Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0224900-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:6532813:6535926:-1 gene:Os11g0224900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R-gene analog 3 description:Similar to NBS-LRR protein (Fragment). (Os11t0224900-00)
Sequence	ATGGCGGAAGCTGCACTACTTGCTCTTTCAAAGATTGGTTCCTATGCAGCAATTGAAGCG GCCATGGTTGCTAAATCCAAAATTTCTAATCTAATGGAGCTCTCAGCTACTGTGCAACGG ATACGGAGGCAATTTTTGATGATGAACTTCTTTATACGGAAAATGGGTGCCTCTTACCTC AGCGATGAGCTCCTGAAGGGATGGATCGCAGAGGTGCGAATGCTGGCGTACCGTGTTGAG GATGTATTGGACAGCTTTTTCTACCATTCTATTCAATTCAAGAAAGATAAGTTCCTGAAT AAGATTGTTAAGGGATCACACTATGCTGTTGTTTTTAATGCAATTGCTGATGAGTTGGTT CAGATAGAGAAGGATATTGAGCATGTTTCAAAGTTGAAGGACATGTGGGTTTACCCTGTC AGTCAGCTTATTCCTACTCAAGTCACCATCTCTGAACACCGATTTCCTCAGTACAGTTTT CCCCGACTAATGAAAGATGAGGATCTTGTGGGGATGGAGAATAACAGACAACACTTAAAG CAATTATTCAGTCATGGAATTTCAGCTCTCAGGGTGATATCTGTGTGGGGTATGGGTGGC ATGGGGAAGACCACATTGGTCCTTAATGTATATGAGCAACATAAGGAGAAATTTGACATT AATGTGTGGCTTACTGTGTCTCAAGCATTTTCTGTGGAGGCTTTGCTGAGGAAGCTATTA TGGGAGATAAGGCGTAGATGTGAGCTCACAACACCAGGTGATGGTGATAGTGTCAACAAG GAGCAGCAGGCTTCAGATGAGACTGACAAACTGGAGGTTTCACAATTGAAAGAACTGAAG GATGAGTTAAAGAAAGCATTAATGCGAAAGAGATTTATGGTTGTACTTGATGATGTATGG GACCGTCAAGTATTTGACATGATGCATGATGTGTTTGAGGATTTTAGGAATGGAAGTCGC GTTGTGATCACGACAAGGAGAGGGGATGTGGCTGCTCTTGCTCACGAGGGTTGCCAGCTC AAACTTAATCCGTTAGAATTGAACGATGCCCTCCTCCTGTTCAGTAAAAAGGCATTTCCT AATAGCAATGACCTTGAGTGCCCCTTAAAGCTCAAGGACCTAGCCACAGACATTGCTAAG AAAAGCAATGACTCATCACTGACAGAGTGCCGATTGGAGCTAAATGGGCTAGCTACTGAT ATTGCAGAGAAATGCAACTGTTTGCCTTTGGCAAATAGCCCAGCACAGGTTCAAGAGCTA GTTGCTTATATTGTAAAGAACTGCCAGGACTTATTACAGATGGAAAATAATCCATCTGGG CTTCAGAAGCTTGCTACTGATATTTTAAAGAAATGTGAGCTCTTGCCTTTGGTGAAATGC TCAGCAGAGTTGCAGAAGCTCGCCATTGAGATTGTAAAGAAATGTGGGGGCTTGCCGCTT GCAATTGCTTCAGTAGGCAGCTTGCTGTCTGCAAGGATGCAAATAGAGTGTGTGTGGAAG CAGATTCATGATCAGCTTCCATGTGAGCTGGAGAAGGATGATCAGGTCCGAGGAGTTCTA ACTCTGAGCTACTATGACTTGCCTGGAGAGCTCAGAAATTGCTTTCTGTACTGCAGCATG TTCCCAGAAGATTACCTCTTGTCAAGGGAGGTTCTTGTGAGACAGTGGATTGCGGAAGGT TTTGTGGAAAAGAAAGGGGACAGCACTCTGGAGGAGGTGGCAGAGGGATATCTCATGGAG