Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0209200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5615461:5618397:-1 gene:Os11g0209200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 592, F-box family-4 description:Similar to Ribosomal RNA apurinic site specific lyase. (Os11t0209200-01)
Sequence	ATGCCTCCTAGGCGAAGGGGCTCGAGAGGCGAGGAGATGGCGGAGGCCAGCAAGGAGGGC GGGATCAACGCCCTCCCCGACGAGCTCCTCCAGCACGTCCTGTCCTTGCTGTCAGCCGAT GAGGCCGTCAAGACCTGCGTCCTGTCCCGGCGATGGCGCCACCTCTGGAGATCCACGGAC GTCCTGCGCCTTGATGCTGATAAGGAGAGATGGAAGAGCTCCAAGCGGTTCAAGAAGTTT GTCAACCATCTAGTGCTCTTCCGGGGCTGCTCGCCTCTACGCGAGTTTGATTTGGAATTC AGTTCATGTCGAGAGAAGGATGAAAAGGGTGAAGACAGTGACGAGGATGAATCAGACGAT GACAGAGGTGAGGATGAATCAGATGAAGACAGTGATGGCGATGAATCAGATGAACACAGT GACGACGGTGAATCAGATGACGACAGTGACGAGGACGAAGACAGTAATCCATTCCAATGT GTCATGATGTGGGTCATGTATGCTCTAATATGCCAAGTTCAGGTGCTCAAAATCCACAAC TTCAATGAAAGATACATTGAAATAGATGGCGGCATGCCTCTCGTCTCACAGCACTTGACT AAGATAGAACTTTCTGGTATAGTGTTAAAGGATTGTTTTCTTAACTTCTCAAGCTGTCCC GCATTGAAAGAGCTATATTTCACCAAGAATTGCTGCTTTGACTCTGTCAAGAAGATCTTC TCCCAGTCAATGCAATGCCTTCGGATCTTCTGTTGTCAATTCAGTGAATATCACCGCACA CTCATTTATGCACCAAGCCTCATTAGGCTCTTTCTTGAAGGTTTTTGGGGCAGAACTCCT TTTCTGGAAAGAATGCCCTCATTAGTTGAAGCATCTGTCAGACCCCACCAGGATTGTGAT GACTGGTGTAGTAATACTTACACTGGTAATTGTGAAGATGAAGACTGTGATGGTTGTCAT GGTATGATAGATAAGATCGGCAACAGTTCCAATTGTGTGCTCCTTGGAGGTCTATCAGAA GCTAAGAGTTTGAAGTTGATAGCTGGACCTGAAATAATTATTTTTGGAAGTGATTTGAGA TGGTGCCCTATGTTTAGCAAGCTGAAGAATTTGTTACTCAATGAGTGGTGTCTTCTGTCT AATTTCTGGGCACTAGCCTGTATTCTTGAACACTCACCAGTTCTACGGAAGCTCACTCTT CAAATTTCCAAGGAAGCTAAATCTATGATGCAAACAGAAGAGAATGACAATCCATTGCGG AAACCAGCTGCAATATCTGAACACCTTAAGGTAGTGAAAGTCCACTGTAAAGAAGTTGAT GAGGTGGTTTACAAAATTGGGAAGTGGTTGAGTACATTGGACATAAAAGTTCTTATCAAA CGGAGGAATCAATCACCAAAACGTTTCTGTTCAAGTAAGGTCTAA

Peptide Sequence

PEP ID	Os11t0209200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5615461:5618397:-1 gene:Os11g0209200 transcript:Os11t0209200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 592, F-box family-4 description:Similar to Ribosomal RNA apurinic site specific lyase. (Os11t0209200-01)
Sequence	MPPRRRGSRGEEMAEASKEGGINALPDELLQHVLSLLSADEAVKTCVLSRRWRHLWRSTD VLRLDADKERWKSSKRFKKFVNHLVLFRGCSPLREFDLEFSSCREKDEKGEDSDEDESDD DRGEDESDEDSDGDESDEHSDDGESDDDSDEDEDSNPFQCVMMWVMYALICQVQVLKIHN FNERYIEIDGGMPLVSQHLTKIELSGIVLKDCFLNFSSCPALKELYFTKNCCFDSVKKIF SQSMQCLRIFCCQFSEYHRTLIYAPSLIRLFLEGFWGRTPFLERMPSLVEASVRPHQDCD DWCSNTYTGNCEDEDCDGCHGMIDKIGNSSNCVLLGGLSEAKSLKLIAGPEIIIFGSDLR WCPMFSKLKNLLLNEWCLLSNFWALACILEHSPVLRKLTLQISKEAKSMMQTEENDNPLR KPAAISEHLKVVKVHCKEVDEVVYKIGKWLSTLDIKVLIKRRNQSPKRFCSSKV

