Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0224600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:6519995:6521680:-1 gene:Os11g0224600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224600-01)
Sequence

ATGGCCGCCTCTCCCGCAATGGCGACACTCCTCCTCCTCCTCCTCCATGCTGTCCTCGTC
GCGGCAGCCGATGCCGGCGCCGCCGATAAGGAGGCCTATGCGGCAACAGGATCAACCGCT
GGCAAGGAGACCGCTGCGGCGGCCGACAAGGAGACCTCTGCAGCGGCCGGATCAACCGCG
GGCGCCGTCCCTGACCCCAACATCTTCAACAAGGAGGCCGTGTGCCCCAAGACGACGGAC
GAGAAGGCGTGCCAGCAACTGGTGAAGGTCCTGCCGCCCGAGTTTGCAGAGACGAAAGAC
GCCAAGGGCCTCGCCAAGCTGTGCATCTCCAGCGTCGGGTTCTCGGCGGAGCAGTTCACC
AAGGACGCCATCGCCGCCGTGCAGGAGTGCAAGAAGCCCGACAAGTGCCTCGACAGCTGC
GTCCAGGCTAGCACCGCCGTGACCGACGCCCTGAAGCCCTCCGGCGCCGGCGTCAACACC
GTCAAGGTCCCCGAGGACGAATGGCTCCTCGCCATCCACGCCAGCTTCTCGCAGCTGCTC
CGTGGCCCCGCCGGCGGCGTGAGCCGCCCGCCTCTCTGCAAGACGTGCTGCGACGACGGC
TCGTGCAAGGACGCCAAGAAGCTCAACGTCGTCTCGGTGTTCTCGCGCATGTGGGACTTC
CTGGATTTCACCGATGCGGTGCTCGACGATTTGTATCCTTTGACGAAGACGACGGGGACC
AAGGCCACGACGACAGCCGGATCAACCGCCGATAAGGTAGCCTATGCGGCAAAAGGATCA
ACCGAAGGCAAGGAGACCGCTCCGGCGGCCGAATCAACTGTCGATAAGGAGACCTCTCCA
GCGGCCGAATCAACCGTCGACATGGCGACCTCTGCGGCAGCCGGATCAACCGCCGACAAA
AACGCCTACCCGGCGGCCGAATCAACTGCCGATAAGGAGACCTCTCCAGCGGCCGAATCA
ACCGCCGACACGGCAACCTCTGCGGCAGCCGGACCAACTGCCGATAAGGAGACCTCTCCA
GCCGCCGAATCAACCGCCGACACGGCAACCTCTGCGGCAGCCGGATCAACTGCCGATAAG
GAGACCTCTCTAGCGGCCGAACCAACCGCCGACACGGCAACCTCTGCGGTAGCCGGATCA
ACTGCCGATAAGGAGACCTCTCCAGCGGCCGAACCAACCGCCGACACGGCGACCTCTGCG
GCAGCCGGATCAACCGCTGATAAGGAGACCTCTCCAGCGGCTGAATCAACCGTCGACACG
GCGACCTCTGCGGCAGCCGGATCAACCGCCGATAAGGAGACCTCTCCAGCAGCCGAATCA
ACCGTCGACAAGGAGACCTCTGCGGTGGCCGGATCAACCGCCGATAAGAACACCTATCCA
GCGGCCGGATCAGCCGCCGAGAAGGAGACCTCTTCGGCAGCCGGATCAGCTCCTGTCGTC
GACACTGCGCCTGCGGCCCCGCCGACAACTTATGTTTAA

Peptide Sequence

PEP ID

Os11t0224600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:6519995:6521680:-1 gene:Os11g0224600 transcript:Os11t0224600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224600-01)
Sequence

MAASPAMATLLLLLLHAVLVAAADAGAADKEAYAATGSTAGKETAAAADKETSAAAGSTA
GAVPDPNIFNKEAVCPKTTDEKACQQLVKVLPPEFAETKDAKGLAKLCISSVGFSAEQFT
KDAIAAVQECKKPDKCLDSCVQASTAVTDALKPSGAGVNTVKVPEDEWLLAIHASFSQLL
RGPAGGVSRPPLCKTCCDDGSCKDAKKLNVVSVFSRMWDFLDFTDAVLDDLYPLTKTTGT
KATTTAGSTADKVAYAAKGSTEGKETAPAAESTVDKETSPAAESTVDMATSAAAGSTADK
NAYPAAESTADKETSPAAESTADTATSAAAGPTADKETSPAAESTADTATSAAAGSTADK
ETSLAAEPTADTATSAVAGSTADKETSPAAEPTADTATSAAAGSTADKETSPAAESTVDT
ATSAAAGSTADKETSPAAESTVDKETSAVAGSTADKNTYPAAGSAAEKETSSAAGSAPVV
DTAPAAPPTTYV

