Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0213500-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5895364:5897167:1 gene:Os11g0213500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL KERNEL 1 description:Pentatricopeptide repeat protein, Mitochondrial nad7 transcript editing, Seed development (Os11t0213500-01)
Sequence	ATGGCGGCGCCCGTGGCCGGCCGCCTCTCCGGGCTCCTCCGGCGATGCGCGGCGGCCGGG GCGGTCCGGCCGGGAGAGCAGGCGCACGCGAGGGCGGTGGTGGGCGGGTGGCTCCCCGAC GCCACCCTGGAGACCGACCTCGTGCTGATGTACTGCAGGTGCGGCGAGCGTCGGCGCGCA CGCAGGGTGTTCGACGGAATGCGTGCGCCGTCCATGCACGCGTACAACGTGCTCCTCGCG GCGTCGCCTCCCCGCGACGCGATGGAGGTGTTCTCCCGCCTCCTCGCGTCGGGGCTCCGC CCTGACGGTTACTCTGTCCCCGCCGTGGTACGTGCCTGCGCTGAGCTCCCCGACGCGGTG CTTGGCGGGGTGATCCACGGCTTCGCCGTCCGGCTCGGCTTGATGGGGAACGTTGTTGTG GCCGCTGCGCTTCTGGATATGTATGCCAAGGCTGGTTTCCTGGATGATGCGGTGAGGGTG TTCGACGAGATGACGGAGAGGGATGCTGTCGTCTGGAACTGCATGGTTGCAGGGTATGCG AGGGCTGGGAGGGCAGTAGAAACCTTTGAGATTTTCAGCAGAGCGCAGGTTGAGGCGGTG AACATGGTGAATGGTCTGCAGGCTGTGCCCAGCGTGTTGAATATCTGCGCGAAGGAAGGG GAGCTGATGAAGGGTAGGGAAATCCATGGTAGGATGGTGAGGTGCCTTGCATTTGATTCG GATATCGCAGTGGGGAACGCTTTGATCAACATGTATGCAAAGTGCGGCCGGGTCAATGTA TCACAAGCAGTGTTTTCTGGCATGCAGCAGAGGGATGTGGTGAGCTGGTCTACAATGATT CATAGCTACAGCATTCATGGCAAGGGGGAACAGGCATTGAAGGTTTACATGGAAATGTTG TCTGAGGGAGTGAAACCAAATTGGATCACATTCACATCAGTTCTGTCAAGTTGCAGCCAC TCCGGGCTTGTAACCGAGGGTCGGAAGATCTTCGAGTCGATGACTAAGGTTCATGGTGTC CACCCTGCTGCTGAGCACTATGCATGTATGGTTGACCTCTTAGGGCGTGCTGGAGCCATT GAAGAAGCTGTTGGGCTTATAAGGAAGATGCCCATGGAACCTTGTGCTAGCGTGTGGGGA GCTTTGCTCTCTGCATGTGCTATGCATAATAACGTCGATGTTGGAGAGATTGCAGCTTTT AGGCTATTTGAGTTAGAAGAAGGCAGTGCTAGCAATTATGTTACCCTCTGTGGAATTTAT GACGCAGTTGGTCAATCTGATGGTGTTGCAGGGTTGAGATCAAGGATGAGAGAACTCGGC ATGGTGAAGACGCCTGGGTGCAGTCGGATCGATGTGAAGGGAAGAGCTCATGCTTTCTAC CAGGGGAGCATCCCACGTTATTTGAGGAGATGA

Peptide Sequence

PEP ID	Os11t0213500-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5895364:5897167:1 gene:Os11g0213500 transcript:Os11t0213500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL KERNEL 1 description:Pentatricopeptide repeat protein, Mitochondrial nad7 transcript editing, Seed development (Os11t0213500-01)
Sequence	MAAPVAGRLSGLLRRCAAAGAVRPGEQAHARAVVGGWLPDATLETDLVLMYCRCGERRRA RRVFDGMRAPSMHAYNVLLAASPPRDAMEVFSRLLASGLRPDGYSVPAVVRACAELPDAV LGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGYA RAGRAVETFEIFSRAQVEAVNMVNGLQAVPSVLNICAKEGELMKGREIHGRMVRCLAFDS DIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEML SEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGAI EEAVGLIRKMPMEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIY DAVGQSDGVAGLRSRMRELGMVKTPGCSRIDVKGRAHAFYQGSIPRYLRR

