Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0216000-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:6060190:6065434:1 gene:Os11g0216000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os11t0216000-01);Similar to Pyruvate kinase. (Os11t0216000-02)
Sequence

GAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCA
TATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGC
CCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGACCA
ATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCT
TCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACT
CTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTT
GTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGC
CCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTAT
GATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCC
CATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTT
CAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAA
ATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCA
CCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAA
CCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCA
GAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCG
GAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTGCA
GAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAGGT
GATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTA
AAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAG
TACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACA
AAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTAC
CCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGG
ATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTG
ATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCG
TAA

Peptide Sequence

PEP ID

Os11t0216000-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:6060190:6065434:1 gene:Os11g0216000 transcript:Os11t0216000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os11t0216000-01);Similar to Pyruvate kinase. (Os11t0216000-02)
Sequence

ECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVNKLCPVMLDTLGPEIQVHNSTGGP
IELKAGNHVTITPDLSKAPSSEILPIKFGGLAKAVKKGDTLFIGQYLFTGSETTSSWLEV
VETSGENVECLVTNTATLAGPMFTLHVSKAHVSLPTLSDYDKEVISTWGLHNSVDIISLS
HTRSAEDVRELRSFLQSHGLQDTQIYAKVENTEGLDHFDEILQEADGVIISRGDLGIDLP
PEDVFISQKTAIKKCNLAGKPVIITRVVDSMIDNLRPTRAEATDVANAVLDGTDGILLGA
ETHRGPYPVDAVSTVGRICAEAESVYNQLVHFKKLVKHVGDPMPHEESVASSAVRTAMKV
KAAAIVVFTFSGRAARLVAKYKPPMPVLAVVFPREGSDPTKWRSYGTTQARQCFAARGVY
PLMASTEEAETGGLTREEYGIKLAQNYGRSVGMLKPYDRLIIFQKIGDSSVVKIIECDSS

Transcript Sequence

Transcript ID

Os11t0216000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:6060190:6065434:1 gene:Os11g0216000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os11t0216000-01);Similar to Pyruvate kinase. (Os11t0216000-02)
Sequence

AAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTT
CATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGT
GCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGAC
CAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCT
CTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATA
CTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGG
TTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAG
GCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATT
ATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTT
CCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCC
TTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATG
AAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTC
CACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCA
AACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTG
CAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTG
CGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTG
CAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAG
GTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGG
TAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCA
AGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAA
CAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCT
ACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACG
GGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGT
TGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTT
CGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGAT
TACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAAT
TGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTC
AAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGA
CATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATT