Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0207000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5399320:5407997:1 gene:Os11g0207000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEUSS description:LIM binding protein domain containing protein. (Os11t0207000-01);Hypothetical conserved gene. (Os11t0207000-02)
Sequence	ATGATGCCGTCGGGGCCGCTCAACCCGATGGGTCCCGGGCAGCCGGTGGGCGCCGCCGCC TCGCTGCTCCGGACGAGCTCAAGCCTGCTTAGTGGTGGTCAGCAGGGGATGGGCAGTGGC GGAGGCATGATTCCTTCGCAGTCGCCCTTCTCATCCCTTGTGTCGCCGCGCACGCAGTTT GGTGCTAATGGCCTGCTGGGAGGTGGCTCCAATGTTTCCTCCCTGCTCAACCGGCCGTTT GGGAATGGTGGACATATGCTCGGTCCGGGGTTGATGCCAGGTGGTGGTGGGATTCCAATG AATACCCTCCAGCAGCAGAGAGGAGGGCTTGATGGTGCTGGCGATTTGGTTGGCGTGGGA GGTTCTGATCCTCTCTCGTTTCCTTCATCGTCGCAAGTTAGTTTGGGCAATCAGCTGGGT TCAGATAATCTGCATCAACCACCGCAACATCAGCAACAACAACAGCAGCTGGATGCTATG CACGACTTGCAGCAGCAGCAGCATCATCAGCAACTGCCAATGTCTTACAACCAACAACAT TTGCCACCGCAACCACCACAGCAGCCACAGGCTACAGTGAAGTTGGAGAATGGTGGCAGC ACAGGTGGGGTCAAATTGGAACCGCAGATGGGGCAGCCTGACCAGAACAGCTCAGCCCAG ATGATGCGCCATGCTAGCAATGTTAAAATTGAGCCTCAGCAGTTGCAAGCTCTAAGAAGT TTGAGTGCGGTGAAGATGGAGCAGCCGACTTCAGACCCATCAGCATTCCTGCAACAGCAA CAGCAGCAGCAACATTTGCTGCAGCTGACAAAGCAGAACCCTCAAGCTGCTGCGGCTGCT CAACTGAACCTTTTGCAACAGCAACGGATATTGCAAATGCAGCAGCAACAGCAGCAACAA CAACAACAGATTCTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAGCAGCTA CTTCGCCAACAGAGTCTAAACATGAGAACTCCAGGAAAGTCGGCCCCTTATGAGCCCGGA ACCTGCGCAAAGAGATTGACCCATTACATGTATCATCAACAGAACAGGCCACAGGATAAC AATATTGAGTACTGGAGAAATTTTGTCAATGAGTATTTTTCTCCAAATGCTAAAAAGAGG TGGTGTGTATCTCTCTATGGAAGTGGTCGCCAAACTACTGGAGTTTTCCCTCAGGATGTA TGGCATTGTGAGATATGCAATCGGAAGCCTGGGCGAGGCTTTGAGACCACAGTTGAGGTG TTACCACGGTTGTGCCAAATCAAATATGCCAGTGGTACATTGGAAGAATTACTATATGTG GACATGCCACGTGAATCGCAGAATGCCTCTGGCCAGATTGTTTTGGACTATACCAAAGCT ATCCAGGAAAGTGTATTCGAGCAATTGCGTGTGGTACGCGAAGGACATCTAAGGATAGTT TTTAATCCAGATCTCAAGATCGCGTCTTGGGAGTTTTGTGCTAGGCGACACGAGGAACTT ATTCCACGGAGATCAATAATACCACAGGTTAGTCAACTGGGCGCAGTTGTGCAAAAATAC CAAAGCGCTGTTCAAAATTCGACAAATCTGTCAACTCAAGACATGCAGAATAATTGCAAC TCGTTTGTTGCATGTGCCCGCCAATTGGCTAAAGCACTGGAGGTGCCATTGGTTAATGAT CTGGGATACACAAAACGATATGTGCGCTGCCTTCAGATTGCAGAGGTGGTAAACTGTATG AAAGATTTAATTGATTACAGCAGACAAAATGGATCTGGACCAATTGCTAGTTTGCATAGC