Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0207200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5460669:5464646:1 gene:Os11g0207200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAPK kinase kinase alpha description:Similar to MAP3Ka. (Os11t0207200-01)
Sequence	TTCAATAGGGTGCCAGATGCAAGCTATGTGCTTCCAGGCAGAACGCTGGCTATTGATTCT CGGAGACAAAATCTTGCGGTTGAAGAAGGACGCTTTTTCGCAAACAACCAGGGTTTGGAG CATCCCAGGTTGTCTGAAACTTCAGTTTCTCCAAGGAAAGAATCTTACCTTCACAATTTG GATCTTTCAAACGATCGAACTGCGTATTGCCATGGTCGGAAATCAACGGAGATTGTGTTC AGTACAAGAGTGCCAATCTCTCCCCCTGGCTCAAAAGGCCAAATTCCCTGTCCGACCTCC CCTGTGCAATCAAGAGCATTCGGGCAATGCCCAGGATCCCCCACTGCTCGGCAGGATGAT TCACGAAGCTCAAGCTCACCTCACCCTCTTCCTCGTCCTCCGGGCTCCCCATGCTCATCA TCACGTGTCGTCAGTTCACAGTGGAAGAAGGGCAAGTTGTTAGGCAGTGGTACATTTGGG CAAGTATACCAAGGATTTAACAGTGAAGGTGGCCAAATGTGTGCAATTAAAGAGGTCAAG GTTATTTCTGATGATTCTAACTCGAAAGAGTGTCTCAGGCAGCTACATCAGGAAATTGTG CTTCTGAGTCAGTTGTCACATCCAAATATTGTGCAGTACTATGGCAGTGATCTGTCTAGT GAGACGCTTTCAGTCTATCTCGAGTATGTTTCTGGGGGCTCTATCCATAAGTTGCTTCAA GAGTATGGTGCATTTGGGGAGGCAGTCCTTCGGAATTACACAGCACAAATTCTTTCTGGC CTTGCATATTTGCATGGGCGGAATACAGTGCATAGGGATATCAAAGGGGCCAACATACTT GTAGATCCTAATGGTGACATCAAACTTGCTGATTTTGGGATGGCCAAGCATATATCAGCG CACACATCTATCAAGTCCTTCAAAGGAAGCCCTTACTGGATGGCGCCTGAGGTTATTATG AATACCAATGGCTACAGTCTTTCGGTCGATATTTGGAGCCTTGGCTGCACCATTATTGAG ATGGCAACCGCAAGACCTCCTTGGATTCAGTATGAAGGGGTGGCTGCAATATTTAAAATT GGCAACAGCAAAGACATACCCGATATTCCAGATCATCTTTCTTTTGAGGCAAAGAACTTT TTGAAACTTTGCTTGCAGCGTGACCCTGCAGCCCGCCCTACTGCTGCTCAGCTAATGGAG CATCCTTTTGTCAAGGACCTAGTTGCAAACAGAAGCTTCAGGTCTGGCATGACAAGGGAC ACGTTTCCAACTTCCTTTGATGGAAAAGGCGCCATGGTACAGACAAGCAACAGAAGCTTA TCTCCTCTACGAGATCCAGACCTGACGATGAGAAACTTACAAGTACCAACATCTGCCATT CCTTCGATTTCAACTCGCAGGATCTCTGCCATCAACCCATCCAATGTGCGTATGAACATG TCCCTGCCCGTGTCACCTTGCTCTAGCCCATTACGGCAGTACCGGCAGTCGAATCGGAGT TGCATGCCGTCGCCTCCTCATCCAGCCTATTCAGCTGGAGCAGCTAACTACAGCCCTATC AACAATGCACTCTACCCAAAAAGACCAAGCAACCATGTTCCAGATCCATGGCTCGAAATC TCTCAACTGAAAGCACCACCATTTGATTCTCCAAGAAGATTGTAG

Peptide Sequence