CTGGTTCATCGAAACATGCTTCAACTCGTGTATAATGATGAGCTTGGCAGGGTTAGTACA TGCAGCATGCATGACATTCTGAGAGAGCTGGCTCTTTCTATCTCCAAAGCAGAGTTGTTT GGCACCGCAAACAATTTTAGTGAGATGGCACAGATGAACACAAATGTGCGTCGCCTGTCA GCATGTCGATGGACACACACAGAACATGATTTATCAAAGATAAAATTCCCACATCTTCGA ACCGTAATTGCACTCCAGTCAAGTATGGATTTTGTACCATCAATATTATCTGAATCTAAG CACCTTACTGTCCTTGAGCTGCAAGACTCAGGAATCAACCAAGTCCCAGCATCGATAGGG GATCTTTTTAACTTACGGTACATTGGCCTAAGGAACACAGCAGTAAAATCTCTACCGGAC TCTATAGAGAAGCTCGTGAATCTTCAAACTCTTGATGCTAAGTCAACCAAGATAGAAAAA TTACCTAGTGGGATAGTGAAGCTCTATAAGTTAAGACACTTGCTGATTGACAGATTAAGT GATGGTACAAGAACGGAATTCCGGTATTTCGAAGGAGTGGTAGCACCAAAAGGGTTATCG AGGTTGGAAGAACTGCAGACACTTGAGACTGTAGAAGCTAGCAAGGACTTGGGGGAACAT CTTGAAAAAATGATCCAATTAAGAAATCTCTGGATCGGCAATATAAAAGCTGGGCACTGT GCACAGCTGCTTGCTTCATTGTCTAAGATGCCGCTTCTTTATAGCTTGCTTCTGTGTGCA AGTGATGAGGAGGAGAAACTTAACATCGAAAAACTCGTACCGACATCCACAATGCTCCAA AAGCTAATTATCAGAGGATGCACCAGTGAGAGCACACTTGAGTGCCCGGTGTTTCAGGAC CATGGACGACGCCTGAAGTATCTAGCTCTAAGCCGGTGTCACCTTGGGCATGATGCATTT GAGAGGCTCGAAAAGTGTGTGCCGAACCTGACATATTTGAGTCTTAACAAGGTGCATACC AATGGTGCACACACTTTGGTTCTTCCTGCAAAGTCGTTTCCGCTGCTGAAGACACTCGTC TTGAGGAACATGTCCAATGTCAATCTTCTGAAAATTGGAGCTGACGCCCTTAAATGTATC GAAGGTTTATACATTGTGTCATTGTCAAATCTAAAGAGCGTCCCTGAAGGCATTGAATCC CTTAGCTCCCTTAAGAAACTCACCCTTCTAGGCTTGCACAATGACTTCAAAGCTGAGTGG AACAAGAAACGAATGCACGAGAAGATGAAACATGTCACTAAGCTTCGTGTGTACGAGTGG TCCTAA

Peptide Sequence

PEP ID	Os11t0224900-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:6532813:6535926:-1 gene:Os11g0224900 transcript:Os11t0224900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R-gene analog 3 description:Similar to NBS-LRR protein (Fragment). (Os11t0224900-00)
Sequence	MAEAALLALSKIGSYAAIEAAMVAKSKISNLMELSATVQRIRRQFLMMNFFIRKMGASYL SDELLKGWIAEVRMLAYRVEDVLDSFFYHSIQFKKDKFLNKIVKGSHYAVVFNAIADELV QIEKDIEHVSKLKDMWVYPVSQLIPTQVTISEHRFPQYSFPRLMKDEDLVGMENNRQHLK QLFSHGISALRVISVWGMGGMGKTTLVLNVYEQHKEKFDINVWLTVSQAFSVEALLRKLL WEIRRRCELTTPGDGDSVNKEQQASDETDKLEVSQLKELKDELKKALMRKRFMVVLDDVW DRQVFDMMHDVFEDFRNGSRVVITTRRGDVAALAHEGCQLKLNPLELNDALLLFSKKAFP