TTTCCTCGGAGGACTTCATCAGGGGTCAGCCCTCACCAGTCACAGCAGCAACAGCCTGAA GAGCAGCAATCTATACCGCAGAGTTCAAACCAAAGCGGTCAAAATGCTGCTCCCATGACC GGTGTGCAGGCTTCTGCCTCTGCAAATGCAGATGTGACATCAAATAATTCTCTCAGCTGT GCACCCTCAACGTCTGCACCTTCACCATCCGTTGTTGGGCTCCTCCAAGGTTCAATGAAC TCTAGACAAGATCATCCAATGAGCAGTGCTAATGGTCCATATACCAGTGGAAACAGTGCT GCAATTCCCAAGGTGAACTCGACAACCTCACTGCAGTCAAATCCATCTACCTCTTTTCCT TCACCCATGCCAACAACATCCAATAACAACATGATGCCTGCCCCTCAGAGCACAAACCAA CTCAGCTCCCCAACCACATCATCAAACCTACCGCCAATGCAGCCACCTGCTACTCGGCCT CAGGAGCCTGAGCCAAATGAGTCCCAAAGCTCGGTTCAGAGAATATTGCAAGATTTGATG ATGTCACCGCAGATGAATGGTATTGGCCAGCTTGGGAATGACATGAAAAGACCGAACGGA CTTACATCTAGTGTTAACGGAGTTAATTGTTTAGTTGGTAATGCTGTTACAAATAACTCA GGAATGGGAGGAATGGGGTTTGGGGCCATGGGTGGGCTAGGTCCAAATCATGCAGCTAGT GGATTGAGAACTGCAATGGTGAACAATGCGATGGCAATCAGTGGTAGGATGGGAATGAAT CACAGTGCACATGACCTATCACAGTTGGGCCAACTACAGCAGCAACAGCAACATCAACAG CAGCAGCAGCAGCAGCAACATGACTTAGGAAACCAACTGTTGAATGGACTTAGAGCAGCA AACAGCTTCAATAACCTTCAGTATGACTGGAAACCATCTCAATAA

Peptide Sequence

PEP ID	Os11t0207000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5399320:5407997:1 gene:Os11g0207000 transcript:Os11t0207000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEUSS description:LIM binding protein domain containing protein. (Os11t0207000-01);Hypothetical conserved gene. (Os11t0207000-02)
Sequence	MMPSGPLNPMGPGQPVGAAASLLRTSSSLLSGGQQGMGSGGGMIPSQSPFSSLVSPRTQF GANGLLGGGSNVSSLLNRPFGNGGHMLGPGLMPGGGGIPMNTLQQQRGGLDGAGDLVGVG GSDPLSFPSSSQVSLGNQLGSDNLHQPPQHQQQQQQLDAMHDLQQQQHHQQLPMSYNQQH LPPQPPQQPQATVKLENGGSTGGVKLEPQMGQPDQNSSAQMMRHASNVKIEPQQLQALRS LSAVKMEQPTSDPSAFLQQQQQQQHLLQLTKQNPQAAAAAQLNLLQQQRILQMQQQQQQQ QQQILKNLPLQRNQLQQQQLLRQQSLNMRTPGKSAPYEPGTCAKRLTHYMYHQQNRPQDN NIEYWRNFVNEYFSPNAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFETTVEV LPRLCQIKYASGTLEELLYVDMPRESQNASGQIVLDYTKAIQESVFEQLRVVREGHLRIV FNPDLKIASWEFCARRHEELIPRRSIIPQVSQLGAVVQKYQSAVQNSTNLSTQDMQNNCN SFVACARQLAKALEVPLVNDLGYTKRYVRCLQIAEVVNCMKDLIDYSRQNGSGPIASLHS FPRRTSSGVSPHQSQQQQPEEQQSIPQSSNQSGQNAAPMTGVQASASANADVTSNNSLSC APSTSAPSPSVVGLLQGSMNSRQDHPMSSANGPYTSGNSAAIPKVNSTTSLQSNPSTSFP SPMPTTSNNNMMPAPQSTNQLSSPTTSSNLPPMQPPATRPQEPEPNESQSSVQRILQDLM MSPQMNGIGQLGNDMKRPNGLTSSVNGVNCLVGNAVTNNSGMGGMGFGAMGGLGPNHAAS GLRTAMVNNAMAISGRMGMNHSAHDLSQLGQLQQQQQHQQQQQQQQHDLGNQLLNGLRAA NSFNNLQYDWKPSQ