PEP ID	Os11t0207200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5460669:5464646:1 gene:Os11g0207200 transcript:Os11t0207200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAPK kinase kinase alpha description:Similar to MAP3Ka. (Os11t0207200-01)
Sequence	FNRVPDASYVLPGRTLAIDSRRQNLAVEEGRFFANNQGLEHPRLSETSVSPRKESYLHNL DLSNDRTAYCHGRKSTEIVFSTRVPISPPGSKGQIPCPTSPVQSRAFGQCPGSPTARQDD SRSSSSPHPLPRPPGSPCSSSRVVSSQWKKGKLLGSGTFGQVYQGFNSEGGQMCAIKEVK VISDDSNSKECLRQLHQEIVLLSQLSHPNIVQYYGSDLSSETLSVYLEYVSGGSIHKLLQ EYGAFGEAVLRNYTAQILSGLAYLHGRNTVHRDIKGANILVDPNGDIKLADFGMAKHISA HTSIKSFKGSPYWMAPEVIMNTNGYSLSVDIWSLGCTIIEMATARPPWIQYEGVAAIFKI GNSKDIPDIPDHLSFEAKNFLKLCLQRDPAARPTAAQLMEHPFVKDLVANRSFRSGMTRD TFPTSFDGKGAMVQTSNRSLSPLRDPDLTMRNLQVPTSAIPSISTRRISAINPSNVRMNM SLPVSPCSSPLRQYRQSNRSCMPSPPHPAYSAGAANYSPINNALYPKRPSNHVPDPWLEI SQLKAPPFDSPRRL

Transcript Sequence

Transcript ID	Os11t0207200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5460669:5464646:1 gene:Os11g0207200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAPK kinase kinase alpha description:Similar to MAP3Ka. (Os11t0207200-01)
Sequence	TTGGCTGGTTAATTAGTTCATCGAGGCGCTAAATCAAATCAAGTTGTTGTTCTTCTCCTT TTTCTCTTTAAATTTTATTGCTGAATTCGGCGTGAAGTTTTCGTTTCTGGTTGCTAGTAA TAATTTTGCGCGCTTGCTTCGGTTCATCTGCCGAATTGTTTCGGTGGGTTTGGTGGGAAA TTGAGTTCGTGGACTTCATGAATCTCATCTGTTTGGAGGAGGGGATCAAGATTTGATTTG CGAGGTTCTTTGCTTCATACTTTTTTTTGGTGTTCTACTTTTTGGGTGGAATTGGAGCTG TACCTCTTGATGCTTATCTGGTTTGTTTTTTTTCCTTTTCATCCAGGTATGCTTGCTAGT GGCGTTGGCTCTTTCGTCCCCTGGAAAGTAGCACCACTTGTGCTCTAATTAACCCAATTA ATTATTTGTTTTTGGGCAAAAATTATTTCGATTCGAGATGGATTCTACTGCCCCGTTGAC TAATTGTCTTCGTCAGGATCTTCTGCTAATTGTTTGATTTTGTAATATCAGTTGATCTTC CTTGATCCGTCTCTTCGCTGTATCATTTGGGAATTTTTCCGGGCTTGCTTTCTTTGGTTC ACTTTTGATTTTAGAAGATATGATTTTTTTAATAAAAAAACCATTTCCGTTTAGTGACAG ATAGTTTATGTGATCAGCTCTTTAAATTAGTGGTTTTTTTGGTGTGTGCTGGCTATTTGT CAAAGATTATGTGGGTTTTTGGGGGCAATTCGAATTGTATGTTTTGATTGAAATAATCAA AGAACATTTTTGGGTCCCCAGTCCCTGTATATAGGAGTCGATGATTGCTTAAGAATAATT GGTGACTTGCTACGAATGTGGGATAGTACGAAGTACATTATTTCTAACCCAATTATTGTT