Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0200000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:5027829:5029584:-1 gene:Os11g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase family protein. (Os11t0200000-01)
Sequence	ATGGCCACCGGCGGGAACTCGCTGCCGTCGCCGTCGTGCGCCGATGACAAGAAGCGGCGG GTGTGCTACTACTACGACCCCGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATG GTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGAC ATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCG GAGTACGTCGACCTCCTCCGCGACCTCACCCCGGAGAGCTACTTCAACGACGCCGCGCTT CGGCAGAAGGCGGAGGATGACCACGGCATCGGCGGCGACGACGATTGCCCCGCCTTCGAC CGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGTTCGCCGCGGCGCGCGCGCTT GTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCGTCCGCC TGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTC GGCACCTTCAGGCGAGTCATCTACGTCGACATCGACGCGCACCACGGCGACGGCGTGCAG AACGCCTTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATC ACGCCCCACAAGGACTTCTTCCCGGGCTCCGGCGCCATCAACGAAATCGGCGACGGCGCC GGCGAGCACTACAGCGTGAACGTGCCCCTGGACGCCGGCGTCCGCGACGACGTGTACCAC ACGCTGTTCAAGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTG CTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTGTCGGTG CGGGGCCACGCGGAGTGCGTCAGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCGTC GGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCGCGTGGTGCTACGAGACGGCGGTC GCCGTCGGCAAGGAGAGGAAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAG CTCATGTACAAGAACCAGGGGAACAAGCTCCATTACAAGACGTCGACAGCGACGGCGGCG AGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAG GTCAAGCGCGCGCCGAGCGTGCAGTTCCAGGAGCGACGCGGCGGCGACAATGCCGCCGGA GTTGGGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTG CACCGCCTCTGCTTCCCTGGCCTGACGAAGCGTATCAGGCTCAATGACTGA

Peptide Sequence

PEP ID	Os11t0200000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:5027829:5029584:-1 gene:Os11g0200000 transcript:Os11t0200000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase family protein. (Os11t0200000-01)
Sequence	MATGGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGD MRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYFNDAALRQKAEDDHGIGGDDDCPAFD RLWKYCRGYAGGSFAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELL GTFRRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKDFFPGSGAINEIGDGA GEHYSVNVPLDAGVRDDVYHTLFKPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSV RGHAECVSFLRGFNLPLLLVGGGGYTINHVASAWCYETAVAVGKERKLPDDIEIPSHGYE LMYKNQGNKLHYKTSTATAARKRSSSTEVTKGKVLEHLSQVKRAPSVQFQERRGGDNAAG VGLYYERPPSLEDDEPAQRLHRLCFPGLTKRIRLND

Transcript Sequence

Transcript ID	Os11t0200000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:5027829:5029584:-1 gene:Os11g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase family protein. (Os11t0200000-01)
Sequence	ACACGGTACTTCTCAATTGGTTATCATACTGGTTGTTAAAACTTATCTCGACTAGCTAGT TTGTTTGTTTACGATACGGTTTTCGTTGCCGACTCGGACAGAGACTCATGTGTCCCTTTT GTATATCCATGTGAGATTTCTGCACCATTGCTGCATTCTGTTCGATCTCGATCTTCCAAG AAGGAACTTGGAGCGATGGCCACCGGCGGGAACTCGCTGCCGTCGCCGTCGTGCGCCGAT GACAAGAAGCGGCGGGTGTGCTACTACTACGACCCCGGCATCGCCCACATCAAATTCAGC GACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTAC GGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGC CGCTTCCACTCGCCGGAGTACGTCGACCTCCTCCGCGACCTCACCCCGGAGAGCTACTTC AACGACGCCGCGCTTCGGCAGAAGGCGGAGGATGACCACGGCATCGGCGGCGACGACGAT TGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGTTCGCC GCGGCGCGCGCGCTTGTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATG CACCACGCGTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCC ATCAACGAGCTCCTCGGCACCTTCAGGCGAGTCATCTACGTCGACATCGACGCGCACCAC GGCGACGGCGTGCAGAACGCCTTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCAC CGGTACGGCAAAATCACGCCCCACAAGGACTTCTTCCCGGGCTCCGGCGCCATCAACGAA ATCGGCGACGGCGCCGGCGAGCACTACAGCGTGAACGTGCCCCTGGACGCCGGCGTCCGC GACGACGTGTACCACACGCTGTTCAAGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAG CCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGC ATGGAGCTGTCGGTGCGGGGCCACGCGGAGTGCGTCAGCTTCCTCCGCGGGTTCAACCTG CCGCTGCTCCTCGTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCGCGTGGTGC TACGAGACGGCGGTCGCCGTCGGCAAGGAGAGGAAGCTCCCCGACGACATAGAGATACCC AGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACAAGACGTCG ACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTC GAGCACCTGTCGCAGGTCAAGCGCGCGCCGAGCGTGCAGTTCCAGGAGCGACGCGGCGGC GACAATGCCGCCGGAGTTGGGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAA CCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCTGGCCTGACGAAGCGTATCAGGCTCAAT GACTGACGCCGGCGTCCACGCAGATTAACCCGAATTCGCCGGAGTGCAGCTGCTCTGCTG CTGTCGGTTGGAGTTAAGCCAGTCGGATAGACACGTGGCAGAGATCCTGTTGGGACTGCA GCCTGTTGACTAGTCAATTTTTTTTTGTTAGTGCTTTCCTCTCCTCTGAATAACCGATGA TACGGAGTATTTGACT