Transcript Sequence

Transcript ID	Os11t0207000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5399320:5407997:1 gene:Os11g0207000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEUSS description:LIM binding protein domain containing protein. (Os11t0207000-01);Hypothetical conserved gene. (Os11t0207000-02)
Sequence	GTTTTTTTTTTCGTTTTCTTTTTTCTTCCTCGCTTTCTCTCTCTCTCTCTCCTCCTCTCC CTCTTCTTCTTCTTCTCTGCCAAATCCCATCGCGAAGGCGAGAGAGAGAGAGAGAGAGAA GAAAAAGTGAGGGGATTAACAAACTCGCGAGTTTTTCTTTTTTTTTTTTGTTTATTGTGT GAATTTGGCCCACGTCGGCGGCGGCGGCGGAGGAGCTAAACCCTAGCCGGAGGTGAGGTG GTGGTGGTGGTGGTCGGGAAGTGGCGGCGCCGGTGGTGGGGCGGGGGGGCGATTTGGCGC GCGCGGCCGAGCTCCGGATCGCCGGATTTGTGCGTGAGCGCGTGGAGTTTGTGGCGGTGT GCTCGTGTTGCTGTTGGTGGTGAGGTGTGAGGTGAGGTGGGGTGGTGTGGCTTCTGCTGC TGCTGCTACTGCTGCTGCTGGTGCTTAATTTTGCTCGGGTTCGTGGGGTTGGGAAGCGAG GGATGCGATCTGGGAGGTGTTCGGGAGCTCGGTGTTGCTTAATTCCGGTGCTGGTTTGCG GTGGTGCGCGCGCGGCTTCTTCTCGGGGTGGATTTGGTGGTGGTTTTTTTTGTTGCCCTC GTTGTTGCGGGTGGATTTCGGGGGGAGGGAGAGTTTGAGGGATGACTGCTCGTTCTTGCT CAATTCCGGTGGATCTTACGGTGGAAGGATGGCGAGCTGAGTAAAGGCGCGCGATATCTT GCTGCGGTTTGTGCGGAGCTTCGGAGCACTTTGTCATTGCTGGCAAGGATGATGCCGTCG GGGCCGCTCAACCCGATGGGTCCCGGGCAGCCGGTGGGCGCCGCCGCCTCGCTGCTCCGG ACGAGCTCAAGCCTGCTTAGTGGTGGTCAGCAGGGGATGGGCAGTGGCGGAGGCATGATT CCTTCGCAGTCGCCCTTCTCATCCCTTGTGTCGCCGCGCACGCAGTTTGGTGCTAATGGC CTGCTGGGAGGTGGCTCCAATGTTTCCTCCCTGCTCAACCGGCCGTTTGGGAATGGTGGA CATATGCTCGGTCCGGGGTTGATGCCAGGTGGTGGTGGGATTCCAATGAATACCCTCCAG CAGCAGAGAGGAGGGCTTGATGGTGCTGGCGATTTGGTTGGCGTGGGAGGTTCTGATCCT CTCTCGTTTCCTTCATCGTCGCAAGTTAGTTTGGGCAATCAGCTGGGTTCAGATAATCTG CATCAACCACCGCAACATCAGCAACAACAACAGCAGCTGGATGCTATGCACGACTTGCAG CAGCAGCAGCATCATCAGCAACTGCCAATGTCTTACAACCAACAACATTTGCCACCGCAA CCACCACAGCAGCCACAGGCTACAGTGAAGTTGGAGAATGGTGGCAGCACAGGTGGGGTC AAATTGGAACCGCAGATGGGGCAGCCTGACCAGAACAGCTCAGCCCAGATGATGCGCCAT GCTAGCAATGTTAAAATTGAGCCTCAGCAGTTGCAAGCTCTAAGAAGTTTGAGTGCGGTG AAGATGGAGCAGCCGACTTCAGACCCATCAGCATTCCTGCAACAGCAACAGCAGCAGCAA CATTTGCTGCAGCTGACAAAGCAGAACCCTCAAGCTGCTGCGGCTGCTCAACTGAACCTT TTGCAACAGCAACGGATATTGCAAATGCAGCAGCAACAGCAGCAACAACAACAACAGATT CTAAAGAATCTGCCTTTGCAGAGAAACCAATTACAACAGCAGCAGCTACTTCGCCAACAG AGTCTAAACATGAGAACTCCAGGAAAGTCGGCCCCTTATGAGCCCGGAACCTGCGCAAAG AGATTGACCCATTACATGTATCATCAACAGAACAGGCCACAGGATAACAATATTGAGTAC