Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0207100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5419433:5427714:1 gene:Os11g0207100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SEU3A protein. (Os11t0207100-01)
Sequence	ATGGTGCCGTCGGGGCCGCCGAACCCGATGGGTCCTGGGCAGCCGGTTGGCGCGGCCTCG TTGCTCAGGACGAGCTCCAGCCTGCTCAGCGGCGGCCAGCAGGGGATGGGCAGTGGCGGA GGCATGCTTCCTTCGCAGTCGCCCTTCTCGTCCCTCGTGTCGCCGCGCACGCAGTTTGGT GCTAATGGCCTGCTGGGAGGTGGCTCCAATGTTTCCTCCCTGCTCAACCGGCCGTTTGGG AATGGGGGACATATGCTCGGTCCGGGGTCGATGCCAGGTGGTGGTGGGCTTCCAATGAAT ACCCTCCAGCAGCAGAGAGGAGGGCTTGATGGTGCTGGCGATTTGGTTGGCGCGGGAGGT TCTGATTCTCTCTCGTTCCCTTCATCGTCGCAAGTTAGTTTGGGCAATCAGCTGGGTTCA GATAATCTGCATCCACCACCGCAACATCAGCAGCAACAACAACACCTGGATGCTATGCAG GACTTGCAGCACCAGCATCAGCATCAGCAGCAACTGCCAATGTCTTACAACCAACAACAG TTGCCACCGCAACCGCCACAGCAGCCGCAGGCTACAGTGAAGTTGGAGAATGGTGGCAGC ACAGGTGGGGTCAAATTGGAACCGCAGATGGGGCAGCCTGACCAGAATAGCACAGCCCAG ATGATGCGCAATGCTAGCAATGTTAAAATTGAGCCGCCGCAGTTGCAAGCTTTGAGGAGT TTGAGTGCGGTGAAGATGGAGCAGCAGAGTTCAGACCCATCAGCATTCCTGCAACAGCAA CAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCT CAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAGCAACAACAGCAGCAACAA CAACAGATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAACAACAGCAG CAGCAGCAACAGCAGCAGCTACTTCGCCAACAGAGTCTAAACATGAGAACTCCAGGAAAA TCGGCTCCTTATGAGCCAGGAACCTGTGCAAAGAGATTGACTCATTACATGTATCATCAA CAAAACAGGCCACAGGATAACAATATCGAGTACTGGAGAAACTTTGTCAATGAGTATTTT TCTCCAAATGCTAAAAAAAGGTGGTGTGTATCTCTCTATGGAAGTGGTCGTCAAACTACT GGAGTTTTCCCTCAGGATGTATGGCATTGTGAGATATGCAATCGGAAGCCTGGGCGAGGC TTTGAGACCACCGTTGAGGTGTTACCACGATTATGCCAAATTAAATATGCCAGTGGTACA TTGGAAGAATTACTATATGTCGACATGCCACGTGAATCGCAGAATGCCTCTGGTCAGATT GTTTTGGACTATACCAAAGCAATCCAGGAAAGTGTCTTTGAGCAGTTGCGTGTGGTACGC GAAGGACATCTAAGGATAGTTTTTAATCCTGATCTCAAGATCGCTTCTTGGGAGTTTTGT GCAAGGCGTCACGAGGAGCTTATTCCACGTAGATCAATAATCCCACAGGTTAGTCAACTG GGCGCAGTTGTGCAAAAATACCAGAGTGCTGTTCAAAATTCGACAAATTTGTCAACTCAA GACATGCAGAATAATTGCAACTCGTTTGTTGCATGTGCCCGCCAATTGGCTAAAGCACTG GAGGTGCCTTTGGTAAATGATCTGGGATACACAAAACGATATGTGCGCTGCCTTCAGATT GCTGAGGTGGTAAACTGTATGAAAGATTTGATTGATTATAGCAGGCAAAATGGGTCTGGA