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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0210500-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:5745074:5746657:-1 gene:Os11g0210500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALCOHOL DEHYDROGENASE 2 description:Similar to Alcohol dehydrogenase. (Os11t0210500-01);Similar to Alcohol dehydrogenase. (Os11t0210500-02)
Sequence

GTCTGCATTCTCAGCTGCGGTTTCTCTACCGGTTTTGGTGCAACAGTGAATGTCGCGAAA
CCGAAAAAGGGCCAGACCGTGGCTATTTTCGGTCTTGGAGCTGTTGGTCTTGCTGCTATG
GAAGGTGCCAGGCTGTCTGGAGCATCGAGGATCATTGGTGTGGACCTGAACCCTGCGAAA
TTCGAACAAGCTAAGAAGTTTGGCTGCACTGACTTCGTAAACCCCAAGGACCACAGCAAG
CCAGTGCACGAGGTGCTGATTGAGATGACCAACGGTGGACTCGACAGGGCCGTTGAATGC
ACGGGCAACATCAACGCCATGATATCCTGCTTCGAATGTGTCCATGATGGATGGGGCGTT
GCGGTGCTGGTCGGCGTGCCGACCAAGGATGATGTGTTCAAGACCCACCCGATGAACTTC
CTCAACGAGAAGACGCTCAAGGGGACGTTCTTCGGTAACTACAAGCCGCGCACCGACCTG
CCCAACGTCGTCGAGCTGTACATGAAGAAGGAGCTGGAGCTGGAGAAGTTCATCACGCAC
AGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGATCTCATGCTCAAGGGGGAGAGTCTC
CGCTGCGTCATGAGGATGGATGAGTAG

Peptide Sequence

PEP ID

Os11t0210500-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:5745074:5746657:-1 gene:Os11g0210500 transcript:Os11t0210500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALCOHOL DEHYDROGENASE 2 description:Similar to Alcohol dehydrogenase. (Os11t0210500-01);Similar to Alcohol dehydrogenase. (Os11t0210500-02)
Sequence

VCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAK
FEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGV
AVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITH
SVPFSEINTAFDLMLKGESLRCVMRMDE

Transcript Sequence

Transcript ID

Os11t0210500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:5745074:5746657:-1 gene:Os11g0210500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALCOHOL DEHYDROGENASE 2 description:Similar to Alcohol dehydrogenase. (Os11t0210500-01);Similar to Alcohol dehydrogenase. (Os11t0210500-02)
Sequence

GGTCTGCATTCTCAGCTGCGGTTTCTCTACCGGTTTTGGTGCAACAGTGAATGTCGCGAA
ACCGAAAAAGGGCCAGACCGTGGCTATTTTCGGTCTTGGAGCTGTTGGTCTTGCTGCTAT
GGAAGGTGCCAGGCTGTCTGGAGCATCGAGGATCATTGGTGTGGACCTGAACCCTGCGAA
ATTCGAACAAGCTAAGAAGTTTGGCTGCACTGACTTCGTAAACCCCAAGGACCACAGCAA
GCCAGTGCACGAGGTGCTGATTGAGATGACCAACGGTGGACTCGACAGGGCCGTTGAATG
CACGGGCAACATCAACGCCATGATATCCTGCTTCGAATGTGTCCATGATGGATGGGGCGT
TGCGGTGCTGGTCGGCGTGCCGACCAAGGATGATGTGTTCAAGACCCACCCGATGAACTT
CCTCAACGAGAAGACGCTCAAGGGGACGTTCTTCGGTAACTACAAGCCGCGCACCGACCT
GCCCAACGTCGTCGAGCTGTACATGAAGAAGGAGCTGGAGCTGGAGAAGTTCATCACGCA
CAGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGATCTCATGCTCAAGGGGGAGAGTCT
CCGCTGCGTCATGAGGATGGATGAGTAGAGATGATGATGATCTATCTCTCTCTCTCTCTC
TCTTGCAGTTTCAGTGCATACAAGAAACCAAAAATGAAAGCAAAAAATGGATGAGAAGTT
TGAGGTTTTCCATTTAAGTTTAATAATGGTCGTGAGACAGGGCTTGTGTGGAGTCAGCTC
TGTTTACTCCCTCCTTTCATGGCTTGATCTTGTTTATTGTCAGCATTGTGGCTTAGCAGA
TTTTCACCAGTTTTACCCTGTAAATTAGTACCATTCTGAAATCGTAATAAACTACTAGCA
GTGTGAGGTACT