Transcript Sequence

Transcript ID	Os11t0209200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5615461:5618397:-1 gene:Os11g0209200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 592, F-box family-4 description:Similar to Ribosomal RNA apurinic site specific lyase. (Os11t0209200-01)
Sequence	ACCCCGACTCCCCGAAGCACTAGGCCCTAGAAGCGGGGGGCACGCGGCGCCAGAGCCACC GACTCCGCCGGCGGCGGCCGGATCCGGCGAGCTTGCGGCGCCAGGCTAGGGCTCCTCCTC GCCGTCGTCGTCGACCGGCGGCTAATCCACCAGCGCCTGGGTGATCGGTGAGTCGGCTCT TCGTTTCTTGCCGCGCGGTGCCCTTCGCCCGCCACCTGTTCGACGGAATGCCTCCTAGGC GAAGGGGCTCGAGAGGCGAGGAGATGGCGGAGGCCAGCAAGGAGGGCGGGATCAACGCCC TCCCCGACGAGCTCCTCCAGCACGTCCTGTCCTTGCTGTCAGCCGATGAGGCCGTCAAGA CCTGCGTCCTGTCCCGGCGATGGCGCCACCTCTGGAGATCCACGGACGTCCTGCGCCTTG ATGCTGATAAGGAGAGATGGAAGAGCTCCAAGCGGTTCAAGAAGTTTGTCAACCATCTAG TGCTCTTCCGGGGCTGCTCGCCTCTACGCGAGTTTGATTTGGAATTCAGTTCATGTCGAG AGAAGGATGAAAAGGGTGAAGACAGTGACGAGGATGAATCAGACGATGACAGAGGTGAGG ATGAATCAGATGAAGACAGTGATGGCGATGAATCAGATGAACACAGTGACGACGGTGAAT CAGATGACGACAGTGACGAGGACGAAGACAGTAATCCATTCCAATGTGTCATGATGTGGG TCATGTATGCTCTAATATGCCAAGTTCAGGTGCTCAAAATCCACAACTTCAATGAAAGAT ACATTGAAATAGATGGCGGCATGCCTCTCGTCTCACAGCACTTGACTAAGATAGAACTTT CTGGTATAGTGTTAAAGGATTGTTTTCTTAACTTCTCAAGCTGTCCCGCATTGAAAGAGC TATATTTCACCAAGAATTGCTGCTTTGACTCTGTCAAGAAGATCTTCTCCCAGTCAATGC AATGCCTTCGGATCTTCTGTTGTCAATTCAGTGAATATCACCGCACACTCATTTATGCAC CAAGCCTCATTAGGCTCTTTCTTGAAGGTTTTTGGGGCAGAACTCCTTTTCTGGAAAGAA TGCCCTCATTAGTTGAAGCATCTGTCAGACCCCACCAGGATTGTGATGACTGGTGTAGTA ATACTTACACTGGTAATTGTGAAGATGAAGACTGTGATGGTTGTCATGGTATGATAGATA AGATCGGCAACAGTTCCAATTGTGTGCTCCTTGGAGGTCTATCAGAAGCTAAGAGTTTGA AGTTGATAGCTGGACCTGAAATAATTATTTTTGGAAGTGATTTGAGATGGTGCCCTATGT TTAGCAAGCTGAAGAATTTGTTACTCAATGAGTGGTGTCTTCTGTCTAATTTCTGGGCAC TAGCCTGTATTCTTGAACACTCACCAGTTCTACGGAAGCTCACTCTTCAAATTTCCAAGG AAGCTAAATCTATGATGCAAACAGAAGAGAATGACAATCCATTGCGGAAACCAGCTGCAA TATCTGAACACCTTAAGGTAGTGAAAGTCCACTGTAAAGAAGTTGATGAGGTGGTTTACA AAATTGGGAAGTGGTTGAGTACATTGGACATAAAAGTTCTTATCAAACGGAGGAATCAAT CACCAAAACGTTTCTGTTCAAGTAAGGTCTAAAAACTGGATTGTCCATGGATCTACAGGT CTAAAATGGTTTCACCGCGTTGGTGCTTACTGCTTAATTTGCTGTGACAACTGAGAAGGT TGCCATTTTCTGTCTGTAGGTGTCATATGTCAGTTCCAGTCATATTGACAGTTGGAAATA TAAGTCAGAATTTGTAATTGTAGGGCCCTAAAAAAAAGGATTTGGAAGTGCAGGTAATCT ATGGGTTTCTGGTTTGATAAATCTGCTACCTTTAACATGTCTAGCTCTGTGAACATTGCT CCGTCTGAAATGTTTGATAGTATGC