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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0215100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:5996508:5997392:1 gene:Os11g0215100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0215100-01)
Sequence

ATGCCCCTCCTGCTGCAGCTGGCGCTCGCCGTCGCCGTCGCCGTCGCCATGGTCGGCACG
GCAACGACGACGACGACGCACACGCGGTTCTACATGCACGACACGGTGACCGCGTCGGCG
TCAGGGGGCGGGCCGGCGGCGACGGCGGTGCGCGTGGTGAGGGGCGTGGCGGCGGCGGCG
CTGCCGGGCGACGCGGTGAACCGGTTCGGAGACCTGTACGCCATCGACGACCCGCTGACG
GACGGCGCCGACGCGGCGTCGTCCGCCGCCGTGGGGCGCGCCAGGGGGTTCTACATGTTC
TCGTCGCGGACGGACTCGGCGCTGCTGTTCAGCGCCACCATGGAGTTCACGGCGGGGGTG
CACCGCGGCGGCGCCGTGTCGGTGCTCGCCAGGGACGCCATCCTCGACGAGGTGAGGGAG
CTGCCGGTGGTCGGCGGCGCCGGCGTGCTCCGCGGCGCCGCCGGGTACGGCCTCCTCAGG
ACGCACTCCTTCAACGCCACCACCAACAACGCCGTCCTGCAGATCGACTTGTACCTCAGC
GTGTAG

Peptide Sequence

PEP ID

Os11t0215100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:5996508:5997392:1 gene:Os11g0215100 transcript:Os11t0215100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0215100-01)
Sequence

MPLLLQLALAVAVAVAMVGTATTTTTHTRFYMHDTVTASASGGGPAATAVRVVRGVAAAA
LPGDAVNRFGDLYAIDDPLTDGADAASSAAVGRARGFYMFSSRTDSALLFSATMEFTAGV
HRGGAVSVLARDAILDEVRELPVVGGAGVLRGAAGYGLLRTHSFNATTNNAVLQIDLYLS
V

Transcript Sequence

Transcript ID

Os11t0215100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:5996508:5997392:1 gene:Os11g0215100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0215100-01)
Sequence

AATGGCGCCATCCACCATTACAAAGGTGTCTCCACCGATCGAACGTTCGACGTCGAACCA
CCACTAGCTAGCTAGCTAGCCATGCCCCTCCTGCTGCAGCTGGCGCTCGCCGTCGCCGTC
GCCGTCGCCATGGTCGGCACGGCAACGACGACGACGACGCACACGCGGTTCTACATGCAC
GACACGGTGACCGCGTCGGCGTCAGGGGGCGGGCCGGCGGCGACGGCGGTGCGCGTGGTG
AGGGGCGTGGCGGCGGCGGCGCTGCCGGGCGACGCGGTGAACCGGTTCGGAGACCTGTAC
GCCATCGACGACCCGCTGACGGACGGCGCCGACGCGGCGTCGTCCGCCGCCGTGGGGCGC
GCCAGGGGGTTCTACATGTTCTCGTCGCGGACGGACTCGGCGCTGCTGTTCAGCGCCACC
ATGGAGTTCACGGCGGGGGTGCACCGCGGCGGCGCCGTGTCGGTGCTCGCCAGGGACGCC
ATCCTCGACGAGGTGAGGGAGCTGCCGGTGGTCGGCGGCGCCGGCGTGCTCCGCGGCGCC
GCCGGGTACGGCCTCCTCAGGACGCACTCCTTCAACGCCACCACCAACAACGCCGTCCTG
CAGATCGACTTGTACCTCAGCGTGTAGAAGATCGACTACAAGTTCTTGCACACGATCTTA
ATTGCGCTTACCGTGTACTTACCGACTACAAGTTACTCAAAGGTGTTGATTCCATATATT
TTCATTCCACGGAGGAGGAAGAATTTGTCGGTTTTAAATGAATTAGCACATATGAGTCAA
TATTTATGAGTGGTTTTGTAATTGTATAGGTTCATTACAAGCTAAGAGTTCAAAGCTTGT
CTTATACTCCCTCCGTTCATGTTATAAGATGTTTTGACTTTACAC