Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0208900-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5592564:5603077:-1 gene:Os11g0208900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine rich repeat containing protein kinase. (Os11t0208900-01)
Sequence	ATGGCTACTACATCATCAGCATGCGTTTCCATTGCTGTACTAGTAGTAGTGCTATCGTCC ACCTCATGCTATTCTTCTCCAAGTCCGACGACCACCGCCAATGGCAGCAGCGACACCGAT CTCGCCGCCCTGCTGGCTTTCAAGTCCCAGCTTACCGACCCCCTCGGCGTTCTGACAAGC AACTGGAGCACCAGCACCTCTTTCTGCCACTGGCTTGGTGTCACCTGCAGCCGCCGCCGC CGACATCGTCGTGTCACTGGACTGTCGCTGCCACACACGCCCCTCCATGGACCCATCACT CCTCTCCTCGGTAACCTCTCGTTTCTCTCCTTCCTCAGGCTCACCGACACCAACCTCACG GCCTCCATCCCAGCTGATCTTGGCAAGCTACGCCGTCTTAGACATCTCTGTCTAGGTGAA AACAGCCTCTCTGGTAGGATTCCTCCTGACCTGGGAAACCTAGCAAGGCTCGAGGTTCTT GAATTAGGCAGCAACCAACTCTCCGGTCAGATACCTCCAGAGTTGTTGCTGCATCTGCAC AATCTTCAGGTGATTTCTCTAGAAGGGAACTCCTTGAGTGGGCAGATCCCGTCTTTTCTA TTCAACAACACGCCTTCCTTGAGGTACCTATCTTTCGGAAACAACAGCCTATCAGGTCCT ATACCGGATGGTGTTGCCTCCCTGTCTCAACTCGAGATTCTAGACATGCAGTACAATCAG CTCTCCAGCCTAGTGCCACAAGCCCTGTACAACATGTCCTGGCTTCGAGTCATGGCGCTG GCAGGCAACGGGAACCTGACCGGACCAATACCAAACAATAATCAGACATTCAGGCTCCCT ATGCTACGATTTATTTCCCTCGCCCGGAACAGAATCGCCGGTCGGTTTCCTGCGGGGCTT GCATCATGCCAGTACTTAAGGGAAATCTATTTATATAGCAATTCTTTCGTGGATGTTCTC CCAACATGGTTAGCTAAATTGTCACGACTTGAAGTAGTTTCACTGGGTGGAAATAAGCTT GTTGGTACAATCCCAGCTGTTCTTAGCAACCTCACCCGCCTCACAGTACTAGAGCTCTCT TTTGGCAACCTTACAGGAAATATTCCACCAGAGATAGGATTACTTCAGAAACTTGTGTAC TTGCTTCTTTCAGCTAATCAGTTGTCTGGCTCGGTACCGCGGACACTGGGGAACATTGCT GCTTTACAGAAGCTCGTTCTACCCCACAACAACCTAGAGGGGAATATGGGCTTCTTGTCA TCTCTTTCAGAATGTAGGCAGCTGGAAGACCTTATCTTGGACCATAATTCTTTCGTAGGT GCCCTTCCAGACCATTTGGGTAATCTCTCGGCACGGTTAATTAGTTTCATTGCAGATCAT AATAAGTTGGCAGGTAGTCTTCCAGAAAAAATGTCCAACTTAAGCAGCCTTGAACTGATA GATCTTGGTTACAACCAACTCACTGGGGCAATTCCAGAATCAATCGCTACGATGGGAAAT CTCGGGTTGCTTGATGTCTCTAACAATCACATTTTAGGCCCTTTGCCAACACAGATTGGC ACGCTTTTGAGTATACAACGACTATTTCTTGAAAGGAACAAAATCTCTGGCTCCATACCA GATAGCATTGGCAATCTTAGCAGGTTAGATTACATTGACTTGTCCAACAACCAGTTAAGT GGAAAGATACCAGCAAGCTTATTCCAACTTCATAACCTTATCCAAATAAATCTTTCCTGT AATTCCATTGTCGGTGCTCTGCCAGCCGACATTGCTGGCCTAAGACAAATCGACCAAATT GATGTTTCTAGTAACTTCTTGAATGGAAGCATCCCAGAATCATTGGGACAGCTCAATATG CTAACCTATCTGATTCTCTCACACAACTCCTTGGAAGGTTCAATTCCTAGCACTCTCCAA AGTCTAACTAGCTTAACATGGTTAGACCTTTCCTCAAACAACCTCTCTGGTTCCATTCCC