Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0198200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:4923859:4925639:-1 gene:Os11g0198200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0198200-01)
Sequence

GCAAGATGCCTAAGGCCTGGTGGTGCTCGCCGGCGATGCCAGCTGCTCGACGGCGACACC
GCCGCCTTTTGCGCCTCGCTGGTGGACGGCCTCGCGCAGCTGGAGAGCACGCTGCTTCGT
GAGGAGGACGACGGCGATGGCGGCGGCGGCGGCGGTGGGGCGGTGTCGATGAGGTGGTGC
GCCGACGCCATGAGGCTGGTGAAGCGGATGCAGCGGGAGCTTCTGGTCATGTTCAAGAAG
GCCGACGTGCCGGTGGGCAGCGCCGTCTCCTACGGCGGCGGCGGCGGAGGCGGCGACGGC
GGCGGGTGCTGGTTCGAGCACTACATGCAGGAGACGGCGGCGCTGCTCGACTTCTGCAAC
GCGTTCAAGTCCGCCGTGTCGCGGCTGCACCGCTACTGCATGGTCGTCGACTTCGCCGCG
CAGGTCGGCTGCGCCGGCGGCTGGTGGCTGGAGGAGGAGCCGGGCGGCGACGACGCGGGC
GCCATCCGCCACAGGCTGTCCGACGTGAGGGCGGCGGTGAGCGAGGCGGAGCGGCTAGGG
AGGAAGATCATGTCTAGCTCCAGCGGCGGCGGCGGCGCCGGGGACGACGACGCCGGCGGC
ATGGTGGTCGTCATGCTCGTCGCCAAGATCACCATGGCCGTCGTGTCGATGTTCGTGCTC
CAGGCCCTCACCTCACCCATCGTCCCCCTCGCCGCCGACGTCGACGACGGCCACTGCACC
CTTGGCCGCGCCGCCGCCGTCCCGGTCCCCGAGCTCCAGCCATGGCGAGAATCCCTCTCC
GTGATCACCGACCGGTTCCCGAGGCGGCCGGGCGTCGCCGAGCACGAGAGGGTGGCCATG
GTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGAGACCAAAAATGGC
AAACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATCAGGTGAGCTCAGG
GAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGAGGTGATCAAGGGC
AGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGGCTGA

Peptide Sequence

PEP ID

Os11t0198200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:4923859:4925639:-1 gene:Os11g0198200 transcript:Os11t0198200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0198200-01)
Sequence

ARCLRPGGARRRCQLLDGDTAAFCASLVDGLAQLESTLLREEDDGDGGGGGGGAVSMRWC
ADAMRLVKRMQRELLVMFKKADVPVGSAVSYGGGGGGGDGGGCWFEHYMQETAALLDFCN
AFKSAVSRLHRYCMVVDFAAQVGCAGGWWLEEEPGGDDAGAIRHRLSDVRAAVSEAERLG
RKIMSSSSGGGGAGDDDAGGMVVVMLVAKITMAVVSMFVLQALTSPIVPLAADVDDGHCT
LGRAAAVPVPELQPWRESLSVITDRFPRRPGVAEHERVAMVVKSMMINTKMEGEEETKNG
KQEQEDDHVELLRTRSGELREGVEMFDCVLDEVFDEVIKGRNEMLGIFRDKALTLG

Transcript Sequence

Transcript ID

Os11t0198200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:4923859:4925639:-1 gene:Os11g0198200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0198200-01)
Sequence

ATCCAAATCAAAGACCTGGCATAGCTAAAAGCCCCAAAGGATGGTTGGTTGGTTGGTTGG
TTGGTGAGTTGTCTCCAATCTCCAAACTCCAAGAACAAGAATGCCAAATCAAAAGAGCAC
AAGTGCTAATTAAGCAAGATGCCTAAGGCCTGGTGGTGCTCGCCGGCGATGCCAGCTGCT
CGACGGCGACACCGCCGCCTTTTGCGCCTCGCTGGTGGACGGCCTCGCGCAGCTGGAGAG
CACGCTGCTTCGTGAGGAGGACGACGGCGATGGCGGCGGCGGCGGCGGTGGGGCGGTGTC
GATGAGGTGGTGCGCCGACGCCATGAGGCTGGTGAAGCGGATGCAGCGGGAGCTTCTGGT
CATGTTCAAGAAGGCCGACGTGCCGGTGGGCAGCGCCGTCTCCTACGGCGGCGGCGGCGG
AGGCGGCGACGGCGGCGGGTGCTGGTTCGAGCACTACATGCAGGAGACGGCGGCGCTGCT
CGACTTCTGCAACGCGTTCAAGTCCGCCGTGTCGCGGCTGCACCGCTACTGCATGGTCGT
CGACTTCGCCGCGCAGGTCGGCTGCGCCGGCGGCTGGTGGCTGGAGGAGGAGCCGGGCGG
CGACGACGCGGGCGCCATCCGCCACAGGCTGTCCGACGTGAGGGCGGCGGTGAGCGAGGC
GGAGCGGCTAGGGAGGAAGATCATGTCTAGCTCCAGCGGCGGCGGCGGCGCCGGGGACGA
CGACGCCGGCGGCATGGTGGTCGTCATGCTCGTCGCCAAGATCACCATGGCCGTCGTGTC
GATGTTCGTGCTCCAGGCCCTCACCTCACCCATCGTCCCCCTCGCCGCCGACGTCGACGA
CGGCCACTGCACCCTTGGCCGCGCCGCCGCCGTCCCGGTCCCCGAGCTCCAGCCATGGCG
AGAATCCCTCTCCGTGATCACCGACCGGTTCCCGAGGCGGCCGGGCGTCGCCGAGCACGA
GAGGGTGGCCATGGTGGTGAAGTCCATGATGATCAACACCAAGATGGAAGGAGAAGAAGA
GACCAAAAATGGCAAACAAGAACAAGAAGATGACCATGTTGAGCTTCTAAGAACAAGATC
AGGTGAGCTCAGGGAAGGTGTGGAGATGTTTGATTGTGTTTTGGATGAAGTGTTTGATGA
GGTGATCAAGGGCAGGAATGAGATGCTTGGCATCTTCAGAGATAAGGCCCTCACACTGGG
CTGAATTTTTAGATGTTAGCTAATCTCTGAAAAGTTAATTGACCTTGAGCAATCTGGAAA
CCAGCAGGGTATGTATGTAACCTGGGGTGGATGCTAATTTGACTGATCAATTTGAGTTGT
TTTGTTGAGGGTTTAGAGCTTCTTGCAATGTGTGAGTATGTGTTTATGAAGGTGTTTAAT
TATATTTGGTTTCCTTTTATACTTTAATTTCTCCTTTGGTTTGTAACTTGTTTCAGTGTG
ACATACTGATCAATAAAGCATCTGAAGTTT