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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0194800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:4731977:4734085:1 gene:Os11g0194800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6). (Os11t0194800-01)
Sequence

ATGATCATACCAGTGCGCTGCTTCACCTGCGGCAAGGTGATCGGCAACAAGTGGGATCTC
TACCTCGACCTCCTCCAGGCAGACTACACCGAGGGGGATGCTCTGGATGCTTTGGGCTTA
GTCCGTTACTGCTGTAGGCGAATGCTGATGACCCATGTTGACCTCATTGAGAAGCTGCTC
AACTACAACACTCTGGAGAAGACTGAGACCACTGCTGGCAATTAG

Peptide Sequence

PEP ID

Os11t0194800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:4731977:4734085:1 gene:Os11g0194800 transcript:Os11t0194800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6). (Os11t0194800-01)
Sequence

MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLEKTETTAGN

Transcript Sequence

Transcript ID

Os11t0194800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:4731977:4734085:1 gene:Os11g0194800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6). (Os11t0194800-01)
Sequence

AATCCTTCCCCCGAACCCCCAATCCCGGCGGCGGCGGCGAAGATGATCATACCAGTGCGC
TGCTTCACCTGCGGCAAGGTGATCGGCAACAAGTGGGATCTCTACCTCGACCTCCTCCAG
GCAGACTACACCGAGGGGGATGCTCTGGATGCTTTGGGCTTAGTCCGTTACTGCTGTAGG
CGAATGCTGATGACCCATGTTGACCTCATTGAGAAGCTGCTCAACTACAACACTCTGGAG
AAGACTGAGACCACTGCTGGCAATTAGATGAACCTCGCATACTCCACCGCTTCATTGCAC
CTAGTATCCTTTAGTCTAGTGTTTATGCTGTGTTTGACACATCTAAACAAACAGTGCTGC
TATGCTTATGCAAAAAGCTGTTCTTTGCACATTAGTGAATATGGATGGACTTGACCATTT
CCAATGTACCCAGGAATTCTCCAGCTGTGTTTCTTCTATCATCTATGTAACTGTTGCTAA
TGTGTATTGACAGCTTGAAAGCCAACTTTATTCTGAATGTCATCTCGTCATTTCACGGC