ATGTTCCTTGAAAATCTTACCGACTTGACTATGCTGAACCTCTCCTTCAATAGGCTCGAA GGCCCAATACCAGAGGGAGGAATTTTCTCTAATAACCTTACGAGACAATCTTTGATTGGG AATGCTGGGTTATGTGGTTCTCCACGTCTTGGATTTTCACCCTGTCTTAAAAAGTCTCAC CCTTATAGCAGACCTCTTCTAAAACTTCTACTCCCAGCCATCTTGGTAGCTTCTGGCATC CTTGCTGTTTTCTTATACTTAATGTTTGAAAAGAAACACAAGAAGGCCAAAGCTTATGGT GATATGGCAGATGTCATAGGCCCTCAGTTACTCACCTATCATGATCTCGTCCTTGCCACT GAGAATTTCAGTGATGATAACCTGTTGGGATCTGGAGGATTTGGAAAAGTATTTAAAGGC CAACTTGGCAGTGGTTTGGTTGTTGCTATAAAAGTTCTAGACATGAAGCTGGAGCATTCG ATCAGAATCTTTGATGCTGAGTGTCATATACTACGCATGGTGCGACACCGCAACCTGATA AAGATACTAAATACCTGTTCGAACATGGACTTCAAAGCATTGGTTCTTGAGTTCATGCCA AATGGCAGCTTAGAGAAACTGCTACACTGCTCCGAGGGCACAATGCACCTGGGATTCCTC GAGAGGCTGAATATCATGCTCGATGTGTCCATGGCAGTTCATTATCTGCACCATGAGCAC TACGAGGTGGTTTTGCACTGTGATTTGAAGCCTAGTAATGTGCTATTTGACAATGACATG ACAGCACATGTGGCGGATTTTGGCATTGCGAAGTTGCTATTAGGCGATGACAACTCGATG ATTGTTGCTAGCATGTCTGGAACGGTTGGTTACATGGCACCAGAATATGGCTCTATGGGA AAAGCATCACGTAAGAGTGATGTGTTCAGCTATGGGATCATGCTTCTTGAAGTTTTCACT GGAAGGAGACCAATGGATGCTATGTTTCTTGGAGACCTAATAAGCCTTAGAGAGTGGGTT CATCAGGTATTTCCTACAAAACTTGTCCATGTGGTGGATAGGCATCTACTGCAAGGCTCC TCGTCTTCCAGCTGCAACTTGGATGAGAGCTTTCTTGTGCCAATATTTGAGCTGGGTTTG ATCTGCTCTAGTGATTTGCCAAATGAAAGGATGACAATGAGTGATGTGGTCGTCAGACTG AAGAAGATCAAGGTGGCATACACCGAATGGATATCTGCGACATAG

Peptide Sequence

PEP ID	Os11t0208900-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5592564:5603077:-1 gene:Os11g0208900 transcript:Os11t0208900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine rich repeat containing protein kinase. (Os11t0208900-01)
Sequence	MATTSSACVSIAVLVVVLSSTSCYSSPSPTTTANGSSDTDLAALLAFKSQLTDPLGVLTS NWSTSTSFCHWLGVTCSRRRRHRRVTGLSLPHTPLHGPITPLLGNLSFLSFLRLTDTNLT ASIPADLGKLRRLRHLCLGENSLSGRIPPDLGNLARLEVLELGSNQLSGQIPPELLLHLH NLQVISLEGNSLSGQIPSFLFNNTPSLRYLSFGNNSLSGPIPDGVASLSQLEILDMQYNQ LSSLVPQALYNMSWLRVMALAGNGNLTGPIPNNNQTFRLPMLRFISLARNRIAGRFPAGL ASCQYLREIYLYSNSFVDVLPTWLAKLSRLEVVSLGGNKLVGTIPAVLSNLTRLTVLELS FGNLTGNIPPEIGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLS SLSECRQLEDLILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLELI DLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQRLFLERNKISGSIP DSIGNLSRLDYIDLSNNQLSGKIPASLFQLHNLIQINLSCNSIVGALPADIAGLRQIDQI DVSSNFLNGSIPESLGQLNMLTYLILSHNSLEGSIPSTLQSLTSLTWLDLSSNNLSGSIP MFLENLTDLTMLNLSFNRLEGPIPEGGIFSNNLTRQSLIGNAGLCGSPRLGFSPCLKKSH PYSRPLLKLLLPAILVASGILAVFLYLMFEKKHKKAKAYGDMADVIGPQLLTYHDLVLAT ENFSDDNLLGSGGFGKVFKGQLGSGLVVAIKVLDMKLEHSIRIFDAECHILRMVRHRNLI KILNTCSNMDFKALVLEFMPNGSLEKLLHCSEGTMHLGFLERLNIMLDVSMAVHYLHHEH YEVVLHCDLKPSNVLFDNDMTAHVADFGIAKLLLGDDNSMIVASMSGTVGYMAPEYGSMG KASRKSDVFSYGIMLLEVFTGRRPMDAMFLGDLISLREWVHQVFPTKLVHVVDRHLLQGS SSSSCNLDESFLVPIFELGLICSSDLPNERMTMSDVVVRLKKIKVAYTEWISAT