NSNDLECPLKLKDLATDIAKKSNDSSLTECRLELNGLATDIAEKCNCLPLANSPAQVQEL VAYIVKNCQDLLQMENNPSGLQKLATDILKKCELLPLVKCSAELQKLAIEIVKKCGGLPL AIASVGSLLSARMQIECVWKQIHDQLPCELEKDDQVRGVLTLSYYDLPGELRNCFLYCSM FPEDYLLSREVLVRQWIAEGFVEKKGDSTLEEVAEGYLMELVHRNMLQLVYNDELGRVST CSMHDILRELALSISKAELFGTANNFSEMAQMNTNVRRLSACRWTHTEHDLSKIKFPHLR TVIALQSSMDFVPSILSESKHLTVLELQDSGINQVPASIGDLFNLRYIGLRNTAVKSLPD SIEKLVNLQTLDAKSTKIEKLPSGIVKLYKLRHLLIDRLSDGTRTEFRYFEGVVAPKGLS RLEELQTLETVEASKDLGEHLEKMIQLRNLWIGNIKAGHCAQLLASLSKMPLLYSLLLCA SDEEEKLNIEKLVPTSTMLQKLIIRGCTSESTLECPVFQDHGRRLKYLALSRCHLGHDAF ERLEKCVPNLTYLSLNKVHTNGAHTLVLPAKSFPLLKTLVLRNMSNVNLLKIGADALKCI EGLYIVSLSNLKSVPEGIESLSSLKKLTLLGLHNDFKAEWNKKRMHEKMKHVTKLRVYEW S

Transcript Sequence

Transcript ID	Os11t0224900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:6532813:6535926:-1 gene:Os11g0224900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R-gene analog 3 description:Similar to NBS-LRR protein (Fragment). (Os11t0224900-00)
Sequence	ATGGCGGAAGCTGCACTACTTGCTCTTTCAAAGATTGGTTCCTATGCAGCAATTGAAGCG GCCATGGTTGCTAAATCCAAAATTTCTAATCTAATGGAGCTCTCAGCTACTGTGCAACGG ATACGGAGGCAATTTTTGATGATGAACTTCTTTATACGGAAAATGGGTGCCTCTTACCTC AGCGATGAGCTCCTGAAGGGATGGATCGCAGAGGTGCGAATGCTGGCGTACCGTGTTGAG GATGTATTGGACAGCTTTTTCTACCATTCTATTCAATTCAAGAAAGATAAGTTCCTGAAT AAGATTGTTAAGGGATCACACTATGCTGTTGTTTTTAATGCAATTGCTGATGAGTTGGTT CAGATAGAGAAGGATATTGAGCATGTTTCAAAGTTGAAGGACATGTGGGTTTACCCTGTC AGTCAGCTTATTCCTACTCAAGTCACCATCTCTGAACACCGATTTCCTCAGTACAGTTTT CCCCGACTAATGAAAGATGAGGATCTTGTGGGGATGGAGAATAACAGACAACACTTAAAG CAATTATTCAGTCATGGAATTTCAGCTCTCAGGGTGATATCTGTGTGGGGTATGGGTGGC ATGGGGAAGACCACATTGGTCCTTAATGTATATGAGCAACATAAGGAGAAATTTGACATT AATGTGTGGCTTACTGTGTCTCAAGCATTTTCTGTGGAGGCTTTGCTGAGGAAGCTATTA TGGGAGATAAGGCGTAGATGTGAGCTCACAACACCAGGTGATGGTGATAGTGTCAACAAG GAGCAGCAGGCTTCAGATGAGACTGACAAACTGGAGGTTTCACAATTGAAAGAACTGAAG GATGAGTTAAAGAAAGCATTAATGCGAAAGAGATTTATGGTTGTACTTGATGATGTATGG GACCGTCAAGTATTTGACATGATGCATGATGTGTTTGAGGATTTTAGGAATGGAAGTCGC GTTGTGATCACGACAAGGAGAGGGGATGTGGCTGCTCTTGCTCACGAGGGTTGCCAGCTC AAACTTAATCCGTTAGAATTGAACGATGCCCTCCTCCTGTTCAGTAAAAAGGCATTTCCT