCGACTGGATCAGGCAGGCGCTGCGGATGCGCGGCTTCCGGTGCAACCTCGTCTACACG
CGCGCGTGCACGCGCCTCAACGTCGTCCCGCTCTCCGCCTCCCGGCCGCGCGCGCTCAGG
TACCTGTCGATACAGTGGGGGATCGACCTGTCCAAGGTGGCGGTGCTCGTCGGCGAGAAG
GGCGACACCGACAGGGAGCGCCTCCTCCCGGGGCTGCACAGGACGGTGATCCTGCCGGGG
ATGGTCGCCGCCGGCAGCGAGGAGCTCCTCCGCGACGAGGACGGGTTCACCACGGAGGAC
GTCGTGGCCATGGACTCCCCCAACATCGTCACCCTCGCCGACGGCCAGGACATCGCCGCC
GCCGCCGCCGACCTCCTCAAGGCCATCTGA

Peptide Sequence

PEP ID

Os11t0236100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:7255817:7258556:-1 gene:Os11g0236100 transcript:Os11t0236100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE 11 description:Similar to Sucrose-phosphate synthase. (Os11t0236100-01)
Sequence

VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL
PVVATKNGGPVDILKVLSNGLLVDPHDAAAITAALLSLLADKSRWSECRRSGLRNIHRFS
WPHHCRLYLSHVAASCDHPAPHQLLRVPPSPSSSSAAAAAAGGGGAAASSEPLSDSLRDL
SLRISVDAASPDLSAGDSAAAILDALRRRRSTDRPAASSAARAIGFAPGRRQSLLVVAID
CYGDDGKPNVEQLKKVVELAMSAGDGDDAGGRGYVLSTGMTIPEAVDALRACGADPAGFD
ALICSSGAEICYPWKGEQLAADEEYAGHVAFRWPGDHVRSAVPRLGKADGAQEADLAVDA
AACSVHCHAYAAKDASKVKKVDWIRQALRMRGFRCNLVYTRACTRLNVVPLSASRPRALR
YLSIQWGIDLSKVAVLVGEKGDTDRERLLPGLHRTVILPGMVAAGSEELLRDEDGFTTED
VVAMDSPNIVTLADGQDIAAAAADLLKAI

Transcript Sequence

Transcript ID

Os11t0236100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:7255817:7258556:-1 gene:Os11g0236100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCROSE PHOSPHATE SYNTHASE 11 description:Similar to Sucrose-phosphate synthase. (Os11t0236100-01)
Sequence

GGTGCTGAAGCTGATCGACCGGTACGACCTCTACGGCCAGGTCGCCTACCCCAAGCACCA
CAAGCAGACCGACGTGCCGCACATCTACCGCCTCGCCGCCAAGACCAAGGGTGTGTTCAT
CAATCCTGCTCTTGTCGAGCCATTCGGCCTCACCATCATAGAGGCTGCTGCATATGGGTT
GCCGGTAGTGGCGACGAAGAACGGCGGGCCGGTGGACATCCTCAAGGTGCTGAGCAACGG
GCTGCTGGTGGACCCGCACGACGCGGCGGCGATCACCGCCGCGCTGCTCAGCCTGCTCGC
CGACAAGTCCCGGTGGTCGGAGTGCCGCCGCAGCGGCCTCCGCAACATCCACCGCTTCTC
CTGGCCGCACCACTGCCGCCTCTACCTCTCCCACGTCGCCGCCAGCTGCGACCACCCGGC
GCCGCACCAGCTGCTCCGCGTCCCGCCCTCCCCGTCCTCCTCATCCGCCGCCGCCGCCGC
CGCCGGTGGCGGCGGCGCGGCCGCCTCCTCCGAGCCGCTCTCCGACTCGCTGCGCGATCT
CTCGCTCCGCATCTCCGTGGACGCCGCGTCGCCTGACCTCAGCGCTGGGGACTCCGCCGC
GGCAATCTTGGACGCGCTCCGCAGGCGCCGGTCCACGGACAGGCCGGCGGCGAGCTCTGC
CGCCAGGGCGATCGGGTTCGCGCCGGGACGGCGTCAGAGCCTCCTCGTCGTCGCCATCGA
CTGCTACGGCGACGACGGGAAGCCGAACGTGGAGCAGCTCAAGAAGGTGGTCGAGCTGGC
GATGTCGGCCGGCGACGGCGACGACGCCGGCGGGAGGGGATACGTTCTTTCCACCGGCAT
GACCATCCCCGAGGCCGTCGACGCGCTCAGGGCATGCGGCGCCGACCCGGCCGGCTTCGA
CGCGCTGATCTGCAGCAGCGGCGCGGAGATCTGCTACCCGTGGAAGGGGGAGCAGCTCGC
CGCCGACGAGGAGTACGCCGGGCACGTGGCGTTCCGGTGGCCCGGCGACCACGTGAGGTC
CGCGGTGCCGAGGCTCGGGAAGGCCGACGGCGCGCAGGAGGCGGACCTCGCCGTCGACGC
CGCCGCCTGCTCCGTGCACTGCCACGCCTACGCCGCCAAGGACGCGTCCAAGGTGAAGAA
GGTCGACTGGATCAGGCAGGCGCTGCGGATGCGCGGCTTCCGGTGCAACCTCGTCTACAC
GCGCGCGTGCACGCGCCTCAACGTCGTCCCGCTCTCCGCCTCCCGGCCGCGCGCGCTCAG
GTACCTGTCGATACAGTGGGGGATCGACCTGTCCAAGGTGGCGGTGCTCGTCGGCGAGAA
GGGCGACACCGACAGGGAGCGCCTCCTCCCGGGGCTGCACAGGACGGTGATCCTGCCGGG
GATGGTCGCCGCCGGCAGCGAGGAGCTCCTCCGCGACGAGGACGGGTTCACCACGGAGGA
CGTCGTGGCCATGGACTCCCCCAACATCGTCACCCTCGCCGACGGCCAGGACATCGCCGC
CGCCGCCGCCGACCTCCTCAAGGCCATCTGAGCTAGTCAGCTAGCTGCTCTGCTCTGCTT
CACTTCACTCTTGCAAATTAAGCTTGATTGCTTCCATGGAATATTGGAATGGGAGTATAA
TTAATGGTTGCTTGATGCTGTTCTTGCATAATTAAACAAGCAGACGTGTCACTAATAATT
TTGTGATGTTTTGTGTATATAAAAGAAACAGTGATAAACTCGATGTTCTGTTCCCCAACG
GGGATTTTGAATGGCTACAATAACCCATACTTGAAATTTGTACAGTTTTTGCAAACGTAT
GTTTATTTGATGGGAGAG