Transcript Sequence

Transcript ID	Os11t0208900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5592564:5603077:-1 gene:Os11g0208900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine rich repeat containing protein kinase. (Os11t0208900-01)
Sequence	AGTATCTGCTTGCACGAGAACATGTACAGCCACACGATCGAGCAGAGCTCAAATGGCTAC TACATCATCAGCATGCGTTTCCATTGCTGTACTAGTAGTAGTGCTATCGTCCACCTCATG CTATTCTTCTCCAAGTCCGACGACCACCGCCAATGGCAGCAGCGACACCGATCTCGCCGC CCTGCTGGCTTTCAAGTCCCAGCTTACCGACCCCCTCGGCGTTCTGACAAGCAACTGGAG CACCAGCACCTCTTTCTGCCACTGGCTTGGTGTCACCTGCAGCCGCCGCCGCCGACATCG TCGTGTCACTGGACTGTCGCTGCCACACACGCCCCTCCATGGACCCATCACTCCTCTCCT CGGTAACCTCTCGTTTCTCTCCTTCCTCAGGCTCACCGACACCAACCTCACGGCCTCCAT CCCAGCTGATCTTGGCAAGCTACGCCGTCTTAGACATCTCTGTCTAGGTGAAAACAGCCT CTCTGGTAGGATTCCTCCTGACCTGGGAAACCTAGCAAGGCTCGAGGTTCTTGAATTAGG CAGCAACCAACTCTCCGGTCAGATACCTCCAGAGTTGTTGCTGCATCTGCACAATCTTCA GGTGATTTCTCTAGAAGGGAACTCCTTGAGTGGGCAGATCCCGTCTTTTCTATTCAACAA CACGCCTTCCTTGAGGTACCTATCTTTCGGAAACAACAGCCTATCAGGTCCTATACCGGA TGGTGTTGCCTCCCTGTCTCAACTCGAGATTCTAGACATGCAGTACAATCAGCTCTCCAG CCTAGTGCCACAAGCCCTGTACAACATGTCCTGGCTTCGAGTCATGGCGCTGGCAGGCAA CGGGAACCTGACCGGACCAATACCAAACAATAATCAGACATTCAGGCTCCCTATGCTACG ATTTATTTCCCTCGCCCGGAACAGAATCGCCGGTCGGTTTCCTGCGGGGCTTGCATCATG CCAGTACTTAAGGGAAATCTATTTATATAGCAATTCTTTCGTGGATGTTCTCCCAACATG GTTAGCTAAATTGTCACGACTTGAAGTAGTTTCACTGGGTGGAAATAAGCTTGTTGGTAC AATCCCAGCTGTTCTTAGCAACCTCACCCGCCTCACAGTACTAGAGCTCTCTTTTGGCAA CCTTACAGGAAATATTCCACCAGAGATAGGATTACTTCAGAAACTTGTGTACTTGCTTCT TTCAGCTAATCAGTTGTCTGGCTCGGTACCGCGGACACTGGGGAACATTGCTGCTTTACA GAAGCTCGTTCTACCCCACAACAACCTAGAGGGGAATATGGGCTTCTTGTCATCTCTTTC AGAATGTAGGCAGCTGGAAGACCTTATCTTGGACCATAATTCTTTCGTAGGTGCCCTTCC AGACCATTTGGGTAATCTCTCGGCACGGTTAATTAGTTTCATTGCAGATCATAATAAGTT GGCAGGTAGTCTTCCAGAAAAAATGTCCAACTTAAGCAGCCTTGAACTGATAGATCTTGG TTACAACCAACTCACTGGGGCAATTCCAGAATCAATCGCTACGATGGGAAATCTCGGGTT GCTTGATGTCTCTAACAATCACATTTTAGGCCCTTTGCCAACACAGATTGGCACGCTTTT GAGTATACAACGACTATTTCTTGAAAGGAACAAAATCTCTGGCTCCATACCAGATAGCAT