Transcript Sequence

Transcript ID	Os11t0213500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5895364:5897167:1 gene:Os11g0213500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL KERNEL 1 description:Pentatricopeptide repeat protein, Mitochondrial nad7 transcript editing, Seed development (Os11t0213500-01)
Sequence	ATGGCGGCGCCCGTGGCCGGCCGCCTCTCCGGGCTCCTCCGGCGATGCGCGGCGGCCGGG GCGGTCCGGCCGGGAGAGCAGGCGCACGCGAGGGCGGTGGTGGGCGGGTGGCTCCCCGAC GCCACCCTGGAGACCGACCTCGTGCTGATGTACTGCAGGTGCGGCGAGCGTCGGCGCGCA CGCAGGGTGTTCGACGGAATGCGTGCGCCGTCCATGCACGCGTACAACGTGCTCCTCGCG GCGTCGCCTCCCCGCGACGCGATGGAGGTGTTCTCCCGCCTCCTCGCGTCGGGGCTCCGC CCTGACGGTTACTCTGTCCCCGCCGTGGTACGTGCCTGCGCTGAGCTCCCCGACGCGGTG CTTGGCGGGGTGATCCACGGCTTCGCCGTCCGGCTCGGCTTGATGGGGAACGTTGTTGTG GCCGCTGCGCTTCTGGATATGTATGCCAAGGCTGGTTTCCTGGATGATGCGGTGAGGGTG TTCGACGAGATGACGGAGAGGGATGCTGTCGTCTGGAACTGCATGGTTGCAGGGTATGCG AGGGCTGGGAGGGCAGTAGAAACCTTTGAGATTTTCAGCAGAGCGCAGGTTGAGGCGGTG AACATGGTGAATGGTCTGCAGGCTGTGCCCAGCGTGTTGAATATCTGCGCGAAGGAAGGG GAGCTGATGAAGGGTAGGGAAATCCATGGTAGGATGGTGAGGTGCCTTGCATTTGATTCG GATATCGCAGTGGGGAACGCTTTGATCAACATGTATGCAAAGTGCGGCCGGGTCAATGTA TCACAAGCAGTGTTTTCTGGCATGCAGCAGAGGGATGTGGTGAGCTGGTCTACAATGATT CATAGCTACAGCATTCATGGCAAGGGGGAACAGGCATTGAAGGTTTACATGGAAATGTTG TCTGAGGGAGTGAAACCAAATTGGATCACATTCACATCAGTTCTGTCAAGTTGCAGCCAC TCCGGGCTTGTAACCGAGGGTCGGAAGATCTTCGAGTCGATGACTAAGGTTCATGGTGTC CACCCTGCTGCTGAGCACTATGCATGTATGGTTGACCTCTTAGGGCGTGCTGGAGCCATT GAAGAAGCTGTTGGGCTTATAAGGAAGATGCCCATGGAACCTTGTGCTAGCGTGTGGGGA GCTTTGCTCTCTGCATGTGCTATGCATAATAACGTCGATGTTGGAGAGATTGCAGCTTTT AGGCTATTTGAGTTAGAAGAAGGCAGTGCTAGCAATTATGTTACCCTCTGTGGAATTTAT GACGCAGTTGGTCAATCTGATGGTGTTGCAGGGTTGAGATCAAGGATGAGAGAACTCGGC ATGGTGAAGACGCCTGGGTGCAGTCGGATCGATGTGAAGGGAAGAGCTCATGCTTTCTAC CAGGGGAGCATCCCACGTTATTTGAGGAGATGAATGCTTTGGGTATTAGATCAGTTACTA GACGATATGGCAAATTCAGATTCAGAAGATGAGCATGCTGACTTGTACTTTGAGTTAACT CTGCACTGAAGTTCTGATGCTGAAAGTCATGTATTGCTACAATCAATTTTGTTCAAGGAA AAGCATGGATCTTCCTTGATGGCTGCCATGCTACTCATGAACAAAGTTGAATGAAGACCA ACAAAGAATCCTAAGAAATTGGTCAATCTAGATGTCTTGGAAGCTGAAACTTTTCAGGAC CAGTATCTGGAGCAACATCCTGCATCATGGTATGGTGCCAGGATGAGAGCAAGAGGGTGG CTCTTCTGGTCGAAACGACTGGTATCTAGTCTGAGGTGACTGCAATGACAGTAATACATG TGTA