CCAATTGCTAGTTTGCATAGCTTTCCTCGGAGGACTTCATCAGGAGGGGTAAACCCTCAA CAGTCACAGCAGCAACAGCCTGAAGAACAGCAATCTATCCCGCAGAGTTCAAACCAGAGT GGTCAAAATGCTGCTCCCATGACTGGTGTGCAGGCTTCTGCCTCTGCAAATGCAGATGTG ACATCAAATAATTCTCTCAGCTGTGCACCCTCAACGTCTGCACCTTCACCGTCCGTTGTT GGGCTCCTCCAAGGTTCAATGAACTCTAGACAAGATCATCCAATGAGCAGTGCTAATGGT CCATATACCAGTGGAAACAGTGCTGCAATTCCCAAGGTGAACTCGACAACCTCACTGCAG TCAACTCCATCTACCTCTTTTCCTTCACCAGTGCCAACAACATCCAATAACAACATGATG CCTGCCCCTCAGAACACAAACCAACTCAGCTCCCCAACCGCATCATCAAACCTACCGCCA ATGCAGCCACCTGCTACTCGACCTCAGGAGCCTGATCCAAATGAGTCCCAAAGCTCGGTT CAGAGAATATTGCAAGATTTGATGATGTCACCGCAGATGAATGGTGTTGGCCAGCTTGGG AATGACATGAAAAGACCGAACGGACTTACATCTAGTGTTAACGGAGTTAATTGTTTAGTT GGTAATGCTGTTACAAATAACTCAGGAATGGGAGGAATGGGGTTTGGGGCCATGGGTGGG CTTGGTCCAAATCATGCAGCTAGTGGATTGAGAACTGCAATAGCGAACAATGCGATGGCA ATTAGTGGTAGGATGGGAATGAATCACAGTGCACATGACCTATCACAGTTGGGCCAACTA CAGCAGCAACAGCAACATCAACATCAACATCAACATCAACATCAACAGCAACAGCAGCAG CAGCAGCAGCAGCAACATGACTTAGGAAACCAACTGTTGAGTGGACTTAGAGCAGCAAAC AGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAATAA

Peptide Sequence

PEP ID	Os11t0207100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5419433:5427714:1 gene:Os11g0207100 transcript:Os11t0207100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SEU3A protein. (Os11t0207100-01)
Sequence	MVPSGPPNPMGPGQPVGAASLLRTSSSLLSGGQQGMGSGGGMLPSQSPFSSLVSPRTQFG ANGLLGGGSNVSSLLNRPFGNGGHMLGPGSMPGGGGLPMNTLQQQRGGLDGAGDLVGAGG SDSLSFPSSSQVSLGNQLGSDNLHPPPQHQQQQQHLDAMQDLQHQHQHQQQLPMSYNQQQ LPPQPPQQPQATVKLENGGSTGGVKLEPQMGQPDQNSTAQMMRNASNVKIEPPQLQALRS LSAVKMEQQSSDPSAFLQQQQQQQHLLQLTKQNPQAAAAAQLNLLQQQRILQMQQQQQQQ QQILKNLPLQRNQLQQQQQQQQQQQQLLRQQSLNMRTPGKSAPYEPGTCAKRLTHYMYHQ QNRPQDNNIEYWRNFVNEYFSPNAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRG FETTVEVLPRLCQIKYASGTLEELLYVDMPRESQNASGQIVLDYTKAIQESVFEQLRVVR EGHLRIVFNPDLKIASWEFCARRHEELIPRRSIIPQVSQLGAVVQKYQSAVQNSTNLSTQ DMQNNCNSFVACARQLAKALEVPLVNDLGYTKRYVRCLQIAEVVNCMKDLIDYSRQNGSG PIASLHSFPRRTSSGGVNPQQSQQQQPEEQQSIPQSSNQSGQNAAPMTGVQASASANADV TSNNSLSCAPSTSAPSPSVVGLLQGSMNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQ STPSTSFPSPVPTTSNNNMMPAPQNTNQLSSPTASSNLPPMQPPATRPQEPDPNESQSSV QRILQDLMMSPQMNGVGQLGNDMKRPNGLTSSVNGVNCLVGNAVTNNSGMGGMGFGAMGG LGPNHAASGLRTAIANNAMAISGRMGMNHSAHDLSQLGQLQQQQQHQHQHQHQHQQQQQQ QQQQQHDLGNQLLSGLRAANSFNNLQYDWKPSQ

