Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0207700-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:5488731:5493004:-1 gene:Os11g0207700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 13 description:Similar to Flavin-binding monooxygenase-like family protein. (Os11t0207700-00)
Sequence	ATGGAGGCTGTGGAGGAGGTGGTCGTTCTCATCGTCGGTGCGGGGCCAGCAGGCCTGGCA ACAGCAGCGTGCCTCGCACAGCGCCATGTGCCCTATGTCATTGTCGAGCGTGAGTCCTGC ACCGCGTCGCTGTGGCGCCACCGTGCCTATGACCGACTCAAGCTGCACCTCGCCAAGGAG TTCTGTGAGCTGCCACACATGGCGTATCCTGTAGGCACGCCAACATACATCCCTAGGGAT ATGTTTGTGGAGTACCTAGATAGCTACACTGACCAGTTTGGGATACGACCAAGGTACCAC ACTGCTATCGAGTCAGCAATATATGATGGAGGTAAGAACCGTTGGGCTGTGCTAGCACGG GACACGGACACTAGTGTTGTGACAAGGCTCACCGCACAGTTCCTTGTCGTGGCCACTGGC GAGAACAGTGCGGCAAGCATTCCACCAGTTCCTGGTCTCACTAGGTTTGAGGGAGAAGCC ATTCACTCGTCGGCTTACAAGTCTGGGAGAGCCTATACCGGGAAGAATGTGCTTGTGGTC GGTGCCGGGAATTCTGGCATGGAGATCGCCTATGATCTTGCCACGCATGGAGCCCACACC TCCATAGTTGTTCGTAGCCCGATACACATCATGACCAAAGAACTAATACGATTTGGGATG ACAGTGGTCCAAAATCTAGGGCTAACAGTGACAACAGCGGATTCTCTTCTTGTGATGGCT GCAAATTTTTATTTTGGAGACTTGTCAAAACATGGTATTACGAGGCCTAAAATTGGTCCT CTTTTACTGAAATCACAAACTGGCCGGTCCGCCGTCATAGATGTAGGGACTGCAAGATTA ATCAAAGGAGGAGTTATCAAAGTGTTCCAAGGAATATCGAAGATAAAAACAAATAGTATT GAATTTCATGGTGGGAAGCAAATTCCTTTTGATGCCATTGTATTTGCAACAGGCTACAAA AGCACAGTAAATACATGGCTAAAGAATGGTGAAAGCATGTTTAAAGATGATGGTTTCCCT AAGAAATTCTTTCCAAATCATTGGAAAGGTGAAAATGGACTATATTGTGCTGGGTTTGCA AGGAGAGGATTGGCCGGCATTGCCATGGATGCTAAGAATATTGCAGATCACATAGTGGCC ACCATGGATCAAGTGTCTTGTTAA

Peptide Sequence

PEP ID	Os11t0207700-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:5488731:5493004:-1 gene:Os11g0207700 transcript:Os11t0207700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 13 description:Similar to Flavin-binding monooxygenase-like family protein. (Os11t0207700-00)
Sequence	MEAVEEVVVLIVGAGPAGLATAACLAQRHVPYVIVERESCTASLWRHRAYDRLKLHLAKE FCELPHMAYPVGTPTYIPRDMFVEYLDSYTDQFGIRPRYHTAIESAIYDGGKNRWAVLAR DTDTSVVTRLTAQFLVVATGENSAASIPPVPGLTRFEGEAIHSSAYKSGRAYTGKNVLVV GAGNSGMEIAYDLATHGAHTSIVVRSPIHIMTKELIRFGMTVVQNLGLTVTTADSLLVMA ANFYFGDLSKHGITRPKIGPLLLKSQTGRSAVIDVGTARLIKGGVIKVFQGISKIKTNSI EFHGGKQIPFDAIVFATGYKSTVNTWLKNGESMFKDDGFPKKFFPNHWKGENGLYCAGFA RRGLAGIAMDAKNIADHIVATMDQVSC

Transcript Sequence

Transcript ID	Os11t0207700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5488731:5493004:-1 gene:Os11g0207700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 13 description:Similar to Flavin-binding monooxygenase-like family protein. (Os11t0207700-00)
Sequence	ATGGAGGCTGTGGAGGAGGTGGTCGTTCTCATCGTCGGTGCGGGGCCAGCAGGCCTGGCA ACAGCAGCGTGCCTCGCACAGCGCCATGTGCCCTATGTCATTGTCGAGCGTGAGTCCTGC ACCGCGTCGCTGTGGCGCCACCGTGCCTATGACCGACTCAAGCTGCACCTCGCCAAGGAG TTCTGTGAGCTGCCACACATGGCGTATCCTGTAGGCACGCCAACATACATCCCTAGGGAT ATGTTTGTGGAGTACCTAGATAGCTACACTGACCAGTTTGGGATACGACCAAGGTACCAC ACTGCTATCGAGTCAGCAATATATGATGGAGGTAAGAACCGTTGGGCTGTGCTAGCACGG GACACGGACACTAGTGTTGTGACAAGGCTCACCGCACAGTTCCTTGTCGTGGCCACTGGC GAGAACAGTGCGGCAAGCATTCCACCAGTTCCTGGTCTCACTAGGTTTGAGGGAGAAGCC ATTCACTCGTCGGCTTACAAGTCTGGGAGAGCCTATACCGGGAAGAATGTGCTTGTGGTC GGTGCCGGGAATTCTGGCATGGAGATCGCCTATGATCTTGCCACGCATGGAGCCCACACC TCCATAGTTGTTCGTAGCCCGATACACATCATGACCAAAGAACTAATACGATTTGGGATG ACAGTGGTCCAAAATCTAGGGCTAACAGTGACAACAGCGGATTCTCTTCTTGTGATGGCT GCAAATTTTTATTTTGGAGACTTGTCAAAACATGGTATTACGAGGCCTAAAATTGGTCCT CTTTTACTGAAATCACAAACTGGCCGGTCCGCCGTCATAGATGTAGGGACTGCAAGATTA ATCAAAGGAGGAGTTATCAAAGTGTTCCAAGGAATATCGAAGATAAAAACAAATAGTATT GAATTTCATGGTGGGAAGCAAATTCCTTTTGATGCCATTGTATTTGCAACAGGCTACAAA AGCACAGTAAATACATGGCTAAAGAATGGTGAAAGCATGTTTAAAGATGATGGTTTCCCT AAGAAATTCTTTCCAAATCATTGGAAAGGTGAAAATGGACTATATTGTGCTGGGTTTGCA AGGAGAGGATTGGCCGGCATTGCCATGGATGCTAAGAATATTGCAGATCACATAGTGGCC ACCATGGATCAAGTGTCTTGTTAAATTATATTATCTTTTATTGTGAATAAGCGTTACATT