TGGCAATCTTAGCAGGTTAGATTACATTGACTTGTCCAACAACCAGTTAAGTGGAAAGAT ACCAGCAAGCTTATTCCAACTTCATAACCTTATCCAAATAAATCTTTCCTGTAATTCCAT TGTCGGTGCTCTGCCAGCCGACATTGCTGGCCTAAGACAAATCGACCAAATTGATGTTTC TAGTAACTTCTTGAATGGAAGCATCCCAGAATCATTGGGACAGCTCAATATGCTAACCTA TCTGATTCTCTCACACAACTCCTTGGAAGGTTCAATTCCTAGCACTCTCCAAAGTCTAAC TAGCTTAACATGGTTAGACCTTTCCTCAAACAACCTCTCTGGTTCCATTCCCATGTTCCT TGAAAATCTTACCGACTTGACTATGCTGAACCTCTCCTTCAATAGGCTCGAAGGCCCAAT ACCAGAGGGAGGAATTTTCTCTAATAACCTTACGAGACAATCTTTGATTGGGAATGCTGG GTTATGTGGTTCTCCACGTCTTGGATTTTCACCCTGTCTTAAAAAGTCTCACCCTTATAG CAGACCTCTTCTAAAACTTCTACTCCCAGCCATCTTGGTAGCTTCTGGCATCCTTGCTGT TTTCTTATACTTAATGTTTGAAAAGAAACACAAGAAGGCCAAAGCTTATGGTGATATGGC AGATGTCATAGGCCCTCAGTTACTCACCTATCATGATCTCGTCCTTGCCACTGAGAATTT CAGTGATGATAACCTGTTGGGATCTGGAGGATTTGGAAAAGTATTTAAAGGCCAACTTGG CAGTGGTTTGGTTGTTGCTATAAAAGTTCTAGACATGAAGCTGGAGCATTCGATCAGAAT CTTTGATGCTGAGTGTCATATACTACGCATGGTGCGACACCGCAACCTGATAAAGATACT AAATACCTGTTCGAACATGGACTTCAAAGCATTGGTTCTTGAGTTCATGCCAAATGGCAG CTTAGAGAAACTGCTACACTGCTCCGAGGGCACAATGCACCTGGGATTCCTCGAGAGGCT GAATATCATGCTCGATGTGTCCATGGCAGTTCATTATCTGCACCATGAGCACTACGAGGT GGTTTTGCACTGTGATTTGAAGCCTAGTAATGTGCTATTTGACAATGACATGACAGCACA TGTGGCGGATTTTGGCATTGCGAAGTTGCTATTAGGCGATGACAACTCGATGATTGTTGC TAGCATGTCTGGAACGGTTGGTTACATGGCACCAGAATATGGCTCTATGGGAAAAGCATC ACGTAAGAGTGATGTGTTCAGCTATGGGATCATGCTTCTTGAAGTTTTCACTGGAAGGAG ACCAATGGATGCTATGTTTCTTGGAGACCTAATAAGCCTTAGAGAGTGGGTTCATCAGGT ATTTCCTACAAAACTTGTCCATGTGGTGGATAGGCATCTACTGCAAGGCTCCTCGTCTTC CAGCTGCAACTTGGATGAGAGCTTTCTTGTGCCAATATTTGAGCTGGGTTTGATCTGCTC TAGTGATTTGCCAAATGAAAGGATGACAATGAGTGATGTGGTCGTCAGACTGAAGAAGAT CAAGGTGGCATACACCGAATGGATATCTGCGACATAGAATCTGGCTCAGTAAATCGCTCT AGCTTATTATATATGTATGGGTTTCCTTCAAAAAAAAAAACATTATGTGTATGTATCTAC CTTGTTTATTTGTACACTGCAAACGTCATCAACGTCACTATATTATCCACCACTTCTTGT CTTCGTTGCCAAGGATGGCCTTCTCAACTTCTGCTCGCCCACCCATCCTATGCCCGGAGT AGCCCGAGATAACAAGGAGGGTTGCGCCATCAAGGTCGAGCTGACCCCTGCTTCCTGTTT CCGCCTTCAAGAATGACTTTCTCGACTTTTGCCAACCCATTCCTCGTCGGAGCATCCGTT AAAAAGGATGGCCAACAAGATGTGGAGGCAATCCTCGCCTCTTTGATGGCCAGGAAGATA AGAAGAAGACCCCCTCAATAGCGGTGTGGAGGACGGACGAACTCGTTGTCCATCCCACAG GCGTTGGCATGTGGTGGACGGAGAAACTCGCCGGCGTGTCGAGGGTGGAGAGTTGACATT GAACGACAAAAAGTGGCATGGGAAAAAAGGAATTCACACTCCTAGTGGCATAATATAAAA GTGCTACGAATTGAGTGGCATATCCTGAGAGTGCTCTGAATTGGATATTTGGATGTCAAC ATTGCTCTGCATATAACACATCTGGCAAAGTATTTGG