TGGAGAAATTTTGTCAATGAGTATTTTTCTCCAAATGCTAAAAAGAGGTGGTGTGTATCT CTCTATGGAAGTGGTCGCCAAACTACTGGAGTTTTCCCTCAGGATGTATGGCATTGTGAG ATATGCAATCGGAAGCCTGGGCGAGGCTTTGAGACCACAGTTGAGGTGTTACCACGGTTG TGCCAAATCAAATATGCCAGTGGTACATTGGAAGAATTACTATATGTGGACATGCCACGT GAATCGCAGAATGCCTCTGGCCAGATTGTTTTGGACTATACCAAAGCTATCCAGGAAAGT GTATTCGAGCAATTGCGTGTGGTACGCGAAGGACATCTAAGGATAGTTTTTAATCCAGAT CTCAAGATCGCGTCTTGGGAGTTTTGTGCTAGGCGACACGAGGAACTTATTCCACGGAGA TCAATAATACCACAGGTTAGTCAACTGGGCGCAGTTGTGCAAAAATACCAAAGCGCTGTT CAAAATTCGACAAATCTGTCAACTCAAGACATGCAGAATAATTGCAACTCGTTTGTTGCA TGTGCCCGCCAATTGGCTAAAGCACTGGAGGTGCCATTGGTTAATGATCTGGGATACACA AAACGATATGTGCGCTGCCTTCAGATTGCAGAGGTGGTAAACTGTATGAAAGATTTAATT GATTACAGCAGACAAAATGGATCTGGACCAATTGCTAGTTTGCATAGCTTTCCTCGGAGG ACTTCATCAGGGGTCAGCCCTCACCAGTCACAGCAGCAACAGCCTGAAGAGCAGCAATCT ATACCGCAGAGTTCAAACCAAAGCGGTCAAAATGCTGCTCCCATGACCGGTGTGCAGGCT TCTGCCTCTGCAAATGCAGATGTGACATCAAATAATTCTCTCAGCTGTGCACCCTCAACG TCTGCACCTTCACCATCCGTTGTTGGGCTCCTCCAAGGTTCAATGAACTCTAGACAAGAT CATCCAATGAGCAGTGCTAATGGTCCATATACCAGTGGAAACAGTGCTGCAATTCCCAAG GTGAACTCGACAACCTCACTGCAGTCAAATCCATCTACCTCTTTTCCTTCACCCATGCCA ACAACATCCAATAACAACATGATGCCTGCCCCTCAGAGCACAAACCAACTCAGCTCCCCA ACCACATCATCAAACCTACCGCCAATGCAGCCACCTGCTACTCGGCCTCAGGAGCCTGAG CCAAATGAGTCCCAAAGCTCGGTTCAGAGAATATTGCAAGATTTGATGATGTCACCGCAG ATGAATGGTATTGGCCAGCTTGGGAATGACATGAAAAGACCGAACGGACTTACATCTAGT GTTAACGGAGTTAATTGTTTAGTTGGTAATGCTGTTACAAATAACTCAGGAATGGGAGGA ATGGGGTTTGGGGCCATGGGTGGGCTAGGTCCAAATCATGCAGCTAGTGGATTGAGAACT GCAATGGTGAACAATGCGATGGCAATCAGTGGTAGGATGGGAATGAATCACAGTGCACAT GACCTATCACAGTTGGGCCAACTACAGCAGCAACAGCAACATCAACAGCAGCAGCAGCAG CAGCAACATGACTTAGGAAACCAACTGTTGAATGGACTTAGAGCAGCAAACAGCTTCAAT AACCTTCAGTATGACTGGAAACCATCTCAATAAAGATAGAACATTACAAGTTCGACAACA CGGCTGCTCTCATTGGCCTCATTGCTTATGAAGCATCAGTAAGAGTGCCAACACCTCGAA CTGTGTCAAAGCATTTGGCCTTTGCAATAATGCTGTCATGGAAAAAGGTCATTCGCGACA GCAAGCATCTGAGCCTGTCAACTGTATGTTGTAATTGTTCGTTTAGCTGCTTGTGTGTTG TGCAACTATGGCATTTTGCTGCTTGCTTCAGTTGTCTTACCGAAAGATAGAGTTAAAAGG ATTAGAGCCTTGCCTGCACCTGTTGCTATCCTTTGATGGTACGGTGTTACTTCTTACCCG GAAAAGAAGTTTTACCTCCCTTTTTTTCCATGTCAGATGACATCCGATATGTAATTTATC GTCCCCTCCACCTTCCGCCCTTAGCAAGCATATGTTCTGATATCTTTCTTTGCCTGGGGA TTCTCTCTTTGTAGCCTTACTTGACTTTGTATAAGCTGCCATAATTTAGTAGT