Transcript Sequence

Transcript ID

Os11t0224600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:6519995:6521680:-1 gene:Os11g0224600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224600-01)
Sequence

ATCCCAGCAAAATCATCTCGATCGATCGACAAAGCTATAGCTAGCCCAGTCATGGCCGCC
TCTCCCGCAATGGCGACACTCCTCCTCCTCCTCCTCCATGCTGTCCTCGTCGCGGCAGCC
GATGCCGGCGCCGCCGATAAGGAGGCCTATGCGGCAACAGGATCAACCGCTGGCAAGGAG
ACCGCTGCGGCGGCCGACAAGGAGACCTCTGCAGCGGCCGGATCAACCGCGGGCGCCGTC
CCTGACCCCAACATCTTCAACAAGGAGGCCGTGTGCCCCAAGACGACGGACGAGAAGGCG
TGCCAGCAACTGGTGAAGGTCCTGCCGCCCGAGTTTGCAGAGACGAAAGACGCCAAGGGC
CTCGCCAAGCTGTGCATCTCCAGCGTCGGGTTCTCGGCGGAGCAGTTCACCAAGGACGCC
ATCGCCGCCGTGCAGGAGTGCAAGAAGCCCGACAAGTGCCTCGACAGCTGCGTCCAGGCT
AGCACCGCCGTGACCGACGCCCTGAAGCCCTCCGGCGCCGGCGTCAACACCGTCAAGGTC
CCCGAGGACGAATGGCTCCTCGCCATCCACGCCAGCTTCTCGCAGCTGCTCCGTGGCCCC
GCCGGCGGCGTGAGCCGCCCGCCTCTCTGCAAGACGTGCTGCGACGACGGCTCGTGCAAG
GACGCCAAGAAGCTCAACGTCGTCTCGGTGTTCTCGCGCATGTGGGACTTCCTGGATTTC
ACCGATGCGGTGCTCGACGATTTGTATCCTTTGACGAAGACGACGGGGACCAAGGCCACG
ACGACAGCCGGATCAACCGCCGATAAGGTAGCCTATGCGGCAAAAGGATCAACCGAAGGC
AAGGAGACCGCTCCGGCGGCCGAATCAACTGTCGATAAGGAGACCTCTCCAGCGGCCGAA
TCAACCGTCGACATGGCGACCTCTGCGGCAGCCGGATCAACCGCCGACAAAAACGCCTAC
CCGGCGGCCGAATCAACTGCCGATAAGGAGACCTCTCCAGCGGCCGAATCAACCGCCGAC
ACGGCAACCTCTGCGGCAGCCGGACCAACTGCCGATAAGGAGACCTCTCCAGCCGCCGAA
TCAACCGCCGACACGGCAACCTCTGCGGCAGCCGGATCAACTGCCGATAAGGAGACCTCT
CTAGCGGCCGAACCAACCGCCGACACGGCAACCTCTGCGGTAGCCGGATCAACTGCCGAT
AAGGAGACCTCTCCAGCGGCCGAACCAACCGCCGACACGGCGACCTCTGCGGCAGCCGGA
TCAACCGCTGATAAGGAGACCTCTCCAGCGGCTGAATCAACCGTCGACACGGCGACCTCT
GCGGCAGCCGGATCAACCGCCGATAAGGAGACCTCTCCAGCAGCCGAATCAACCGTCGAC
AAGGAGACCTCTGCGGTGGCCGGATCAACCGCCGATAAGAACACCTATCCAGCGGCCGGA
TCAGCCGCCGAGAAGGAGACCTCTTCGGCAGCCGGATCAGCTCCTGTCGTCGACACTGCG
CCTGCGGCCCCGCCGACAACTTATGTTTAATTACAAACATTCGGTACTTAATATTTTTTA
GGATGCTATACGAACTTTAAATAACTCTTCCAAAATTTTTACTACACCAATAAAAAATCC
TTACAAAATTTTGACTACAGCAATGTTTGTAAGGAGTTAATCGAACAAGGTCTAAGTTGA
TACTCT