Transcript Sequence

Transcript ID	Os11t0207100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5419433:5427714:1 gene:Os11g0207100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SEU3A protein. (Os11t0207100-01)
Sequence	GTTTTTGTTTTTGTTTTCTTTTTCTTCTTTCTCTCTCCTCCTCCTCCTCCTCTCTTCCTC TCCGCAGAGGAGAAAACCAAATCCCATCGCGAAGGCGAGAGAGAGAGAGAGAGAGAAGAA AAAAAGCGAGAGGAGTAATAAACTCGCGAGGTTTTATTTTATTTTATTTTATTGTGTAAA TTTGGCCCACGGCGGCGGCGGCGGAGTTGGCGGCGGCGGCGGGGCTAAACCCTAGCCGAA GTGGCGGTGCCGGTGGTGGGCGGCGGCAGCGGCGATTTGGCGGGTGGACGAGCTCCGGAT CGCCGGATTCGTGGCGGGGAGGGGGATGACCGCTTGTTCTTGCTCAATTCCGGTGGATCT TACGGTGGAAGGATGGCGAGCTGAGTGAAGGCGCGCGTGATCTTGCAGCGGTTTGTGCGG GGGAGGTTTGGAGCACTTTGTCATTGCCGGCAAGGATGGTGCCGTCGGGGCCGCCGAACC CGATGGGTCCTGGGCAGCCGGTTGGCGCGGCCTCGTTGCTCAGGACGAGCTCCAGCCTGC TCAGCGGCGGCCAGCAGGGGATGGGCAGTGGCGGAGGCATGCTTCCTTCGCAGTCGCCCT TCTCGTCCCTCGTGTCGCCGCGCACGCAGTTTGGTGCTAATGGCCTGCTGGGAGGTGGCT CCAATGTTTCCTCCCTGCTCAACCGGCCGTTTGGGAATGGGGGACATATGCTCGGTCCGG GGTCGATGCCAGGTGGTGGTGGGCTTCCAATGAATACCCTCCAGCAGCAGAGAGGAGGGC TTGATGGTGCTGGCGATTTGGTTGGCGCGGGAGGTTCTGATTCTCTCTCGTTCCCTTCAT CGTCGCAAGTTAGTTTGGGCAATCAGCTGGGTTCAGATAATCTGCATCCACCACCGCAAC ATCAGCAGCAACAACAACACCTGGATGCTATGCAGGACTTGCAGCACCAGCATCAGCATC AGCAGCAACTGCCAATGTCTTACAACCAACAACAGTTGCCACCGCAACCGCCACAGCAGC CGCAGGCTACAGTGAAGTTGGAGAATGGTGGCAGCACAGGTGGGGTCAAATTGGAACCGC AGATGGGGCAGCCTGACCAGAATAGCACAGCCCAGATGATGCGCAATGCTAGCAATGTTA AAATTGAGCCGCCGCAGTTGCAAGCTTTGAGGAGTTTGAGTGCGGTGAAGATGGAGCAGC AGAGTTCAGACCCATCAGCATTCCTGCAACAGCAACAGCAGCAGCAACATTTGCTGCAGC TGACAAAGCAGAATCCTCAAGCTGCTGCGGCAGCTCAACTGAACCTTTTGCAACAGCAAC GGATATTGCAAATGCAGCAACAACAGCAGCAACAACAACAGATTCTAAAGAATCTGCCTT TGCAGAGAAACCAATTACAACAGCAACAACAGCAGCAGCAGCAACAGCAGCAGCTACTTC GCCAACAGAGTCTAAACATGAGAACTCCAGGAAAATCGGCTCCTTATGAGCCAGGAACCT GTGCAAAGAGATTGACTCATTACATGTATCATCAACAAAACAGGCCACAGGATAACAATA TCGAGTACTGGAGAAACTTTGTCAATGAGTATTTTTCTCCAAATGCTAAAAAAAGGTGGT GTGTATCTCTCTATGGAAGTGGTCGTCAAACTACTGGAGTTTTCCCTCAGGATGTATGGC ATTGTGAGATATGCAATCGGAAGCCTGGGCGAGGCTTTGAGACCACCGTTGAGGTGTTAC