Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0199700-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:4993638:5006268:-1 gene:Os11g0199700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VHS and GAT domain protein. (Os11t0199700-01);Similar to Seed protein B32E (Fragment). (Os11t0199700-02)
Sequence	ATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGAT TGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGAT ACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACG CTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATT GAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTT CGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGC AGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCA CCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAA CCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTT CAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGA ATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTG AGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATG GACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGAT GAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCA GGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGG GTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTC TCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCT GCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAG AGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACA GAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCT CATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCT GATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGC GAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAAC CCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGT GAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCA GCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAAC AACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGG AATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAA GATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAA CCAGCCAACAGCCGCAGGACTCGCTGA

Peptide Sequence

PEP ID	Os11t0199700-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:4993638:5006268:-1 gene:Os11g0199700 transcript:Os11t0199700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VHS and GAT domain protein. (Os11t0199700-01);Similar to Seed protein B32E (Fragment). (Os11t0199700-02)
Sequence	MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTLKLLKKRLGNKNSKVQILT LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASG RYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDAAIQASL QSSAPSAPALSLSEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM DLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGVPPGSGPAPAAANVNRGTAPPRPTG VSFSPLLNVHHEDDEPEDEFSVLSRRSARDGTAAQGNLPSAPKSERPYPSPLLPPPPSSK RPVFTEASSVDYLSGDSYKTEKVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVS DDFINPTAAPSFSMPSRPMSESNRPAVNRQESLPDDDFINPTAIPGFSSSSNANKYGDSG EDLPKAPWEAQAPGSLPPPPARYGQRQQYFEQQHGLPSGNNGAGYNGLVSQTEGLSLNQR NTENERGSSVPTASRQTKPEDSLFKDLVDFAKNKPSSPSKPANSRRTR

Transcript Sequence

Transcript ID	Os11t0199700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4993638:5006268:-1 gene:Os11g0199700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VHS and GAT domain protein. (Os11t0199700-01);Similar to Seed protein B32E (Fragment). (Os11t0199700-02)
Sequence	GCGTTCCCTTCTCTTCCTCCTTCCTTCTTTCCTGCTGCCTGCCTAGTCTAGTCTACCACC CTCCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAGCCACCGAAATT CCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCAGGCGCGGCCAG GACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGAATCTTGGGGAG GAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAAATGGCGACGGC CGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAA CATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGATACACTCAAGCT CCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGCT AGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATTGAGCGAGACAT ATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTTCGGGAGAAAAT ATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCA GTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCACCTCGTGAGGA GAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATA TCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGC CCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGT GTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTGAGGGAGGAGGT CATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAG CAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGATGAACTGCAGCG TGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCC TGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTC CCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTCTCTGTTCTTTC CCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCTGCTCCAAAAAG TGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTT CACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATC AGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCAAAAAC AGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCAT AAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCG TCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTAT CCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCC AAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGG CCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAACAACGGTGCCGG GTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAA TGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTT CAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAG CCGCAGGACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTTGCCAAGCTATT TGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAAGAGTTTCAGTC TGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTATTGTGCATTCGACAG TTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTA GTCAGGATGTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCT CCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTG CAATTTGAAGTTGGTGTAACTTTACTGTTTTTTTCAGTGTGGAGAAACTGTAACATGGCC TTTG