TCGAGATATGGTAGCTTTAGGATGGTGAATTTTGCTGCTGTCAAGTGATTGCTCCATTCA TAACTTTTCATTTGAACTGAAGCTTGTTCATGTCTGATTCAATAGGGTGCCAGATGCAAG CTATGTGCTTCCAGGCAGAACGCTGGCTATTGATTCTCGGAGACAAAATCTTGCGGTTGA AGAAGGACGCTTTTTCGCAAACAACCAGGGTTTGGAGCATCCCAGGTTGTCTGAAACTTC AGTTTCTCCAAGGAAAGAATCTTACCTTCACAATTTGGATCTTTCAAACGATCGAACTGC GTATTGCCATGGTCGGAAATCAACGGAGATTGTGTTCAGTACAAGAGTGCCAATCTCTCC CCCTGGCTCAAAAGGCCAAATTCCCTGTCCGACCTCCCCTGTGCAATCAAGAGCATTCGG GCAATGCCCAGGATCCCCCACTGCTCGGCAGGATGATTCACGAAGCTCAAGCTCACCTCA CCCTCTTCCTCGTCCTCCGGGCTCCCCATGCTCATCATCACGTGTCGTCAGTTCACAGTG GAAGAAGGGCAAGTTGTTAGGCAGTGGTACATTTGGGCAAGTATACCAAGGATTTAACAG TGAAGGTGGCCAAATGTGTGCAATTAAAGAGGTCAAGGTTATTTCTGATGATTCTAACTC GAAAGAGTGTCTCAGGCAGCTACATCAGGAAATTGTGCTTCTGAGTCAGTTGTCACATCC AAATATTGTGCAGTACTATGGCAGTGATCTGTCTAGTGAGACGCTTTCAGTCTATCTCGA GTATGTTTCTGGGGGCTCTATCCATAAGTTGCTTCAAGAGTATGGTGCATTTGGGGAGGC AGTCCTTCGGAATTACACAGCACAAATTCTTTCTGGCCTTGCATATTTGCATGGGCGGAA TACAGTGCATAGGGATATCAAAGGGGCCAACATACTTGTAGATCCTAATGGTGACATCAA ACTTGCTGATTTTGGGATGGCCAAGCATATATCAGCGCACACATCTATCAAGTCCTTCAA AGGAAGCCCTTACTGGATGGCGCCTGAGGTTATTATGAATACCAATGGCTACAGTCTTTC GGTCGATATTTGGAGCCTTGGCTGCACCATTATTGAGATGGCAACCGCAAGACCTCCTTG GATTCAGTATGAAGGGGTGGCTGCAATATTTAAAATTGGCAACAGCAAAGACATACCCGA TATTCCAGATCATCTTTCTTTTGAGGCAAAGAACTTTTTGAAACTTTGCTTGCAGCGTGA CCCTGCAGCCCGCCCTACTGCTGCTCAGCTAATGGAGCATCCTTTTGTCAAGGACCTAGT TGCAAACAGAAGCTTCAGGTCTGGCATGACAAGGGACACGTTTCCAACTTCCTTTGATGG AAAAGGCGCCATGGTACAGACAAGCAACAGAAGCTTATCTCCTCTACGAGATCCAGACCT GACGATGAGAAACTTACAAGTACCAACATCTGCCATTCCTTCGATTTCAACTCGCAGGAT CTCTGCCATCAACCCATCCAATGTGCGTATGAACATGTCCCTGCCCGTGTCACCTTGCTC TAGCCCATTACGGCAGTACCGGCAGTCGAATCGGAGTTGCATGCCGTCGCCTCCTCATCC AGCCTATTCAGCTGGAGCAGCTAACTACAGCCCTATCAACAATGCACTCTACCCAAAAAG ACCAAGCAACCATGTTCCAGATCCATGGCTCGAAATCTCTCAACTGAAAGCACCACCATT TGATTCTCCAAGAAGATTGTAGAAAACCCAAACACACTTTGTATACAGGAATGAAAGATG TTCCATAAGTTAGAAGACCAAAGGGGGTTCCTTTTTTTCTGTTTCACCCTTTCTGTATGT ATCTTTTTCCCCTCAGGATGCAGTTGCATCGCCATTGTACAAATGCACAAAATGAGTTCA GTGAAAAGAAGTAGCATTCCAGATTTC