AATAGCAATGACCTTGAGTGCCCCTTAAAGCTCAAGGACCTAGCCACAGACATTGCTAAG AAAAGCAATGACTCATCACTGACAGAGTGCCGATTGGAGCTAAATGGGCTAGCTACTGAT ATTGCAGAGAAATGCAACTGTTTGCCTTTGGCAAATAGCCCAGCACAGGTTCAAGAGCTA GTTGCTTATATTGTAAAGAACTGCCAGGACTTATTACAGATGGAAAATAATCCATCTGGG CTTCAGAAGCTTGCTACTGATATTTTAAAGAAATGTGAGCTCTTGCCTTTGGTGAAATGC TCAGCAGAGTTGCAGAAGCTCGCCATTGAGATTGTAAAGAAATGTGGGGGCTTGCCGCTT GCAATTGCTTCAGTAGGCAGCTTGCTGTCTGCAAGGATGCAAATAGAGTGTGTGTGGAAG CAGATTCATGATCAGCTTCCATGTGAGCTGGAGAAGGATGATCAGGTCCGAGGAGTTCTA ACTCTGAGCTACTATGACTTGCCTGGAGAGCTCAGAAATTGCTTTCTGTACTGCAGCATG TTCCCAGAAGATTACCTCTTGTCAAGGGAGGTTCTTGTGAGACAGTGGATTGCGGAAGGT TTTGTGGAAAAGAAAGGGGACAGCACTCTGGAGGAGGTGGCAGAGGGATATCTCATGGAG CTGGTTCATCGAAACATGCTTCAACTCGTGTATAATGATGAGCTTGGCAGGGTTAGTACA TGCAGCATGCATGACATTCTGAGAGAGCTGGCTCTTTCTATCTCCAAAGCAGAGTTGTTT GGCACCGCAAACAATTTTAGTGAGATGGCACAGATGAACACAAATGTGCGTCGCCTGTCA GCATGTCGATGGACACACACAGAACATGATTTATCAAAGATAAAATTCCCACATCTTCGA ACCGTAATTGCACTCCAGTCAAGTATGGATTTTGTACCATCAATATTATCTGAATCTAAG CACCTTACTGTCCTTGAGCTGCAAGACTCAGGAATCAACCAAGTCCCAGCATCGATAGGG GATCTTTTTAACTTACGGTACATTGGCCTAAGGAACACAGCAGTAAAATCTCTACCGGAC TCTATAGAGAAGCTCGTGAATCTTCAAACTCTTGATGCTAAGTCAACCAAGATAGAAAAA TTACCTAGTGGGATAGTGAAGCTCTATAAGTTAAGACACTTGCTGATTGACAGATTAAGT GATGGTACAAGAACGGAATTCCGGTATTTCGAAGGAGTGGTAGCACCAAAAGGGTTATCG AGGTTGGAAGAACTGCAGACACTTGAGACTGTAGAAGCTAGCAAGGACTTGGGGGAACAT CTTGAAAAAATGATCCAATTAAGAAATCTCTGGATCGGCAATATAAAAGCTGGGCACTGT GCACAGCTGCTTGCTTCATTGTCTAAGATGCCGCTTCTTTATAGCTTGCTTCTGTGTGCA AGTGATGAGGAGGAGAAACTTAACATCGAAAAACTCGTACCGACATCCACAATGCTCCAA AAGCTAATTATCAGAGGATGCACCAGTGAGAGCACACTTGAGTGCCCGGTGTTTCAGGAC CATGGACGACGCCTGAAGTATCTAGCTCTAAGCCGGTGTCACCTTGGGCATGATGCATTT GAGAGGCTCGAAAAGTGTGTGCCGAACCTGACATATTTGAGTCTTAACAAGGTGCATACC AATGGTGCACACACTTTGGTTCTTCCTGCAAAGTCGTTTCCGCTGCTGAAGACACTCGTC TTGAGGAACATGTCCAATGTCAATCTTCTGAAAATTGGAGCTGACGCCCTTAAATGTATC GAAGGTTTATACATTGTGTCATTGTCAAATCTAAAGAGCGTCCCTGAAGGCATTGAATCC CTTAGCTCCCTTAAGAAACTCACCCTTCTAGGCTTGCACAATGACTTCAAAGCTGAGTGG AACAAGAAACGAATGCACGAGAAGATGAAACATGTCACTAAGCTTCGTGTGTACGAGTGG TCCTAATTCAGTATAGTCCTGCATGGATCTGAAGAACATGAAGCTGCATGCTGC