CACGATTATGCCAAATTAAATATGCCAGTGGTACATTGGAAGAATTACTATATGTCGACA TGCCACGTGAATCGCAGAATGCCTCTGGTCAGATTGTTTTGGACTATACCAAAGCAATCC AGGAAAGTGTCTTTGAGCAGTTGCGTGTGGTACGCGAAGGACATCTAAGGATAGTTTTTA ATCCTGATCTCAAGATCGCTTCTTGGGAGTTTTGTGCAAGGCGTCACGAGGAGCTTATTC CACGTAGATCAATAATCCCACAGGTTAGTCAACTGGGCGCAGTTGTGCAAAAATACCAGA GTGCTGTTCAAAATTCGACAAATTTGTCAACTCAAGACATGCAGAATAATTGCAACTCGT TTGTTGCATGTGCCCGCCAATTGGCTAAAGCACTGGAGGTGCCTTTGGTAAATGATCTGG GATACACAAAACGATATGTGCGCTGCCTTCAGATTGCTGAGGTGGTAAACTGTATGAAAG ATTTGATTGATTATAGCAGGCAAAATGGGTCTGGACCAATTGCTAGTTTGCATAGCTTTC CTCGGAGGACTTCATCAGGAGGGGTAAACCCTCAACAGTCACAGCAGCAACAGCCTGAAG AACAGCAATCTATCCCGCAGAGTTCAAACCAGAGTGGTCAAAATGCTGCTCCCATGACTG GTGTGCAGGCTTCTGCCTCTGCAAATGCAGATGTGACATCAAATAATTCTCTCAGCTGTG CACCCTCAACGTCTGCACCTTCACCGTCCGTTGTTGGGCTCCTCCAAGGTTCAATGAACT CTAGACAAGATCATCCAATGAGCAGTGCTAATGGTCCATATACCAGTGGAAACAGTGCTG CAATTCCCAAGGTGAACTCGACAACCTCACTGCAGTCAACTCCATCTACCTCTTTTCCTT CACCAGTGCCAACAACATCCAATAACAACATGATGCCTGCCCCTCAGAACACAAACCAAC TCAGCTCCCCAACCGCATCATCAAACCTACCGCCAATGCAGCCACCTGCTACTCGACCTC AGGAGCCTGATCCAAATGAGTCCCAAAGCTCGGTTCAGAGAATATTGCAAGATTTGATGA TGTCACCGCAGATGAATGGTGTTGGCCAGCTTGGGAATGACATGAAAAGACCGAACGGAC TTACATCTAGTGTTAACGGAGTTAATTGTTTAGTTGGTAATGCTGTTACAAATAACTCAG GAATGGGAGGAATGGGGTTTGGGGCCATGGGTGGGCTTGGTCCAAATCATGCAGCTAGTG GATTGAGAACTGCAATAGCGAACAATGCGATGGCAATTAGTGGTAGGATGGGAATGAATC ACAGTGCACATGACCTATCACAGTTGGGCCAACTACAGCAGCAACAGCAACATCAACATC AACATCAACATCAACATCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACATGACTTAG GAAACCAACTGTTGAGTGGACTTAGAGCAGCAAACAGCTTCAATAACCTTCAGTATGACT GGAAACCATCTCAATAAAGATAGAACATTACAAGTTTGATATGACGACGTGGCTGCTCTC ACTGGGTTCATTGCTTATGGAGCACAAGTAACAGTGCCGACACCTCGAACTGTGTCAAAG CATTTGGTCTTTGCAATAATGCTGTCATGGAAAAAGGAATCATTCGCGACAGCAAAGCAT CTGAGCCCTGTCAACTGTATGTTGTAACTGTTCGTTTAGCTGCTTGTGTATTGTGCAACT ATGGCATTTTGCTGCCTGCTTCAGTTGTCTTACTGAAAGATAGAGTTAAAAGGATTAGAG CCTTGCCTTGCATCTGCCACCATCCTTGATGGTACGGTGTTACTCCTTACCCGGAAAAGA AGTTTTCCCTCCCTTTTTTTCCATGTCAGATGACATCCGATATGTAATTTATCATCCCCT CCGCCTTCCACCCTTAGCAAGCATATGTGCTGATATCTTTCTTTGCCTAAGGATTCTCTC TCTTTGTAGCCTTACTTGACTTTGTATAAGCTGCCATAATTTAGTAGTGGAAAAAGTATC AGGAATGTTTTCGT