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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0216400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:6088031:6091472:-1 gene:Os11g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S8, subtilisin-related domain containing protein. (Os11t0216400-01)
Sequence

ATGGCCCTCGCGCTGCGACTCCGGCGAGCCCTCGCCGCCGCCTCCACCTCCGCCTCCCCC
TTCCTCCGCCCGGCCGCGTCCGCCTCCCGGTCTGCCCCCCTCGCGGCGGCGCCGCTGCCG
CCGCCGCACCAGGTCTCGCGGCCGTGGCTCCCCGCCGCCGGGTTCCGGTCGTCGGCGGCG
GCGTCGGCGGCGGCGCGCGGGGATGACTACGGGAGGCGCGACGTGGACGAGAAGATATCC
CCCGACGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTC
CCCGACCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAAG
GTCGTCGGAAGTTATGAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATAT
GTTGGTTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGA
GTTGTATTCATATTACCTGATTCATATCTTTATCCAGAGACAAAGGAGTATGGAGGAGAC
AAATATGAAAATGGTGTGATCACCCCAAGACCACCTCCTGTTCATTATAGCAAACCTTCA
AGGACTGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAAT
TACCAGAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGG
CAGAATTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACA
ACACAATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAA
GAGCGCAGGAACTTCAACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCG
CCTGGAACTTATGGTCAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACT
TATCCTGGAAGCAACCAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGG
CAGGGGCCTGGACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCT
AGCCAAAGCGAAGGACAACAAGAGAGCTGGCGGGGAAGGCAATAA

Peptide Sequence

PEP ID

Os11t0216400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:6088031:6091472:-1 gene:Os11g0216400 transcript:Os11t0216400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S8, subtilisin-related domain containing protein. (Os11t0216400-01)
Sequence

MALALRLRRALAAASTSASPFLRPAASASRSAPLAAAPLPPPHQVSRPWLPAAGFRSSAA
ASAAARGDDYGRRDVDEKISPDEILFEGCDYNHWLITMEFPDPKPTREEMIETYLQTLAK
VVGSYEEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVVFILPDSYLYPETKEYGGD
KYENGVITPRPPPVHYSKPSRTDRNRNYRGNYQNGPPQGNYQNSPPPYGSQQDGRGYAPR
QNYADRPGYSGTSGGYQSQTTQYQGHANPAGQGQGYYNSQERRNFNQGQGGDFRPGGPSA
PGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQGPGPAYGGDNWQGGSNQYP
SQSEGQQESWRGRQ

Transcript Sequence

Transcript ID

Os11t0216400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:6088031:6091472:-1 gene:Os11g0216400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S8, subtilisin-related domain containing protein. (Os11t0216400-01)
Sequence

CTCTCTCCTCCACCCCGCGCCGCCCAAACCCTAGCCCTCGCCGCCATGGCCCTCGCGCTG
CGACTCCGGCGAGCCCTCGCCGCCGCCTCCACCTCCGCCTCCCCCTTCCTCCGCCCGGCC
GCGTCCGCCTCCCGGTCTGCCCCCCTCGCGGCGGCGCCGCTGCCGCCGCCGCACCAGGTC
TCGCGGCCGTGGCTCCCCGCCGCCGGGTTCCGGTCGTCGGCGGCGGCGTCGGCGGCGGCG
CGCGGGGATGACTACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGACGAGATCCTC
TTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGACCCCAAGCCC
ACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAAGGTCGTCGGAAGTTAT
GAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGGTTTTCAAGCT
GTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGTATTCATATTA
CCTGATTCATATCTTTATCCAGAGACAAAGGAGTATGGAGGAGACAAATATGAAAATGGT
GTGATCACCCCAAGACCACCTCCTGTTCATTATAGCAAACCTTCAAGGACTGACAGGAAC
CGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCAGAACAGTCCT
CCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGGCAGAATTATGCAGAT
CGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACAATACCAAGGG
CATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAAGAGCGCAGGAACTTC
AACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCGCCTGGAACTTATGGT
CAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACTTATCCTGGAAGCAAC
CAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGGCAGGGGCCTGGACCT
GCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCTAGCCAAAGCGAAGGA
CAACAAGAGAGCTGGCGGGGAAGGCAATAAGGGCTTTAACATGTGTTCCAGTCACGGACG
AGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCACCTGTACAATAAATGACTGC
GCTGCTTTACTATTTCTTGCTGCTTGCATTCATGTTCTGAAGAATGAGCTAAGCCTAGTA
CCAACAGTCTAAATGGATGCAGACATTAATTTTGTTGTTCTTAGCCATATTGTCATTTAC
ATCACAAGGGCTCTTCATTTTTAATGATTGGCATGCGTGTCTATCACTAATTGAATCGTG
GCATCGGCCTACAGTTGCTAGTTCCCAGAAGTTGAATCTTATCACAGATGGAATG