Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0224400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:6509996:6511215:-1 gene:Os11g0224400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224400-01)
Sequence

ATGGCCGCCTCTCCCGCAATGCCGTCACTCCTCCTCCTCCTCCTCCTAGCCGTTCTCGTC
TCGGCGGCCGATGCCTACGACTCCGCCGCCAGCGCCAACACCAACGCCGGCGCCATCCCC
GACCCCAACATCTTGAACATGGAGGCCATGTGCCCCAAGACGACGGACGTGAAGGCGTGC
CAGCAACTGGTGAAGAACATGCCGTCCAACATCGTCGCGGGGAAGAAGGACGCCAGGAGC
ATCGCCCGGGGGTGCATCGCCACCGCCTGGTTCGTGGCGAGGGACGGCGCCAAGGACTGC
ACCGCCGCCGTGGACGAGTGCAAGGACAAGGTCGACCAGTGCCTCGACAGCTGCCGCCAC
GCCTTCGCCGCCGTGAACGACGCCCTGGAGCCCCAGGGCACCGGCGACGACGCCGTCAAG
GTCCCCGAGGACGAGAAGCTCCTCGCCATCCACGCCAGCCTCACGCAGCTGCTCCGCGGC
CCCACCGGCACGCGCCGCCCGCCCCTCTGCAACACCTGCTGCCAGGACGGCTCGTGCACG
GAGGAGAAGAAGCGCAACGTCGTCGCGCTGTTCGTGCAATTGTGGAGCTTGCTGGATTTC
GCCGACGCGGTGCTCGAGGACCTGTATCCTCTGACGAAGCTGCCAGGGGACAAGGCCGCG
GGATCAGATACCTCTGCGGCGGCGGCCGGATCAACCGCCGACAAGGAGACCTCTGCGGCG
GCTGGATCAACCGCCGACACGGCGACCTCTGCGGCGGCCGGATCAACCTCCGCAAAGGAG
ACATCTCCAGTAGCCGGATCAACCGCCGATAAGACCTATGCAGCGGCCGGATCAGCTCCT
CCTGTCGTCGACACTGCGCCTGCTCCTCCCGTGACAACTTATGATTAA

Peptide Sequence

PEP ID

Os11t0224400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:6509996:6511215:-1 gene:Os11g0224400 transcript:Os11t0224400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224400-01)
Sequence

MAASPAMPSLLLLLLLAVLVSAADAYDSAASANTNAGAIPDPNILNMEAMCPKTTDVKAC
QQLVKNMPSNIVAGKKDARSIARGCIATAWFVARDGAKDCTAAVDECKDKVDQCLDSCRH
AFAAVNDALEPQGTGDDAVKVPEDEKLLAIHASLTQLLRGPTGTRRPPLCNTCCQDGSCT
EEKKRNVVALFVQLWSLLDFADAVLEDLYPLTKLPGDKAAGSDTSAAAAGSTADKETSAA
AGSTADTATSAAAGSTSAKETSPVAGSTADKTYAAAGSAPPVVDTAPAPPVTTYD

Transcript Sequence

Transcript ID

Os11t0224400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:6509996:6511215:-1 gene:Os11g0224400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0224400-01)
Sequence

AGCCATCGATCACCATTAATTCATCTCCATCGACAAAGCTAGCTAAGCCCAGTCATGGCC
GCCTCTCCCGCAATGCCGTCACTCCTCCTCCTCCTCCTCCTAGCCGTTCTCGTCTCGGCG
GCCGATGCCTACGACTCCGCCGCCAGCGCCAACACCAACGCCGGCGCCATCCCCGACCCC
AACATCTTGAACATGGAGGCCATGTGCCCCAAGACGACGGACGTGAAGGCGTGCCAGCAA
CTGGTGAAGAACATGCCGTCCAACATCGTCGCGGGGAAGAAGGACGCCAGGAGCATCGCC
CGGGGGTGCATCGCCACCGCCTGGTTCGTGGCGAGGGACGGCGCCAAGGACTGCACCGCC
GCCGTGGACGAGTGCAAGGACAAGGTCGACCAGTGCCTCGACAGCTGCCGCCACGCCTTC
GCCGCCGTGAACGACGCCCTGGAGCCCCAGGGCACCGGCGACGACGCCGTCAAGGTCCCC
GAGGACGAGAAGCTCCTCGCCATCCACGCCAGCCTCACGCAGCTGCTCCGCGGCCCCACC
GGCACGCGCCGCCCGCCCCTCTGCAACACCTGCTGCCAGGACGGCTCGTGCACGGAGGAG
AAGAAGCGCAACGTCGTCGCGCTGTTCGTGCAATTGTGGAGCTTGCTGGATTTCGCCGAC
GCGGTGCTCGAGGACCTGTATCCTCTGACGAAGCTGCCAGGGGACAAGGCCGCGGGATCA
GATACCTCTGCGGCGGCGGCCGGATCAACCGCCGACAAGGAGACCTCTGCGGCGGCTGGA
TCAACCGCCGACACGGCGACCTCTGCGGCGGCCGGATCAACCTCCGCAAAGGAGACATCT
CCAGTAGCCGGATCAACCGCCGATAAGACCTATGCAGCGGCCGGATCAGCTCCTCCTGTC
GTCGACACTGCGCCTGCTCCTCCCGTGACAACTTATGATTAATTACAAACATTCGGTATT
TCATATTTTGGAGGATGCTATAGGAACTTTAAATAACTCTTCCAAAATTTTTAGGACACC
AACGAAAATCCTTACAAAATTTTGACTAATCAACGTTTCTAAGGAGTTTAACAAATTTCT
ATACGTGTAACTTTTTCTTACATATCTGAGTAGGTGCATTGCTGAGGGCAGGGTGCGCCT
TCCGTGGTTGTCATTCGAAATTGTCTTTGTAACCTCGTCAATTTAATGAAGTTTAGAATC
AAAATGATGAGCCTTTTATC